BRADI2G53690 (Brachypodium distachyon)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 BRADI2G53690 T245108_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LBD13
M06956_2.00
Arabidopsis thaliana
YGSCGDNDDHNVCGGHG

CDCCGBNDHHNHCGSCR
Dap-seq
OMalley et al.(2016)
LBD13_col_a
0.818 0.818
LBD13
M06957_2.00
Arabidopsis thaliana
CGSCGNNDDWNNCGG

CCGNNWHHNNCGSCG
Dap-seq
OMalley et al.(2016)
LBD13_colamp_a
0.818 0.818
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI2G53690.1 LOB 57 155

Links

Other LOB family TFs
Other Brachypodium distachyon TFs

177 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MLOC_16076 Hordeum vulgare MLOC_16076 I 0.949
F775_25790 Aegilops tauschii F775_25790 I 0.939
TRIUR3_34193 Triticum urartu TRIUR3_34193 I 0.939
ONIVA01G40640 Oryza nivara ONIVA01G40640 I 0.929
OS01G0825000 Oryza sativa OS01G0825000 I 0.929
ORUFI01G39050 Oryza rufipogon ORUFI01G39050 I 0.929
Si004575m.g Setaria italica Si004575m.g I 0.929
LPERR01G30700 Leersia perrieri LPERR01G30700 I 0.929
OMERI01G32750 Oryza meridionalis OMERI01G32750 I 0.929
OLONG_000658 Oryza longistaminata OLONG_000658 I 0.929
OBART01G35680 Oryza barthii OBART01G35680 I 0.929
BGIOSGA004719 Oryza indica BGIOSGA004719 I 0.929
OGLUM01G39690 Oryza glumaepatula OGLUM01G39690 I 0.929
ORGLA01G0294900 Oryza glaberrima ORGLA01G0294900 I 0.929
OB01G44400 Oryza brachyantha OB01G44400 I 0.919
OPUNC01G34540 Oryza punctata OPUNC01G34540 I 0.919
Pavir.Eb03580 Panicum virgatum Pavir.Eb03580 I 0.919
TRAES3BF078900060CFD_g Triticum aestivum TRAES3BF078900060CFD_g I 0.919
PK21617.1 Cannabis sativa PK21617.1 I 0.913
Pavir.Ea03276 Panicum virgatum Pavir.Ea03276 I 0.909
GRMZM2G092517 Zea mays GRMZM2G092517 I 0.909
Sb03g038410 Sorghum bicolor Sb03g038410 I 0.909
OB05G14280 Oryza brachyantha OB05G14280 I 0.885
GSMUA_Achr11G08330_001 Musa acuminata GSMUA_Achr11G08330_001 I 0.879
BGIOSGA018747 Oryza indica BGIOSGA018747 I 0.879
ONIVA05G04920 Oryza nivara ONIVA05G04920 I 0.879
OBART05G04570 Oryza barthii OBART05G04570 I 0.879
OGLUM05G04450 Oryza glumaepatula OGLUM05G04450 I 0.879
ORGLA05G0042200 Oryza glaberrima ORGLA05G0042200 I 0.879
OMERI05G04500 Oryza meridionalis OMERI05G04500 I 0.879
OS05G0165450 Oryza sativa OS05G0165450 I 0.879
ORUFI05G04770 Oryza rufipogon ORUFI05G04770 I 0.879
LPERR05G04040 Leersia perrieri LPERR05G04040 I 0.869
Traes_1BS_8F922CA93 Triticum aestivum Traes_1BS_8F922CA93 I 0.869
Traes_1AS_43FB6A3CF Triticum aestivum Traes_1AS_43FB6A3CF I 0.869
Traes_1DS_BB8508CC6 Triticum aestivum Traes_1DS_BB8508CC6 I 0.869
MLOC_56075 Hordeum vulgare MLOC_56075 I 0.869
GLYMA14G38280 Glycine max GLYMA14G38280 I 0.869
F775_52636 Aegilops tauschii F775_52636 I 0.869
Si012018m.g Setaria italica Si012018m.g I 0.869
TRIUR3_18328 Triticum urartu TRIUR3_18328 I 0.863
GSMUA_Achr7G22200_001 Musa acuminata GSMUA_Achr7G22200_001 I 0.859
Aquca_005_00169 Aquilegia coerulea Aquca_005_00169 I 0.859
TCM_045438 Theobroma cacao TCM_045438 I 0.859
LBD15 Arabidopsis thaliana AT2G40470 I 0.859
evm.TU.supercontig_2.327 Carica papaya evm.TU.supercontig_2.327 I 0.859
LBD15 Vitis vinifera VIT_13s0067g02380 I 0.859
cassava15554.m1 Manihot esculenta cassava15554.m1 I 0.859
PK17217.1 Cannabis sativa PK17217.1 I 0.859
cassava20848.m1 Manihot esculenta cassava20848.m1 I 0.859
LBD15 Arabidopsis lyrata fgenesh2_kg.4__2164__AT2G40470.1 I 0.859
Bostr.23794s0013 Boechera stricta Bostr.23794s0013 I 0.859
Pavir.J00291 Panicum virgatum Pavir.J00291 I 0.859
Gorai.009G295000 Gossypium raimondii Gorai.009G295000 I 0.859
Carubv10024002m.g Capsella rubella Carubv10024002m.g I 0.859
TCM_042262 Theobroma cacao TCM_042262 I 0.859
Sb09g004940 Sorghum bicolor Sb09g004940 I 0.859
Cagra.1642s0010 Capsella grandiflora Cagra.1642s0010 I 0.859
MTR_5g075020 Medicago truncatula MTR_5g075020 I 0.859
AMTR_s00007p00227160 Amborella trichopoda AMTR_s00007p00227160 I 0.859
Thhalv10017905m.g Eutrema salsugineum Thhalv10017905m.g I 0.848
29729.m002335 Ricinus communis 29729.m002335 I 0.848
POPTR_0013s08040 Populus trichocarpa POPTR_0013s08040 I 0.848
PRUPE_ppa011757mg Prunus persica PRUPE_ppa011757mg I 0.848
Bo3g034980 Brassica oleracea Bo3g034980 I 0.848
Bo4g012620 Brassica oleracea Bo4g012620 I 0.848
Ca_15642 Cicer arietinum Ca_15642 I 0.848
mgf011471m Mimulus guttatus mgf011471m I 0.848
GLYMA06G15050 Glycine max GLYMA06G15050 I 0.848
GLYMA04G39830 Glycine max GLYMA04G39830 I 0.848
evm.TU.supercontig_19.92 Carica papaya evm.TU.supercontig_19.92 I 0.848
Gorai.003G151800 Gossypium raimondii Gorai.003G151800 I 0.848
GRMZM5G868471 Zea mays GRMZM5G868471 I 0.848
GLYMA02G40080 Glycine max GLYMA02G40080 I 0.848
Lus10009930.g Linum usitatissimum Lus10009930.g I 0.848
Bra004572 Brassica rapa Bra004572 I 0.848
Bra000188 Brassica rapa Bra000188 I 0.848
Pavir.Ca01098 Panicum virgatum Pavir.Ca01098 I 0.848
BRADI2G34520 Brachypodium distachyon BRADI2G34520 I 0.848
Lus10024183.g Linum usitatissimum Lus10024183.g I 0.848
Bo4g190210 Brassica oleracea Bo4g190210 I 0.848
Eucgr.G03121 Eucalyptus grandis Eucgr.G03121 I 0.838
chr2.CM1032.110.nc Lotus japonicus chr2.CM1032.110.nc I 0.838
Gorai.013G005900 Gossypium raimondii Gorai.013G005900 I 0.838
Gorai.012G015900 Gossypium raimondii Gorai.012G015900 I 0.838
gene21311-v1.0-hybrid Fragaria vesca gene21311-v1.0-hybrid I 0.838
Cla007391 Citrullus lanatus Cla007391 I 0.838
Solyc06g050430.2 Solanum lycopersicum Solyc06g050430.2 I 0.838
PGSC0003DMG400029080 Solanum tuberosum PGSC0003DMG400029080 I 0.838
GSMUA_AchrUn_randomG14060_001 Musa acuminata GSMUA_AchrUn_randomG14060_001 I 0.838
MDP0000278334 Malus domestica MDP0000278334 I 0.828
mgf020556m Mimulus guttatus mgf020556m I 0.828
Ca_04126 Cicer arietinum Ca_04126 I 0.828
LBD13 Arabidopsis lyrata fgenesh2_kg.4__1005__AT2G30340.1 I 0.828
GSMUA_Achr5G07460_001 Musa acuminata GSMUA_Achr5G07460_001 I 0.828
MTR_5g083960 Medicago truncatula MTR_5g083960 I 0.828
Ciclev10032684m.g Citrus clementina Ciclev10032684m.g I 0.828
Eucgr.B04019 Eucalyptus grandis Eucgr.B04019 I 0.828
Bra021627 Brassica rapa Bra021627 I 0.828
29957.m001411 Ricinus communis 29957.m001411 I 0.828
orange1.1g027307m.g Citrus sinensis orange1.1g027307m.g I 0.828
POPTR_0019s14790 Populus trichocarpa POPTR_0019s14790 I 0.828
chr1.CM0125.30.nd Lotus japonicus chr1.CM0125.30.nd I 0.828
SapurV1A.0215s0070 Salix purpurea SapurV1A.0215s0070 I 0.828
Bra016992 Brassica rapa Bra016992 I 0.828
Bo4g172950 Brassica oleracea Bo4g172950 I 0.828
LjSGA_040320.1 Lotus japonicus LjSGA_040320.1 I 0.824
MDP0000167580 Malus domestica MDP0000167580 I 0.820
LBD13 Arabidopsis thaliana AT2G30340 D 0.818
Bostr.24513s0205 Boechera stricta Bostr.24513s0205 I 0.818
Ciclev10002348m.g Citrus clementina Ciclev10002348m.g I 0.818
Cagra.0567s0001 Capsella grandiflora Cagra.0567s0001 I 0.818
Thhalv10017073m.g Eutrema salsugineum Thhalv10017073m.g I 0.818
SapurV1A.0222s0070 Salix purpurea SapurV1A.0222s0070 I 0.818
Bra018320 Brassica rapa Bra018320 I 0.818
gene28137-v1.0-hybrid Fragaria vesca gene28137-v1.0-hybrid I 0.818
orange1.1g028221m.g Citrus sinensis orange1.1g028221m.g I 0.818
Bo4g059520 Brassica oleracea Bo4g059520 I 0.818
Solyc06g007390.2 Solanum lycopersicum Solyc06g007390.2 I 0.818
MTR_3g094690 Medicago truncatula MTR_3g094690 I 0.818
Cucsa.144080 Cucumis sativus Cucsa.144080 I 0.818
POPTR_0013s15220 Populus trichocarpa POPTR_0013s15220 I 0.818
PRUPE_ppa019397mg Prunus persica PRUPE_ppa019397mg I 0.818
gw1.156.75.1 Physcomitrella patens gw1.156.75.1 I 0.818
Pm000277 Prunus mume Pm000277 I 0.818
PK05388.1 Cannabis sativa PK05388.1 I 0.810
evm.TU.supercontig_331.6 Carica papaya evm.TU.supercontig_331.6 I 0.809
PGSC0003DMG400020562 Solanum tuberosum PGSC0003DMG400020562 I 0.808
LBD13 Vitis vinifera VIT_06s0004g07790 I 0.808
SELMODRAFT_26920 Selaginella moellendorffii SELMODRAFT_26920 I 0.808
Solyc06g082430.1 Solanum lycopersicum Solyc06g082430.1 I 0.808
SELMODRAFT_37169 Selaginella moellendorffii SELMODRAFT_37169 I 0.808
Ca_12420 Cicer arietinum Ca_12420 I 0.808
Carubv10024870m.g Capsella rubella Carubv10024870m.g I 0.808
gw1.9.232.1 Physcomitrella patens gw1.9.232.1 I 0.808
cassava31953.m1 Manihot esculenta cassava31953.m1 I 0.798
PGSC0003DMG400030461 Solanum tuberosum PGSC0003DMG400030461 I 0.798
Cucsa.326100 Cucumis sativus Cucsa.326100 I 0.788
Pm019028 Prunus mume Pm019028 I 0.782
PDK_20s1387061g002 Phoenix dactylifera PDK_20s1387061g002 I 0.778
Lus10034208.g Linum usitatissimum Lus10034208.g I 0.778
Lus10029061.g Linum usitatissimum Lus10029061.g I 0.778
PK03716.1 Cannabis sativa PK03716.1 I 0.765
Bo4g190140 Brassica oleracea Bo4g190140 I 0.763
OLONG_007328 Oryza longistaminata OLONG_007328 I 0.758
PDK_20s1448121g001 Phoenix dactylifera PDK_20s1448121g001 N 0.746
PDK_20s1537041g001 Phoenix dactylifera PDK_20s1537041g001 N 0.746
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I 0.737
Si037583m.g Setaria italica Si037583m.g I 0.737
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I 0.737
ORUFI03G29410 Oryza rufipogon ORUFI03G29410 I 0.727
BGIOSGA013249 Oryza indica BGIOSGA013249 I 0.727
OMERI03G24920 Oryza meridionalis OMERI03G24920 I 0.727
Sb01g012810 Sorghum bicolor Sb01g012810 I 0.727
ONIVA03G29300 Oryza nivara ONIVA03G29300 I 0.727
OGLUM04G05130 Oryza glumaepatula OGLUM04G05130 I 0.727
GRMZM2G079185 Zea mays GRMZM2G079185 I 0.727
mgf026046m Mimulus guttatus mgf026046m I 0.727
GRMZM2G025989 Zea mays GRMZM2G025989 I 0.723
PK29334.1 Cannabis sativa PK29334.1 I 0.719
F775_33210 Aegilops tauschii F775_33210 I 0.712
cassava27818.m1 Manihot esculenta cassava27818.m1 I 0.707
evm.TU.supercontig_2.374 Carica papaya evm.TU.supercontig_2.374 I 0.707
Si026864m.g Setaria italica Si026864m.g I 0.707
GRMZM2G447176 Zea mays GRMZM2G447176 I 0.707
MTR_5g083230 Medicago truncatula MTR_5g083230 I 0.707
Pavir.J18260 Panicum virgatum Pavir.J18260 I 0.707
LBD3 Vitis vinifera VIT_19s0027g01120 I 0.707
PGSC0003DMG400021204 Solanum tuberosum PGSC0003DMG400021204 I 0.707
F775_24149 Aegilops tauschii F775_24149 I 0.707
Lus10031769.g Linum usitatissimum Lus10031769.g I 0.707
OPUNC03G25820 Oryza punctata OPUNC03G25820 I 0.707
Pavir.J06256 Panicum virgatum Pavir.J06256 I 0.707
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.707
Lus10031191.g Linum usitatissimum Lus10031191.g I 0.707
Pavir.J13923 Panicum virgatum Pavir.J13923 I 0.707
TRIUR3_27421 Triticum urartu TRIUR3_27421 I 0.707