CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI1G14677
(
Brachypodium distachyon
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
BRADI1G14677
T245095_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI1G14677.1
LOB
7
105
PCAACKLLRRKCTQGCVFAPYFPPDQPARFANVHKVFGASNVSKLLNDLPQAQREDAVNSLAYEAEARLRDPVYGCVAYISILQHRIKMVREEIVSTRK
Links
Other
LOB
family TFs
Other
Brachypodium distachyon
TFs
95 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_33210
Aegilops tauschii
F775_33210
I
0.945
Traes_4BS_C1F4F41E9
Triticum aestivum
Traes_4BS_C1F4F41E9
I
0.899
Traes_4DS_72ABC3EE5
Triticum aestivum
Traes_4DS_72ABC3EE5
I
0.899
OGLUM03G26820
Oryza glumaepatula
OGLUM03G26820
I
0.889
ORGLA03G0240600
Oryza glaberrima
ORGLA03G0240600
I
0.889
OS03G0612400
Oryza sativa
OS03G0612400
I
0.889
Traes_4AL_C060BF9F6
Triticum aestivum
Traes_4AL_C060BF9F6
I
0.889
OB03G34080
Oryza brachyantha
OB03G34080
I
0.889
ORUFI03G26840
Oryza rufipogon
ORUFI03G26840
I
0.889
ONIVA11G15310
Oryza nivara
ONIVA11G15310
I
0.889
BGIOSGA013119
Oryza indica
BGIOSGA013119
I
0.889
LPERR03G21590
Leersia perrieri
LPERR03G21590
I
0.869
Si036905m.g
Setaria italica
Si036905m.g
I
0.859
Pavir.J09541
Panicum virgatum
Pavir.J09541
I
0.859
Sb01g014650
Sorghum bicolor
Sb01g014650
I
0.848
Pavir.Ib03943
Panicum virgatum
Pavir.Ib03943
I
0.848
TRIUR3_06488
Triticum urartu
TRIUR3_06488
I
0.844
GRMZM2G154320
Zea mays
GRMZM2G154320
N
0.828
GRMZM2G362627
Zea mays
GRMZM2G362627
I
0.818
PK13228.1
Cannabis sativa
PK13228.1
I
0.812
PK18922.1
Cannabis sativa
PK18922.1
I
0.807
VIT_07s0197g00020
Vitis vinifera
VIT_07s0197g00020
I
0.798
VIT_00s1247g00010
Vitis vinifera
VIT_00s1247g00010
I
0.798
VIT_00s0215g00010
Vitis vinifera
VIT_00s0215g00010
I
0.796
Aquca_007_00083
Aquilegia coerulea
Aquca_007_00083
I
0.788
orange1.1g039589m.g
Citrus sinensis
orange1.1g039589m.g
I
0.788
Ciclev10027275m.g
Citrus clementina
Ciclev10027275m.g
I
0.788
SapurV1A.0641s0140
Salix purpurea
SapurV1A.0641s0140
I
0.778
29676.m001633
Ricinus communis
29676.m001633
I
0.778
gene24088-v1.0-hybrid
Fragaria vesca
gene24088-v1.0-hybrid
I
0.778
cassava32690.m1
Manihot esculenta
cassava32690.m1
I
0.778
SapurV1A.0811s0020
Salix purpurea
SapurV1A.0811s0020
I
0.778
AMTR_s00066p00120340
Amborella trichopoda
AMTR_s00066p00120340
I
0.768
SapurV1A.0428s0090
Salix purpurea
SapurV1A.0428s0090
I
0.768
LBD36
Arabidopsis thaliana
AT5G66870
I
0.768
GLYMA06G11181
Glycine max
GLYMA06G11181
I
0.768
Pm026450
Prunus mume
Pm026450
I
0.768
mgf004296m
Mimulus guttatus
mgf004296m
I
0.768
TCM_000560
Theobroma cacao
TCM_000560
I
0.768
POPTR_0005s14150
Populus trichocarpa
POPTR_0005s14150
I
0.768
POPTR_0007s11460
Populus trichocarpa
POPTR_0007s11460
I
0.768
PRUPE_ppa026393mg
Prunus persica
PRUPE_ppa026393mg
I
0.768
evm.TU.supercontig_331.6
Carica papaya
evm.TU.supercontig_331.6
I
0.766
Carubv10026811m.g
Capsella rubella
Carubv10026811m.g
I
0.758
Gorai.011G104600
Gossypium raimondii
Gorai.011G104600
I
0.758
Cagra.20099s0001
Capsella grandiflora
Cagra.20099s0001
I
0.758
Gorai.007G210500
Gossypium raimondii
Gorai.007G210500
I
0.758
Bostr.0568s0111
Boechera stricta
Bostr.0568s0111
I
0.758
Solyc02g090410.2
Solanum lycopersicum
Solyc02g090410.2
I
0.758
GLYMA04G11991
Glycine max
GLYMA04G11991
I
0.758
Bo2g167820
Brassica oleracea
Bo2g167820
I
0.758
PGSC0003DMG402000764
Solanum tuberosum
PGSC0003DMG402000764
I
0.758
Thhalv10004535m.g
Eutrema salsugineum
Thhalv10004535m.g
I
0.758
Solyc02g065150.1
Solanum lycopersicum
Solyc02g065150.1
I
0.758
evm.TU.supercontig_6.423
Carica papaya
evm.TU.supercontig_6.423
I
0.747
Cucsa.250570
Cucumis sativus
Cucsa.250570
I
0.747
ASL1
Arabidopsis lyrata
fgenesh2_kg.8__2729__AT5G66870.1
I
0.747
cassava16846.m1
Manihot esculenta
cassava16846.m1
I
0.747
GSMUA_Achr6G04670_001
Musa acuminata
GSMUA_Achr6G04670_001
I
0.747
MDP0000777060
Malus domestica
MDP0000777060
I
0.747
Traes_1DL_1290B6A52
Triticum aestivum
Traes_1DL_1290B6A52
I
0.738
BGIOSGA002306
Oryza indica
BGIOSGA002306
I
0.738
chr2.LjT16G06.10.nd
Lotus japonicus
chr2.LjT16G06.10.nd
I
0.737
Lus10005313.g
Linum usitatissimum
Lus10005313.g
I
0.737
GLYMA01G39060
Glycine max
GLYMA01G39060
I
0.737
GLYMA11G06210
Glycine max
GLYMA11G06210
I
0.737
PGSC0003DMG401000764
Solanum tuberosum
PGSC0003DMG401000764
I
0.737
Cla020438
Citrullus lanatus
Cla020438
I
0.737
MDP0000562305
Malus domestica
MDP0000562305
I
0.737
PGSC0003DMG400010023
Solanum tuberosum
PGSC0003DMG400010023
I
0.737
PK29334.1
Cannabis sativa
PK29334.1
I
0.734
orange1.1g027472m.g
Citrus sinensis
orange1.1g027472m.g
I
0.727
Lus10016769.g
Linum usitatissimum
Lus10016769.g
I
0.727
MDP0000310871
Malus domestica
MDP0000310871
I
0.727
Lus10022463.g
Linum usitatissimum
Lus10022463.g
I
0.727
VIT_07s0197g00030
Vitis vinifera
VIT_07s0197g00030
I
0.727
VIT_07s0197g00040
Vitis vinifera
VIT_07s0197g00040
I
0.727
MTR_5g017950
Medicago truncatula
MTR_5g017950
I
0.727
Ciclev10017910m.g
Citrus clementina
Ciclev10017910m.g
I
0.727
cassava32691.m1
Manihot esculenta
cassava32691.m1
I
0.727
Bo7g064360
Brassica oleracea
Bo7g064360
I
0.727
Bra012112
Brassica rapa
Bra012112
I
0.727
GSMUA_Achr2G13400_001
Musa acuminata
GSMUA_Achr2G13400_001
I
0.725
PRUPE_ppa015145mg
Prunus persica
PRUPE_ppa015145mg
I
0.717
PK21617.1
Cannabis sativa
PK21617.1
I
0.717
VIT_16s0022g02050
Vitis vinifera
VIT_16s0022g02050
I
0.717
MDP0000197526
Malus domestica
MDP0000197526
I
0.717
Gorai.008G073400
Gossypium raimondii
Gorai.008G073400
I
0.717
Pm010483
Prunus mume
Pm010483
I
0.717
Ca_02124
Cicer arietinum
Ca_02124
I
0.707
gene30401-v1.0-hybrid
Fragaria vesca
gene30401-v1.0-hybrid
I
0.707
cassava16840.m1
Manihot esculenta
cassava16840.m1
I
0.707
GLYMA05G09950
Glycine max
GLYMA05G09950
I
0.707
Ca_11161
Cicer arietinum
Ca_11161
I
0.707
GSMUA_Achr7G23710_001
Musa acuminata
GSMUA_Achr7G23710_001
I
0.700