LBD31 (Arabidopsis lyrata)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 fgenesh1_pm.C_scaffold_6002970 T245153_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_scaffold_6002970 LOB 11 111

Links

Other LOB family TFs
Other Arabidopsis lyrata TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.14547s0030 Boechera stricta Bostr.14547s0030 I 0.838
LBD31 Arabidopsis thaliana AT4G00210 I 0.838
Carubv10002489m.g Capsella rubella Carubv10002489m.g I 0.838
Cagra.1261s0013 Capsella grandiflora Cagra.1261s0013 I 0.828
Thhalv10028924m.g Eutrema salsugineum Thhalv10028924m.g I 0.808
Bra037322 Brassica rapa Bra037322 I 0.758
Bo9g002150 Brassica oleracea Bo9g002150 I 0.758
MLOC_55239 Hordeum vulgare MLOC_55239 I 0.745
chr3.LjT44N20.90.nd Lotus japonicus chr3.LjT44N20.90.nd I 0.737
orange1.1g041368m.g Citrus sinensis orange1.1g041368m.g I 0.736
PGSC0003DMG402012772 Solanum tuberosum PGSC0003DMG402012772 I 0.734
GLYMA01G34523 Glycine max GLYMA01G34523 I 0.727
chr1.CM1255.90.nc Lotus japonicus chr1.CM1255.90.nc N 0.727
MTR_8g036105 Medicago truncatula MTR_8g036105 I 0.727
mgf020735m Mimulus guttatus mgf020735m I 0.717
GLYMA03G02631 Glycine max GLYMA03G02631 I 0.717
VIT_15s0048g00840 Vitis vinifera VIT_15s0048g00840 I 0.717
Lus10009298.g Linum usitatissimum Lus10009298.g I 0.717
Ca_19598 Cicer arietinum Ca_19598 I 0.717
OLONG_028429 Oryza longistaminata OLONG_028429 I 0.717
POPTR_0002s14980 Populus trichocarpa POPTR_0002s14980 I 0.713
ORGLA10G0025200 Oryza glaberrima ORGLA10G0025200 I 0.707
evm.TU.supercontig_18.117 Carica papaya evm.TU.supercontig_18.117 I 0.707
OPUNC10G02630 Oryza punctata OPUNC10G02630 I 0.707
SapurV1A.0024s0790 Salix purpurea SapurV1A.0024s0790 I 0.707
PK25573.1 Cannabis sativa PK25573.1 I 0.707
ONIVA10G03250 Oryza nivara ONIVA10G03250 I 0.707
Eucgr.E01415 Eucalyptus grandis Eucgr.E01415 I 0.707
ORUFI10G03180 Oryza rufipogon ORUFI10G03180 I 0.707
AMTR_s00041p00044170 Amborella trichopoda AMTR_s00041p00044170 I 0.707
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I 0.707
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I 0.707
BGIOSGA032254 Oryza indica BGIOSGA032254 I 0.707
OGLUM10G03230 Oryza glumaepatula OGLUM10G03230 I 0.707
OB10G12360 Oryza brachyantha OB10G12360 I 0.707
OS10G0162600 Oryza sativa OS10G0162600 I 0.707
GSMUA_Achr2G11240_001 Musa acuminata GSMUA_Achr2G11240_001 I 0.707
gw1.42.84.1 Physcomitrella patens gw1.42.84.1 I 0.701