GLYMA14G38280 (Glycine max)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 GLYMA14G38280 T245236_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD13
M06956_2.00 		Arabidopsis thaliana
YGSCGDNDDHNVCGGHG
CDCCGBNDHHNHCGSCR		 Dap-seq
OMalley et al.(2016)
LBD13_col_a 		0.848 0.848
LBD13
M06957_2.00 		Arabidopsis thaliana
CGSCGNNDDWNNCGG
CCGNNWHHNNCGSCG		 Dap-seq
OMalley et al.(2016)
LBD13_colamp_a 		0.848 0.848
LBD4
M02261_2.00 		Arabidopsis thaliana
VDNVCGSNNN
NNNSCGBNHB		 PBM
Weirauch et al.(2014)
pTH7515 		0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA14G38280.1 LOB 20 118
GLYMA14G38280.2 LOB 46 144

Links

Other LOB family TFs
Other Glycine max TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK21617.1 Cannabis sativa PK21617.1 I 0.978
GLYMA02G40080 Glycine max GLYMA02G40080 I 0.960
cassava20848.m1 Manihot esculenta cassava20848.m1 I 0.949
TCM_042262 Theobroma cacao TCM_042262 I 0.949
Gorai.009G295000 Gossypium raimondii Gorai.009G295000 I 0.939
cassava15554.m1 Manihot esculenta cassava15554.m1 I 0.939
29729.m002335 Ricinus communis 29729.m002335 I 0.939
TCM_045438 Theobroma cacao TCM_045438 I 0.939
Gorai.003G151800 Gossypium raimondii Gorai.003G151800 I 0.939
LBD15 Vitis vinifera VIT_13s0067g02380 I 0.939
GLYMA04G39830 Glycine max GLYMA04G39830 I 0.929
Gorai.013G005900 Gossypium raimondii Gorai.013G005900 I 0.929
evm.TU.supercontig_2.327 Carica papaya evm.TU.supercontig_2.327 I 0.929
GLYMA06G15050 Glycine max GLYMA06G15050 I 0.929
PRUPE_ppa011757mg Prunus persica PRUPE_ppa011757mg I 0.929
Ca_15642 Cicer arietinum Ca_15642 I 0.929
PK17217.1 Cannabis sativa PK17217.1 I 0.929
Aquca_005_00169 Aquilegia coerulea Aquca_005_00169 I 0.929
AMTR_s00007p00227160 Amborella trichopoda AMTR_s00007p00227160 I 0.929
LjSGA_040320.1 Lotus japonicus LjSGA_040320.1 I 0.922
PGSC0003DMG400029080 Solanum tuberosum PGSC0003DMG400029080 I 0.919
GSMUA_Achr11G08330_001 Musa acuminata GSMUA_Achr11G08330_001 I 0.919
mgf011471m Mimulus guttatus mgf011471m I 0.919
POPTR_0019s14790 Populus trichocarpa POPTR_0019s14790 I 0.919
SapurV1A.0215s0070 Salix purpurea SapurV1A.0215s0070 I 0.919
evm.TU.supercontig_19.92 Carica papaya evm.TU.supercontig_19.92 I 0.919
Eucgr.G03121 Eucalyptus grandis Eucgr.G03121 I 0.919
Eucgr.B04019 Eucalyptus grandis Eucgr.B04019 I 0.919
Solyc06g050430.2 Solanum lycopersicum Solyc06g050430.2 I 0.919
gene21311-v1.0-hybrid Fragaria vesca gene21311-v1.0-hybrid I 0.919
MTR_5g075020 Medicago truncatula MTR_5g075020 I 0.919
MDP0000278334 Malus domestica MDP0000278334 I 0.909
Carubv10024002m.g Capsella rubella Carubv10024002m.g I 0.909
Bostr.23794s0013 Boechera stricta Bostr.23794s0013 I 0.909
Solyc06g082430.1 Solanum lycopersicum Solyc06g082430.1 I 0.909
Lus10009930.g Linum usitatissimum Lus10009930.g I 0.909
POPTR_0013s15220 Populus trichocarpa POPTR_0013s15220 I 0.909
POPTR_0013s08040 Populus trichocarpa POPTR_0013s08040 I 0.909
Gorai.012G015900 Gossypium raimondii Gorai.012G015900 I 0.909
Cagra.1642s0010 Capsella grandiflora Cagra.1642s0010 I 0.909
Solyc06g007390.2 Solanum lycopersicum Solyc06g007390.2 I 0.909
Lus10024183.g Linum usitatissimum Lus10024183.g I 0.909
SapurV1A.0222s0070 Salix purpurea SapurV1A.0222s0070 I 0.909
Bo4g012620 Brassica oleracea Bo4g012620 I 0.909
LBD15 Arabidopsis lyrata fgenesh2_kg.4__2164__AT2G40470.1 I 0.909
chr1.CM0125.30.nd Lotus japonicus chr1.CM0125.30.nd I 0.909
Bra004572 Brassica rapa Bra004572 I 0.909
LBD15 Arabidopsis thaliana AT2G40470 I 0.909
cassava31953.m1 Manihot esculenta cassava31953.m1 I 0.909
Cla007391 Citrullus lanatus Cla007391 I 0.899
PGSC0003DMG400020562 Solanum tuberosum PGSC0003DMG400020562 I 0.899
Bra000188 Brassica rapa Bra000188 I 0.899
Bo4g190210 Brassica oleracea Bo4g190210 I 0.899
Bo3g034980 Brassica oleracea Bo3g034980 I 0.899
Ciclev10002348m.g Citrus clementina Ciclev10002348m.g I 0.899
MTR_3g094690 Medicago truncatula MTR_3g094690 I 0.899
Thhalv10017905m.g Eutrema salsugineum Thhalv10017905m.g I 0.899
Ca_04126 Cicer arietinum Ca_04126 I 0.899
PGSC0003DMG400030461 Solanum tuberosum PGSC0003DMG400030461 I 0.899
29957.m001411 Ricinus communis 29957.m001411 I 0.899
orange1.1g028221m.g Citrus sinensis orange1.1g028221m.g I 0.899
PRUPE_ppa019397mg Prunus persica PRUPE_ppa019397mg I 0.889
Ciclev10032684m.g Citrus clementina Ciclev10032684m.g I 0.889
Cucsa.144080 Cucumis sativus Cucsa.144080 I 0.889
chr2.CM1032.110.nc Lotus japonicus chr2.CM1032.110.nc I 0.889
orange1.1g027307m.g Citrus sinensis orange1.1g027307m.g I 0.889
MTR_5g083960 Medicago truncatula MTR_5g083960 I 0.889
Ca_12420 Cicer arietinum Ca_12420 I 0.889
OB05G14280 Oryza brachyantha OB05G14280 I 0.885
PK03716.1 Cannabis sativa PK03716.1 I 0.882
MDP0000167580 Malus domestica MDP0000167580 I 0.880
gw1.9.232.1 Physcomitrella patens gw1.9.232.1 I 0.879
gw1.156.75.1 Physcomitrella patens gw1.156.75.1 I 0.879
gene28137-v1.0-hybrid Fragaria vesca gene28137-v1.0-hybrid I 0.879
Pm000277 Prunus mume Pm000277 I 0.879
Cucsa.326100 Cucumis sativus Cucsa.326100 I 0.879
Bra016992 Brassica rapa Bra016992 I 0.879
LBD13 Vitis vinifera VIT_06s0004g07790 I 0.879
Si004575m.g Setaria italica Si004575m.g I 0.869
GSMUA_Achr5G07460_001 Musa acuminata GSMUA_Achr5G07460_001 I 0.869
MLOC_16076 Hordeum vulgare MLOC_16076 I 0.869
Si012018m.g Setaria italica Si012018m.g I 0.869
TRIUR3_34193 Triticum urartu TRIUR3_34193 I 0.869
GSMUA_AchrUn_randomG14060_001 Musa acuminata GSMUA_AchrUn_randomG14060_001 I 0.869
F775_25790 Aegilops tauschii F775_25790 I 0.869
BRADI2G53690 Brachypodium distachyon BRADI2G53690 I 0.869
TRIUR3_18328 Triticum urartu TRIUR3_18328 I 0.863
BGIOSGA004719 Oryza indica BGIOSGA004719 I 0.859
TRAES3BF078900060CFD_g Triticum aestivum TRAES3BF078900060CFD_g I 0.859
BGIOSGA018747 Oryza indica BGIOSGA018747 I 0.859
Bo4g172950 Brassica oleracea Bo4g172950 I 0.859
Pavir.J00291 Panicum virgatum Pavir.J00291 I 0.859
GRMZM2G092517 Zea mays GRMZM2G092517 I 0.859
OLONG_000658 Oryza longistaminata OLONG_000658 I 0.859
OMERI01G32750 Oryza meridionalis OMERI01G32750 I 0.859
OMERI05G04500 Oryza meridionalis OMERI05G04500 I 0.859
ONIVA01G40640 Oryza nivara ONIVA01G40640 I 0.859
OGLUM05G04450 Oryza glumaepatula OGLUM05G04450 I 0.859
OGLUM01G39690 Oryza glumaepatula OGLUM01G39690 I 0.859
LPERR01G30700 Leersia perrieri LPERR01G30700 I 0.859
GSMUA_Achr7G22200_001 Musa acuminata GSMUA_Achr7G22200_001 I 0.859
OBART01G35680 Oryza barthii OBART01G35680 I 0.859
OBART05G04570 Oryza barthii OBART05G04570 I 0.859
ONIVA05G04920 Oryza nivara ONIVA05G04920 I 0.859
ORGLA01G0294900 Oryza glaberrima ORGLA01G0294900 I 0.859
Pavir.Eb03580 Panicum virgatum Pavir.Eb03580 I 0.859
Bra021627 Brassica rapa Bra021627 I 0.859
Sb03g038410 Sorghum bicolor Sb03g038410 I 0.859
Sb09g004940 Sorghum bicolor Sb09g004940 I 0.859
LBD13 Arabidopsis lyrata fgenesh2_kg.4__1005__AT2G30340.1 I 0.859
OS05G0165450 Oryza sativa OS05G0165450 I 0.859
ORGLA05G0042200 Oryza glaberrima ORGLA05G0042200 I 0.859
ORUFI01G39050 Oryza rufipogon ORUFI01G39050 I 0.859
ORUFI05G04770 Oryza rufipogon ORUFI05G04770 I 0.859
OS01G0825000 Oryza sativa OS01G0825000 I 0.859
mgf020556m Mimulus guttatus mgf020556m I 0.859
OPUNC01G34540 Oryza punctata OPUNC01G34540 I 0.848
Pavir.Ea03276 Panicum virgatum Pavir.Ea03276 I 0.848
LBD13 Arabidopsis thaliana AT2G30340 D 0.848
Thhalv10017073m.g Eutrema salsugineum Thhalv10017073m.g I 0.848
Bra018320 Brassica rapa Bra018320 I 0.848
Bo4g059520 Brassica oleracea Bo4g059520 I 0.848
Pavir.Ca01098 Panicum virgatum Pavir.Ca01098 I 0.848
GRMZM5G868471 Zea mays GRMZM5G868471 I 0.848
Cagra.0567s0001 Capsella grandiflora Cagra.0567s0001 I 0.848
SELMODRAFT_37169 Selaginella moellendorffii SELMODRAFT_37169 I 0.848
SELMODRAFT_26920 Selaginella moellendorffii SELMODRAFT_26920 I 0.848
Bostr.24513s0205 Boechera stricta Bostr.24513s0205 I 0.848
OB01G44400 Oryza brachyantha OB01G44400 I 0.848
Carubv10024870m.g Capsella rubella Carubv10024870m.g I 0.838
Traes_1BS_8F922CA93 Triticum aestivum Traes_1BS_8F922CA93 I 0.838
LPERR05G04040 Leersia perrieri LPERR05G04040 I 0.838
MLOC_56075 Hordeum vulgare MLOC_56075 I 0.838
Traes_1AS_43FB6A3CF Triticum aestivum Traes_1AS_43FB6A3CF I 0.838
Traes_1DS_BB8508CC6 Triticum aestivum Traes_1DS_BB8508CC6 I 0.838
F775_52636 Aegilops tauschii F775_52636 I 0.838
BRADI2G34520 Brachypodium distachyon BRADI2G34520 I 0.828
PDK_20s1387061g002 Phoenix dactylifera PDK_20s1387061g002 I 0.808
Cla006731 Citrullus lanatus Cla006731 I 0.800
Lus10034208.g Linum usitatissimum Lus10034208.g I 0.798
Bo4g190140 Brassica oleracea Bo4g190140 I 0.789
Lus10029061.g Linum usitatissimum Lus10029061.g I 0.788
PDK_20s1537041g001 Phoenix dactylifera PDK_20s1537041g001 N 0.763
OLONG_007328 Oryza longistaminata OLONG_007328 I 0.758
PDK_20s1448121g001 Phoenix dactylifera PDK_20s1448121g001 N 0.746
SELMODRAFT_48883 Selaginella moellendorffii SELMODRAFT_48883 I 0.737
SELMODRAFT_58936 Selaginella moellendorffii SELMODRAFT_58936 I 0.737
PK17019.1 Cannabis sativa PK17019.1 I 0.735
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.727
mgf026046m Mimulus guttatus mgf026046m I 0.727
MTR_5g083230 Medicago truncatula MTR_5g083230 I 0.727
Si026864m.g Setaria italica Si026864m.g I 0.727
Sb01g012810 Sorghum bicolor Sb01g012810 I 0.727
PK29334.1 Cannabis sativa PK29334.1 I 0.719
Pavir.J06256 Panicum virgatum Pavir.J06256 I 0.717
Lus10031191.g Linum usitatissimum Lus10031191.g I 0.717
Pavir.J13923 Panicum virgatum Pavir.J13923 I 0.717
Pavir.J18260 Panicum virgatum Pavir.J18260 I 0.717
orange1.1g044340m.g Citrus sinensis orange1.1g044340m.g I 0.717
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I 0.717
Ca_12450 Cicer arietinum Ca_12450 I 0.717
Ciclev10006113m.g Citrus clementina Ciclev10006113m.g I 0.717
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I 0.717
Si037583m.g Setaria italica Si037583m.g I 0.717
GRMZM2G079185 Zea mays GRMZM2G079185 I 0.707
Pm011040 Prunus mume Pm011040 I 0.707
ASL5 Arabidopsis lyrata fgenesh2_kg.4__983__AT2G30130.1 I 0.707
LBD4 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002773 I 0.707
Bra018335 Brassica rapa Bra018335 I 0.707
Bo3g024350 Brassica oleracea Bo3g024350 I 0.707
Bo4g059700 Brassica oleracea Bo4g059700 I 0.707
chr6.CM0738.260.nd Lotus japonicus chr6.CM0738.260.nd I 0.707
BGIOSGA013249 Oryza indica BGIOSGA013249 I 0.707
cassava27818.m1 Manihot esculenta cassava27818.m1 I 0.707
LBD4 Arabidopsis thaliana AT1G31320 D 0.707
Bo4g170770 Brassica oleracea Bo4g170770 I 0.707
Bra022780 Brassica rapa Bra022780 I 0.707
Thhalv10008917m.g Eutrema salsugineum Thhalv10008917m.g I 0.707
Bra021612 Brassica rapa Bra021612 I 0.707
LBD12 Arabidopsis thaliana AT2G30130 I 0.707
30169.m006340 Ricinus communis 30169.m006340 I 0.707
MDP0000268890 Malus domestica MDP0000268890 I 0.707
SELMODRAFT_49084 Selaginella moellendorffii SELMODRAFT_49084 I 0.707
SELMODRAFT_49085 Selaginella moellendorffii SELMODRAFT_49085 I 0.707
gene20083-v1.0-hybrid Fragaria vesca gene20083-v1.0-hybrid I 0.707
PRUPE_ppa012504mg Prunus persica PRUPE_ppa012504mg I 0.707
PRUPE_ppa012322mg Prunus persica PRUPE_ppa012322mg I 0.707
Ciclev10032929m.g Citrus clementina Ciclev10032929m.g I 0.707
Ciclev10029962m.g Citrus clementina Ciclev10029962m.g I 0.707
Ca_13575 Cicer arietinum Ca_13575 I 0.707
Cagra.1508s0061 Capsella grandiflora Cagra.1508s0061 I 0.707
Carubv10010462m.g Capsella rubella Carubv10010462m.g I 0.707
TCM_032557 Theobroma cacao TCM_032557 I 0.707
Carubv10025543m.g Capsella rubella Carubv10025543m.g I 0.707
Gorai.002G104500 Gossypium raimondii Gorai.002G104500 I 0.707
PRUPE_ppa012253mg Prunus persica PRUPE_ppa012253mg I 0.707
MDP0000121203 Malus domestica MDP0000121203 I 0.707
Bostr.15697s0446 Boechera stricta Bostr.15697s0446 I 0.707
OGLUM04G05130 Oryza glumaepatula OGLUM04G05130 I 0.707
MDP0000284409 Malus domestica MDP0000284409 I 0.707
Aquca_118_00035 Aquilegia coerulea Aquca_118_00035 I 0.707
Lus10031769.g Linum usitatissimum Lus10031769.g I 0.707
cassava30732.valid.m1 Manihot esculenta cassava30732.valid.m1 I 0.707
POPTR_0010s19180 Populus trichocarpa POPTR_0010s19180 I 0.707
Gorai.006G033100 Gossypium raimondii Gorai.006G033100 I 0.707
ORUFI03G29410 Oryza rufipogon ORUFI03G29410 I 0.707
ONIVA03G29300 Oryza nivara ONIVA03G29300 I 0.707
OMERI03G24920 Oryza meridionalis OMERI03G24920 I 0.707
orange1.1g036782m.g Citrus sinensis orange1.1g036782m.g I 0.707