GLYMA13G18191 (Glycine max)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 GLYMA13G18191 T245226_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD16
M00870_2.00 		Arabidopsis thaliana
DNHHYVCGG
CCGBRDDNH		 PBM
Franco-Zorrilla et al.(2014)
LBD16 		0.859 0.859
LBD16
M06958_2.00 		Arabidopsis thaliana
SCGGAAAWNVCGSMR
YKSCGBNWTTTCCGS		 Dap-seq
OMalley et al.(2016)
ASL18_col_a 		0.859 0.859
LBD16
M06959_2.00 		Arabidopsis thaliana
SCDBDWTTYVCGSHDN
NHDSCGBRAAWHVHGS		 Dap-seq
OMalley et al.(2016)
ASL18_colamp_a 		0.859 0.859
LBD18
M06962_2.00 		Arabidopsis thaliana
SCGGRRAWHVHGSMRNNDN
NHNNYKSCDBDWTYYCCGS		 Dap-seq
OMalley et al.(2016)
LBD18_col_a 		0.737 0.737
LBD18
M06963_2.00 		Arabidopsis thaliana
CDBDWTTTMHGSHRN
NYDSCDKAAAWHVHG		 Dap-seq
OMalley et al.(2016)
LBD18_colamp_a 		0.737 0.737
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA13G18191.1 LOB 21 120

Links

Other LOB family TFs
Other Glycine max TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA10G04040 Glycine max GLYMA10G04040 I 0.919
GLYMA19G34590 Glycine max GLYMA19G34590 I 0.889
Cagra.2636s0029 Capsella grandiflora Cagra.2636s0029 I 0.869
Bostr.25993s0538 Boechera stricta Bostr.25993s0538 I 0.869
Bra004693 Brassica rapa Bra004693 I 0.869
Carubv10025548m.g Capsella rubella Carubv10025548m.g I 0.869
evm.TU.supercontig_50.43 Carica papaya evm.TU.supercontig_50.43 I 0.869
Bra016877 Brassica rapa Bra016877 I 0.869
MTR_7g096530 Medicago truncatula MTR_7g096530 I 0.869
Bo4g191530 Brassica oleracea Bo4g191530 I 0.869
Bo4g016000 Brassica oleracea Bo4g016000 I 0.869
TCM_004106 Theobroma cacao TCM_004106 I 0.869
Thhalv10017158m.g Eutrema salsugineum Thhalv10017158m.g I 0.869
Ca_12213 Cicer arietinum Ca_12213 I 0.869
Gorai.001G251600 Gossypium raimondii Gorai.001G251600 I 0.859
SapurV1A.0378s0180 Salix purpurea SapurV1A.0378s0180 I 0.859
MDP0000145761 Malus domestica MDP0000145761 I 0.859
LBD16 Arabidopsis lyrata scaffold_403099.1 I 0.859
LBD16 Arabidopsis thaliana AT2G42430 D 0.859
GLYMA03G31830 Glycine max GLYMA03G31830 I 0.848
Pm020629 Prunus mume Pm020629 I 0.848
gene08250-v1.0-hybrid Fragaria vesca gene08250-v1.0-hybrid I 0.848
Bra000257 Brassica rapa Bra000257 I 0.848
Bo3g036030 Brassica oleracea Bo3g036030 I 0.848
Gorai.007G144400 Gossypium raimondii Gorai.007G144400 I 0.848
Gorai.004G073400 Gossypium raimondii Gorai.004G073400 I 0.848
MDP0000131964 Malus domestica MDP0000131964 I 0.838
LBD16 Vitis vinifera VIT_07s0005g03030 I 0.838
POPTR_0005s24320 Populus trichocarpa POPTR_0005s24320 I 0.838
29883.m002035 Ricinus communis 29883.m002035 I 0.838
orange1.1g040761m.g Citrus sinensis orange1.1g040761m.g I 0.838
Lus10024877.g Linum usitatissimum Lus10024877.g I 0.838
Aquca_034_00401 Aquilegia coerulea Aquca_034_00401 I 0.838
POPTR_0002s04210 Populus trichocarpa POPTR_0002s04210 I 0.838
PRUPE_ppa025349mg Prunus persica PRUPE_ppa025349mg I 0.838
Ciclev10024416m.g Citrus clementina Ciclev10024416m.g I 0.838
cassava15612.m1 Manihot esculenta cassava15612.m1 I 0.838
SapurV1A.0006s0980 Salix purpurea SapurV1A.0006s0980 I 0.828
Cla006088 Citrullus lanatus Cla006088 I 0.828
Cucsa.053440 Cucumis sativus Cucsa.053440 I 0.818
Lus10033872.g Linum usitatissimum Lus10033872.g I 0.808
Lus10000707.g Linum usitatissimum Lus10000707.g I 0.808
PDK_20s1428661g002 Phoenix dactylifera PDK_20s1428661g002 I 0.808
Solyc09g066260.2 Solanum lycopersicum Solyc09g066260.2 I 0.798
Bo3g036000 Brassica oleracea Bo3g036000 I 0.796
Gorai.004G219900 Gossypium raimondii Gorai.004G219900 I 0.788
PGSC0003DMG400009713 Solanum tuberosum PGSC0003DMG400009713 I 0.788
Eucgr.K03284 Eucalyptus grandis Eucgr.K03284 I 0.788
LjT35F15.70.nd Lotus japonicus LjT35F15.70.nd I 0.778
GSMUA_Achr3G27340_001 Musa acuminata GSMUA_Achr3G27340_001 I 0.778
Lus10014757.g Linum usitatissimum Lus10014757.g I 0.778
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I 0.768
Aquca_017_00683 Aquilegia coerulea Aquca_017_00683 I 0.768
PRUPE_ppa017589mg Prunus persica PRUPE_ppa017589mg I 0.768
TCM_005496 Theobroma cacao TCM_005496 I 0.761
gw1.42.84.1 Physcomitrella patens gw1.42.84.1 I 0.759
OS03G0246900 Oryza sativa OS03G0246900 I 0.758
Pavir.J34872 Panicum virgatum Pavir.J34872 I 0.758
GRMZM2G110913 Zea mays GRMZM2G110913 I 0.758
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I 0.758
OPUNC03G10080 Oryza punctata OPUNC03G10080 I 0.758
AMTR_s00041p00044170 Amborella trichopoda AMTR_s00041p00044170 I 0.758
Solyc01g091420.1 Solanum lycopersicum Solyc01g091420.1 I 0.758
OMERI03G09680 Oryza meridionalis OMERI03G09680 I 0.758
Pm017935 Prunus mume Pm017935 I 0.758
Sb01g041130 Sorghum bicolor Sb01g041130 I 0.758
30174.m008897 Ricinus communis 30174.m008897 I 0.758
BGIOSGA011118 Oryza indica BGIOSGA011118 I 0.758
chr5.CM0494.160.nd Lotus japonicus chr5.CM0494.160.nd I 0.758
cassava28672.m1 Manihot esculenta cassava28672.m1 I 0.758
Si019578m.g Setaria italica Si019578m.g I 0.758
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I 0.758
MTR_1g070220 Medicago truncatula MTR_1g070220 I 0.758
gene19356-v1.0-hybrid Fragaria vesca gene19356-v1.0-hybrid I 0.758
OBART03G10450 Oryza barthii OBART03G10450 I 0.758
MDP0000429067 Malus domestica MDP0000429067 I 0.758
LPERR03G09330 Leersia perrieri LPERR03G09330 I 0.758
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I 0.758
GSMUA_Achr5G13230_001 Musa acuminata GSMUA_Achr5G13230_001 I 0.758
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I 0.758
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I 0.758
OB02G44330 Oryza brachyantha OB02G44330 I 0.758
POPTR_0047s00280 Populus trichocarpa POPTR_0047s00280 I 0.756
PGSC0003DMG402012772 Solanum tuberosum PGSC0003DMG402012772 I 0.755
MLOC_55239 Hordeum vulgare MLOC_55239 I 0.755
GSMUA_Achr1G01350_001 Musa acuminata GSMUA_Achr1G01350_001 I 0.747
OMERI02G35350 Oryza meridionalis OMERI02G35350 I 0.747
ONIVA02G40360 Oryza nivara ONIVA02G40360 I 0.747
Pm017936 Prunus mume Pm017936 I 0.747
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I 0.747
GRMZM2G075499 Zea mays GRMZM2G075499 I 0.747
Cla007068 Citrullus lanatus Cla007068 I 0.747
Sb04g037550 Sorghum bicolor Sb04g037550 I 0.747
Pavir.Aa00097 Panicum virgatum Pavir.Aa00097 I 0.747
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I 0.747
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I 0.747
BGIOSGA005344 Oryza indica BGIOSGA005344 I 0.747
GRMZM2G150594 Zea mays GRMZM2G150594 I 0.747
Traes_4BL_3FB579782 Triticum aestivum Traes_4BL_3FB579782 I 0.747
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I 0.747
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I 0.747
OS02G0820500 Oryza sativa OS02G0820500 I 0.747
Pavir.J39638 Panicum virgatum Pavir.J39638 I 0.747
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I 0.747
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I 0.747
Cucsa.362840 Cucumis sativus Cucsa.362840 I 0.747
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I 0.747
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I 0.747
BRADI1G68170 Brachypodium distachyon BRADI1G68170 I 0.747
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I 0.747
cassava28659.m1 Manihot esculenta cassava28659.m1 I 0.747
gene19355-v1.0-hybrid Fragaria vesca gene19355-v1.0-hybrid I 0.747
30174.m008898 Ricinus communis 30174.m008898 I 0.747
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I 0.747
Carubv10018619m.g Capsella rubella Carubv10018619m.g I 0.737
BRADI3G22510 Brachypodium distachyon BRADI3G22510 I 0.737
TRIUR3_01477 Triticum urartu TRIUR3_01477 I 0.737
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I 0.737
Carubv10025050m.g Capsella rubella Carubv10025050m.g I 0.737
SapurV1A.0024s0780 Salix purpurea SapurV1A.0024s0780 I 0.737
Traes_6AL_D6045E37C Triticum aestivum Traes_6AL_D6045E37C I 0.737
Gorai.008G114400 Gossypium raimondii Gorai.008G114400 I 0.737
Bra040311 Brassica rapa Bra040311 I 0.737
cassava40137.m1 Manihot esculenta cassava40137.m1 I 0.737
Cla007069 Citrullus lanatus Cla007069 I 0.737
Bostr.25993s0233 Boechera stricta Bostr.25993s0233 I 0.737
Cagra.0698s0021 Capsella grandiflora Cagra.0698s0021 I 0.737
Gorai.004G161100 Gossypium raimondii Gorai.004G161100 I 0.737
LBD18 Arabidopsis lyrata fgenesh2_kg.4__2737__AT2G45420.1 I 0.737
Bo4g024620 Brassica oleracea Bo4g024620 I 0.737
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I 0.737
GSMUA_Achr2G11240_001 Musa acuminata GSMUA_Achr2G11240_001 I 0.737
MLOC_61947 Hordeum vulgare MLOC_61947 I 0.737
LBD18 Arabidopsis thaliana AT2G45420 D 0.737
OB10G12360 Oryza brachyantha OB10G12360 I 0.737
PK25573.1 Cannabis sativa PK25573.1 I 0.737
OPUNC02G34750 Oryza punctata OPUNC02G34750 I 0.737
POPTR_0014s06580 Populus trichocarpa POPTR_0014s06580 I 0.737
MLOC_10784 Hordeum vulgare MLOC_10784 I 0.737
Thhalv10001791m.g Eutrema salsugineum Thhalv10001791m.g I 0.737
TCM_005497 Theobroma cacao TCM_005497 I 0.737
LPERR02G31040 Leersia perrieri LPERR02G31040 I 0.737
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I 0.737
Bo4g195510 Brassica oleracea Bo4g195510 I 0.730
gw1.35.169.1 Physcomitrella patens gw1.35.169.1 I 0.727
Aquca_009_00560 Aquilegia coerulea Aquca_009_00560 I 0.727
Pavir.Ia02614 Panicum virgatum Pavir.Ia02614 I 0.727
Cagra.0686s0035 Capsella grandiflora Cagra.0686s0035 I 0.727
Gorai.004G073200 Gossypium raimondii Gorai.004G073200 I 0.727
Bo4g195520 Brassica oleracea Bo4g195520 I 0.727
Lus10009298.g Linum usitatissimum Lus10009298.g I 0.727
Bra004910 Brassica rapa Bra004910 I 0.727
PGSC0003DMG400020069 Solanum tuberosum PGSC0003DMG400020069 I 0.727
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I 0.727
mgf020735m Mimulus guttatus mgf020735m I 0.727
Solyc06g083930.1 Solanum lycopersicum Solyc06g083930.1 I 0.727
SapurV1A.0024s0790 Salix purpurea SapurV1A.0024s0790 I 0.727
Thhalv10006423m.g Eutrema salsugineum Thhalv10006423m.g I 0.727
LBD30 Vitis vinifera VIT_15s0048g00830 I 0.727
Traes_6DL_850266B2A Triticum aestivum Traes_6DL_850266B2A I 0.727
OB08G30680 Oryza brachyantha OB08G30680 I 0.717
Sb01g047000 Sorghum bicolor Sb01g047000 I 0.717
gene08254-v1.0-hybrid Fragaria vesca gene08254-v1.0-hybrid I 0.717
OMERI07G01660 Oryza meridionalis OMERI07G01660 I 0.717
BRADI3G55680 Brachypodium distachyon BRADI3G55680 I 0.717
evm.TU.supercontig_18.117 Carica papaya evm.TU.supercontig_18.117 I 0.717
OGLUM10G03230 Oryza glumaepatula OGLUM10G03230 I 0.717
OBART03G03830 Oryza barthii OBART03G03830 I 0.717
Si040019m.g Setaria italica Si040019m.g I 0.717
Sb01g046990 Sorghum bicolor Sb01g046990 I 0.717
OLONG_001985 Oryza longistaminata OLONG_001985 I 0.717
BGIOSGA032254 Oryza indica BGIOSGA032254 I 0.717
LBD20 Vitis vinifera VIT_08s0056g01650 I 0.717
LPERR03G03470 Leersia perrieri LPERR03G03470 I 0.717
GRMZM2G092542 Zea mays GRMZM2G092542 I 0.717
VIT_07s0005g03020 Vitis vinifera VIT_07s0005g03020 I 0.717
GSMUA_AchrUn_randomG23710_001 Musa acuminata GSMUA_AchrUn_randomG23710_001 I 0.717
LPERR08G20530 Leersia perrieri LPERR08G20530 I 0.717
SapurV1A.0532s0200 Salix purpurea SapurV1A.0532s0200 I 0.717
MTR_8g036105 Medicago truncatula MTR_8g036105 I 0.717
ONIVA03G03580 Oryza nivara ONIVA03G03580 I 0.717
Gorai.004G073300 Gossypium raimondii Gorai.004G073300 I 0.717
Ca_19716 Cicer arietinum Ca_19716 I 0.717
OB03G13890 Oryza brachyantha OB03G13890 I 0.717
ONIVA10G03250 Oryza nivara ONIVA10G03250 I 0.717
gw1.157.74.1 Physcomitrella patens gw1.157.74.1 I 0.717
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I 0.717
gw1.261.12.1 Physcomitrella patens gw1.261.12.1 I 0.717
POPTR_0013s06070 Populus trichocarpa POPTR_0013s06070 I 0.717
ORGLA10G0025200 Oryza glaberrima ORGLA10G0025200 I 0.717
ORUFI10G03180 Oryza rufipogon ORUFI10G03180 I 0.717
OS03G0149100 Oryza sativa OS03G0149100 I 0.717
cassava25975.m1 Manihot esculenta cassava25975.m1 I 0.717
BGIOSGA011445 Oryza indica BGIOSGA011445 I 0.717
GSMUA_Achr1G06580_001 Musa acuminata GSMUA_Achr1G06580_001 I 0.717
OS10G0162600 Oryza sativa OS10G0162600 I 0.717
GLYMA03G02620 Glycine max GLYMA03G02620 I 0.717
cassava15337.m1 Manihot esculenta cassava15337.m1 I 0.717
gw1.61.81.1 Physcomitrella patens gw1.61.81.1 I 0.717
PRUPE_ppa019939mg Prunus persica PRUPE_ppa019939mg I 0.717
Pavir.Ib02517 Panicum virgatum Pavir.Ib02517 I 0.717
OPUNC03G03520 Oryza punctata OPUNC03G03520 I 0.717
Pm020627 Prunus mume Pm020627 I 0.717
Sb01g024400 Sorghum bicolor Sb01g024400 I 0.717
OPUNC10G02630 Oryza punctata OPUNC10G02630 I 0.717
GLYMA01G34523 Glycine max GLYMA01G34523 I 0.717
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I 0.717
Aquca_013_00578 Aquilegia coerulea Aquca_013_00578 I 0.717
30072.m000955 Ricinus communis 30072.m000955 I 0.717
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I 0.717
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I 0.717
POPTR_0002s14980 Populus trichocarpa POPTR_0002s14980 I 0.713
chr1.CM1255.40.nc Lotus japonicus chr1.CM1255.40.nc I 0.707
MDP0000254224 Malus domestica MDP0000254224 I 0.707
orange1.1g042813m.g Citrus sinensis orange1.1g042813m.g I 0.707
Cla006087 Citrullus lanatus Cla006087 I 0.707
VIT_15s0048g00840 Vitis vinifera VIT_15s0048g00840 I 0.707
TCM_025849 Theobroma cacao TCM_025849 I 0.707
GRMZM2G092483 Zea mays GRMZM2G092483 I 0.707
GRMZM2G076327 Zea mays GRMZM2G076327 I 0.707
Pm028642 Prunus mume Pm028642 I 0.707
Solyc09g066270.2 Solanum lycopersicum Solyc09g066270.2 I 0.707
Si037727m.g Setaria italica Si037727m.g I 0.707
PGSC0003DMG400009716 Solanum tuberosum PGSC0003DMG400009716 I 0.707
OB03G20590 Oryza brachyantha OB03G20590 I 0.707
PGSC0003DMG400022454 Solanum tuberosum PGSC0003DMG400022454 I 0.707
POPTR_0002s14990 Populus trichocarpa POPTR_0002s14990 I 0.707
PRUPE_ppa024802mg Prunus persica PRUPE_ppa024802mg I 0.707
GLYMA09G40500 Glycine max GLYMA09G40500 I 0.707
GLYMA03G02631 Glycine max GLYMA03G02631 I 0.707
Ciclev10021843m.g Citrus clementina Ciclev10021843m.g I 0.707
Carubv10001875m.g Capsella rubella Carubv10001875m.g I 0.707
Gorai.001G251700 Gossypium raimondii Gorai.001G251700 I 0.707
Bra037322 Brassica rapa Bra037322 I 0.707
Gorai.007G091600 Gossypium raimondii Gorai.007G091600 I 0.707
Cagra.1261s0014 Capsella grandiflora Cagra.1261s0014 I 0.707
GLYMA01G34540 Glycine max GLYMA01G34540 I 0.707
Cucsa.053450 Cucumis sativus Cucsa.053450 I 0.707
Cucsa.257700 Cucumis sativus Cucsa.257700 I 0.707
mgf006429m Mimulus guttatus mgf006429m I 0.707
Aquca_013_00580 Aquilegia coerulea Aquca_013_00580 I 0.707
Bo9g002150 Brassica oleracea Bo9g002150 I 0.707