GLYMA16G09720 (Glycine max)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 GLYMA16G09720 T245242_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LOB
M06966_2.00 		Arabidopsis thaliana
NVCGGCGGHRRHDRMGGMGGH
DCCKCCKYHDYYDCCGCCGBN		 Dap-seq
OMalley et al.(2016)
LOB_col_a 		0.756 0.756
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA16G09720.1 LOB 47 87

Links

Other LOB family TFs
Other Glycine max TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA19G12650 Glycine max GLYMA19G12650 I 0.829
Ca_24372 Cicer arietinum Ca_24372 I 0.805
Eucgr.K02809 Eucalyptus grandis Eucgr.K02809 I 0.805
Aquca_011_00559 Aquilegia coerulea Aquca_011_00559 I 0.805
GLYMA01G32340 Glycine max GLYMA01G32340 N 0.805
GLYMA16G07770 Glycine max GLYMA16G07770 I 0.805
Pm015649 Prunus mume Pm015649 I 0.805
MTR_7g033800 Medicago truncatula MTR_7g033800 I 0.805
Gorai.006G033100 Gossypium raimondii Gorai.006G033100 I 0.805
TCM_016952 Theobroma cacao TCM_016952 I 0.805
MDP0000848210 Malus domestica MDP0000848210 I 0.805
PRUPE_ppa018381mg Prunus persica PRUPE_ppa018381mg I 0.805
SapurV1A.1328s0080 Salix purpurea SapurV1A.1328s0080 I 0.805
chr2.LjT30P12.80.nc Lotus japonicus chr2.LjT30P12.80.nc I 0.805
PK26472.1 Cannabis sativa PK26472.1 I 0.805
POPTR_0001s35280 Populus trichocarpa POPTR_0001s35280 I 0.805
POPTR_0012s08540 Populus trichocarpa POPTR_0012s08540 I 0.780
Cla019510 Citrullus lanatus Cla019510 I 0.780
Pm024312 Prunus mume Pm024312 I 0.780
Ca_08824 Cicer arietinum Ca_08824 I 0.780
29917.m001993 Ricinus communis 29917.m001993 I 0.780
TCM_012190 Theobroma cacao TCM_012190 I 0.780
PRUPE_ppa023059mg Prunus persica PRUPE_ppa023059mg I 0.780
Ca_07463 Cicer arietinum Ca_07463 I 0.780
Solyc03g112430.1 Solanum lycopersicum Solyc03g112430.1 I 0.780
POPTR_0015s09370 Populus trichocarpa POPTR_0015s09370 I 0.780
Cucsa.196600 Cucumis sativus Cucsa.196600 I 0.780
MDP0000254288 Malus domestica MDP0000254288 I 0.780
MDP0000130659 Malus domestica MDP0000130659 I 0.780
Gorai.012G063800 Gossypium raimondii Gorai.012G063800 I 0.780
SapurV1A.0011s0490 Salix purpurea SapurV1A.0011s0490 I 0.780
SapurV1A.1247s0030 Salix purpurea SapurV1A.1247s0030 I 0.780
LjSGA_042891.1 Lotus japonicus LjSGA_042891.1 I 0.780
chr1.CM0171.410.nc Lotus japonicus chr1.CM0171.410.nc I 0.780
Gorai.007G075700 Gossypium raimondii Gorai.007G075700 I 0.780
evm.TU.supercontig_108.62 Carica papaya evm.TU.supercontig_108.62 I 0.780
cassava19770.m1 Manihot esculenta cassava19770.m1 I 0.780
cassava12464.valid.m1 Manihot esculenta cassava12464.valid.m1 I 0.780
cassava33952.m1 Manihot esculenta cassava33952.m1 I 0.780
PGSC0003DMG400018112 Solanum tuberosum PGSC0003DMG400018112 I 0.780
Eucgr.J02237 Eucalyptus grandis Eucgr.J02237 I 0.780
Aquca_061_00084 Aquilegia coerulea Aquca_061_00084 I 0.780
30147.m013890 Ricinus communis 30147.m013890 I 0.780
LOB Vitis vinifera VIT_17s0000g09010 I 0.780
MTR_3g077240 Medicago truncatula MTR_3g077240 I 0.780
MTR_4g105170 Medicago truncatula MTR_4g105170 I 0.780
GLYMA05G08870 Glycine max GLYMA05G08870 I 0.780
GLYMA05G02530 Glycine max GLYMA05G02530 I 0.780
GLYMA19G00390 Glycine max GLYMA19G00390 I 0.780
GLYMA17G09380 Glycine max GLYMA17G09380 I 0.780
Ciclev10017006m.g Citrus clementina Ciclev10017006m.g I 0.756
Eucgr.I01750 Eucalyptus grandis Eucgr.I01750 I 0.756
Carubv10028397m.g Capsella rubella Carubv10028397m.g I 0.756
Ciclev10022371m.g Citrus clementina Ciclev10022371m.g I 0.756
GLYMA06G18861 Glycine max GLYMA06G18861 I 0.756
Cucsa.339980 Cucumis sativus Cucsa.339980 I 0.756
mgf016361m Mimulus guttatus mgf016361m I 0.756
GLYMA04G36080 Glycine max GLYMA04G36080 I 0.756
Bostr.0568s0498 Boechera stricta Bostr.0568s0498 I 0.756
Cagra.5118s0045 Capsella grandiflora Cagra.5118s0045 I 0.756
evm.TU.supercontig_110.17 Carica papaya evm.TU.supercontig_110.17 I 0.756
Bo9g017470 Brassica oleracea Bo9g017470 I 0.756
orange1.1g036845m.g Citrus sinensis orange1.1g036845m.g I 0.756
Thhalv10004979m.g Eutrema salsugineum Thhalv10004979m.g I 0.756
PK21510.1 Cannabis sativa PK21510.1 I 0.756
LOB Arabidopsis thaliana AT5G63090 D 0.756
Bo3g104760 Brassica oleracea Bo3g104760 I 0.756
orange1.1g031572m.g Citrus sinensis orange1.1g031572m.g I 0.756
Bra038606 Brassica rapa Bra038606 I 0.756
gene31797-v1.0-hybrid Fragaria vesca gene31797-v1.0-hybrid I 0.756
gene28478-v1.0-hybrid Fragaria vesca gene28478-v1.0-hybrid I 0.756
Lus10001139.g Linum usitatissimum Lus10001139.g I 0.756
Lus10022264.g Linum usitatissimum Lus10022264.g I 0.756
Lus10039940.g Linum usitatissimum Lus10039940.g I 0.756
Lus10027676.g Linum usitatissimum Lus10027676.g I 0.756
Cucsa.011300 Cucumis sativus Cucsa.011300 I 0.756
mgf024603m Mimulus guttatus mgf024603m I 0.756
Cla017388 Citrullus lanatus Cla017388 I 0.756
Cla010600 Citrullus lanatus Cla010600 I 0.756
LOB Arabidopsis lyrata scaffold_802995.1 I 0.756
LBD25 Vitis vinifera VIT_14s0066g00680 I 0.756
MTR_6g005070 Medicago truncatula MTR_6g005070 I 0.756
MTR_6g005080 Medicago truncatula MTR_6g005080 I 0.756
PGSC0003DMG400012629 Solanum tuberosum PGSC0003DMG400012629 I 0.756
GSMUA_Achr2G23130_001 Musa acuminata GSMUA_Achr2G23130_001 I 0.756
cassava3724.m1 Manihot esculenta cassava3724.m1 I 0.732
Solyc02g086480.1 Solanum lycopersicum Solyc02g086480.1 I 0.732
mg007559m Mimulus guttatus mg007559m N 0.732
GSMUA_Achr10G20760_001 Musa acuminata GSMUA_Achr10G20760_001 I 0.732
Solyc03g063140.2 Solanum lycopersicum Solyc03g063140.2 I 0.707
Sb03g004590 Sorghum bicolor Sb03g004590 I 0.707
Bra035860 Brassica rapa Bra035860 I 0.707
Si002632m.g Setaria italica Si002632m.g I 0.707
Pavir.Eb00458 Panicum virgatum Pavir.Eb00458 I 0.707
Bra025294 Brassica rapa Bra025294 I 0.707
ORUFI01G04670 Oryza rufipogon ORUFI01G04670 I 0.707
PGSC0003DMG400000974 Solanum tuberosum PGSC0003DMG400000974 I 0.707
BGIOSGA002306 Oryza indica BGIOSGA002306 I 0.707
LBD25 Arabidopsis thaliana AT3G27650 I 0.707
OS01G0169400 Oryza sativa OS01G0169400 I 0.707
ONIVA01G04930 Oryza nivara ONIVA01G04930 I 0.707
ORGLA01G0040900 Oryza glaberrima ORGLA01G0040900 I 0.707
Bo9g008330 Brassica oleracea Bo9g008330 I 0.707
Bo7g085860 Brassica oleracea Bo7g085860 I 0.707
Pavir.J38993 Panicum virgatum Pavir.J38993 I 0.707
OMERI01G04420 Oryza meridionalis OMERI01G04420 I 0.707
Carubv10018238m.g Capsella rubella Carubv10018238m.g I 0.707
Cla003499 Citrullus lanatus Cla003499 I 0.707
OB01G14220 Oryza brachyantha OB01G14220 I 0.707
Cagra.5575s0004 Capsella grandiflora Cagra.5575s0004 I 0.707
Bostr.0556s0446 Boechera stricta Bostr.0556s0446 I 0.707
Cucsa.098680 Cucumis sativus Cucsa.098680 I 0.707
LPERR01G04140 Leersia perrieri LPERR01G04140 I 0.707
PGSC0003DMG400027078 Solanum tuberosum PGSC0003DMG400027078 I 0.707
OBART01G04470 Oryza barthii OBART01G04470 I 0.707
OGLUM01G04900 Oryza glumaepatula OGLUM01G04900 I 0.707
F775_25656 Aegilops tauschii F775_25656 I 0.707
BRADI2G04270 Brachypodium distachyon BRADI2G04270 I 0.707
Bra039072 Brassica rapa Bra039072 I 0.707
OLONG_009404 Oryza longistaminata OLONG_009404 I 0.707
TRIUR3_10339 Triticum urartu TRIUR3_10339 I 0.707
AC233943.1_FG002 Zea mays AC233943.1_FG002 I 0.707
LBD25 Arabidopsis lyrata fgenesh2_kg.5__545__AT3G27650.1 I 0.707
Solyc06g071660.1 Solanum lycopersicum Solyc06g071660.1 I 0.707