GLYMA03G02631 (Glycine max)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 GLYMA03G02631 T245184_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LBD19
M06960_2.00
Arabidopsis thaliana
CCKKAAAWHMMGSND

HNSCKKDWTTTMMGG
Dap-seq
OMalley et al.(2016)
LBD19_col_a
0.838 0.838
LBD19
M06961_2.00
Arabidopsis thaliana
WWYCCGG

CCGGRWW
Dap-seq
OMalley et al.(2016)
LBD19_colamp_a
0.838 0.838
LBD18
M06962_2.00
Arabidopsis thaliana
SCGGRRAWHVHGSMRNNDN

NHNNYKSCDBDWTYYCCGS
Dap-seq
OMalley et al.(2016)
LBD18_col_a
0.788 0.788
LBD18
M06963_2.00
Arabidopsis thaliana
CDBDWTTTMHGSHRN

NYDSCDKAAAWHVHG
Dap-seq
OMalley et al.(2016)
LBD18_colamp_a
0.788 0.788
LBD30
M01066_2.00
Arabidopsis thaliana
BVWWWHVNGG

CCNBDWWWBV
PBM
Sullivan et al.(2014)
pTH7467
0.747 0.747
LBD30
M01067_2.00
Arabidopsis thaliana
VWWWNVNGGD

HCCNBNWWWB
PBM
Sullivan et al.(2014)
pTH7616
0.747 0.747
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA03G02631.1 LOB 18 117

Links

Other LOB family TFs
Other Glycine max TFs

218 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCFL5 Homo sapiens ENSG00000101190 D 0.000
Tcfl5 Mus musculus ENSMUSG00000038932 D 0.000
ENSTGUG00000007614 Taeniopygia guttata ENSTGUG00000007614 I 0.000
ENSSTOG00000026350 Ictidomys tridecemlineatus ENSSTOG00000026350 I 0.000
ENSSHAG00000009928 Sarcophilus harrisii ENSSHAG00000009928 I 0.000
Tcfl5 Rattus norvegicus ENSRNOG00000061199 I 0.000
TCFL5 Pan troglodytes ENSPTRG00000023366 I 0.000
ENSPSIG00000005171 Pelodiscus sinensis ENSPSIG00000005171 I 0.000
ENSPANG00000021056 Papio anubis ENSPANG00000021056 I 0.000
ENSOGAG00000013819 Otolemur garnettii ENSOGAG00000013819 I 0.000
ENSOCUG00000021283 Oryctolagus cuniculus ENSOCUG00000021283 I 0.000
Tal_R005586 Tyto alba Tal_R005586 I 0.000
TCFL5 Tursiops truncatus ENSTTRG00000001783 I 0.000
Aan_R015750 Calypte anna Aan_R015750 I 0.000
Pvit_13880 Pogona vitticeps Pvit_13880 I 0.000
Ogr12487 Ophisaurus gracilis Ogr12487 I 0.000
Myotis_brandtii_TCFL5_10023483 Myotis brandtii Myotis_brandtii_TCFL5_10023483 I 0.000
Gfo_R005253 Geospiza fortis Gfo_R005253 I 0.000
ENSP00000334294 Macaca fascicularis ENSP00000334294 I 0.000
ENSP00000334294-D1 Bos grunniens ENSP00000334294-D1 I 0.000
Brh_R002477 Buceros rhinoceros Brh_R002477 I 0.000
Alligator_sinensis_CCG018566.1 Alligator sinensis Alligator_sinensis_CCG018566.1 I 0.000
Afo_R010909 Aptenodytes forsteri Afo_R010909 I 0.000
ENSOARG00000012065 Ovis aries ENSOARG00000012065 I 0.000
TCFL5 Ornithorhynchus anatinus ENSOANG00000004974 I 0.000
ENSNLEG00000000425 Nomascus leucogenys ENSNLEG00000000425 I 0.000
ENSFALG00000010492 Ficedula albicollis ENSFALG00000010492 I 0.000
ENSEEUG00000011395 Erinaceus europaeus ENSEEUG00000011395 I 0.000
ENSDORG00000004511 Dipodomys ordii ENSDORG00000004511 I 0.000
ENSDNOG00000044739 Dasypus novemcinctus ENSDNOG00000044739 I 0.000
ENSCSAG00000016203 Chlorocebus sabaeus ENSCSAG00000016203 I 0.000
ENSCPOG00000020307 Cavia porcellus ENSCPOG00000020307 I 0.000
TCFL5 Callithrix jacchus ENSCJAG00000009980 I 0.000
TCFL5 Canis familiaris ENSCAFG00000024809 I 0.000
ENSAPLG00000003283 Anas platyrhynchos ENSAPLG00000003283 I 0.000
ENSFCAG00000024469 Felis catus ENSFCAG00000024469 I 0.000
ENSGALG00000005635 Gallus gallus ENSGALG00000005635 I 0.000
ENSMPUG00000008000 Mustela putorius furo ENSMPUG00000008000 I 0.000
TCFL5 Monodelphis domestica ENSMODG00000016827 I 0.000
TCFL5 Macaca mulatta ENSMMUG00000008229 I 0.000
ENSMLUG00000016355 Myotis lucifugus ENSMLUG00000016355 I 0.000
ENSMEUG00000001633 Macropus eugenii ENSMEUG00000001633 I 0.000
ENSLOCG00000003908 Lepisosteus oculatus ENSLOCG00000003908 I 0.000
ENSLAFG00000014903 Loxodonta africana ENSLAFG00000014903 I 0.000
ENSLACG00000016963 Latimeria chalumnae ENSLACG00000016963 I 0.000
TCFL5 Gorilla gorilla ENSGGOG00000017041 I 0.000
TCFL5 Anolis carolinensis ENSACAG00000005435 I 0.000