TF Information

Bra022780 *(Brassica rapa)* LOB
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03195 (DUF260)	IPR004883	Bra022780	T245065_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
LBD4 M02261_2.00	Arabidopsis thaliana	VDNVCGSNNN	NNNSCGBNHB	PBM Weirauch et al.(2014) pTH7515	0.758	0.758
gw1.238.28.1 M02262_2.00	Physcomitrella patens	NNNNNVNGSN	NSCNBNNNNN	PBM Weirauch et al.(2014) pTH8459	0.758	0.758
LOB M06966_2.00	Arabidopsis thaliana	NVCGGCGGHRRHDRMGGMGGH	DCCKCCKYHDYYDCCGCCGBN	Dap-seq OMalley et al.(2016) LOB_col_a	0.717	0.717
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Bra022780.1-P	LOB	8	106	PCASCKLLRRRCAKECIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSLVFEANARVRDPVYGCVGAISYLQNQVTQLQMQLAVAQT

Links
Other LOB family TFs
Other *Brassica rapa* TFs

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307 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action