GRMZM2G096064 (Zea mays)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 GRMZM2G096064 T245280_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD6
M06955_2.00 		Arabidopsis thaliana
CGSCGGNDDHDRCGGMGRHDN
NHDYCKCCGYHDHHNCCGSCG		 Dap-seq
OMalley et al.(2016)
AS2_col_a 		0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G096064_P01 LOB 53 151

Links

Other LOB family TFs
Other Zea mays TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb09g020440 Sorghum bicolor Sb09g020440 I 0.848
Traes_1DL_1290B6A52 Triticum aestivum Traes_1DL_1290B6A52 I 0.846
Pavir.J03307 Panicum virgatum Pavir.J03307 I 0.828
Pavir.J03238 Panicum virgatum Pavir.J03238 I 0.818
Si024114m.g Setaria italica Si024114m.g I 0.818
GRMZM2G118250 Zea mays GRMZM2G118250 I 0.808
Sb03g042310 Sorghum bicolor Sb03g042310 I 0.808
Pavir.Ea03589 Panicum virgatum Pavir.Ea03589 I 0.808
Si002599m.g Setaria italica Si002599m.g I 0.808
MLOC_72525 Hordeum vulgare MLOC_72525 I 0.798
Pavir.J22284 Panicum virgatum Pavir.J22284 I 0.798
Pavir.J16692 Panicum virgatum Pavir.J16692 I 0.798
F775_20715 Aegilops tauschii F775_20715 I 0.798
TRAES3BF084400010CFD_g Triticum aestivum TRAES3BF084400010CFD_g I 0.798
OB01G48740 Oryza brachyantha OB01G48740 I 0.788
MLOC_61156 Hordeum vulgare MLOC_61156 I 0.788
TRIUR3_32863 Triticum urartu TRIUR3_32863 I 0.788
OGLUM01G44190 Oryza glumaepatula OGLUM01G44190 I 0.778
OLONG_016086 Oryza longistaminata OLONG_016086 I 0.778
LBD6 Oryza sativa OS01G0889400 I 0.778
OBART01G39990 Oryza barthii OBART01G39990 I 0.778
Traes_1AL_4B89B33E3 Triticum aestivum Traes_1AL_4B89B33E3 I 0.778
ORUFI01G43320 Oryza rufipogon ORUFI01G43320 I 0.778
ORGLA01G0339000 Oryza glaberrima ORGLA01G0339000 I 0.778
OPUNC01G38680 Oryza punctata OPUNC01G38680 I 0.778
OMERI01G36900 Oryza meridionalis OMERI01G36900 I 0.778
ONIVA01G44840 Oryza nivara ONIVA01G44840 I 0.778
OB05G24560 Oryza brachyantha OB05G24560 I 0.778
LBD6 Oryza indica BGIOSGA004955 I 0.778
F775_21760 Aegilops tauschii F775_21760 I 0.778
BRADI2G57380 Brachypodium distachyon BRADI2G57380 I 0.778
LPERR01G34430 Leersia perrieri LPERR01G34430 I 0.778
GRMZM2G133806 Zea mays GRMZM2G133806 I 0.768
OGLUM05G17630 Oryza glumaepatula OGLUM05G17630 I 0.768
ORUFI05G17830 Oryza rufipogon ORUFI05G17830 I 0.768
BRADI2G25270 Brachypodium distachyon BRADI2G25270 I 0.768
OS05G0417000 Oryza sativa OS05G0417000 I 0.768
BGIOSGA018046 Oryza indica BGIOSGA018046 I 0.768
ORGLA05G0143500 Oryza glaberrima ORGLA05G0143500 I 0.768
VIT_00s0215g00010 Vitis vinifera VIT_00s0215g00010 I 0.759
TRIUR3_23928 Triticum urartu TRIUR3_23928 I 0.758
PK18922.1 Cannabis sativa PK18922.1 I 0.754
GSMUA_Achr7G23710_001 Musa acuminata GSMUA_Achr7G23710_001 I 0.750
LPERR05G13240 Leersia perrieri LPERR05G13240 I 0.732
Solyc11g008830.1 Solanum lycopersicum Solyc11g008830.1 I 0.727
Gorai.007G350300 Gossypium raimondii Gorai.007G350300 I 0.727
Ciclev10017910m.g Citrus clementina Ciclev10017910m.g I 0.727
mgf014755m Mimulus guttatus mgf014755m I 0.727
GSMUA_Achr5G25770_001 Musa acuminata GSMUA_Achr5G25770_001 I 0.727
GSMUA_Achr11G26500_001 Musa acuminata GSMUA_Achr11G26500_001 I 0.727
orange1.1g027472m.g Citrus sinensis orange1.1g027472m.g I 0.727
F775_33210 Aegilops tauschii F775_33210 I 0.726
evm.TU.supercontig_331.6 Carica papaya evm.TU.supercontig_331.6 I 0.723
PK13228.1 Cannabis sativa PK13228.1 I 0.719
Eucgr.C02148 Eucalyptus grandis Eucgr.C02148 I 0.717
Carubv10020974m.g Capsella rubella Carubv10020974m.g I 0.717
Cagra.10809s0001 Capsella grandiflora Cagra.10809s0001 I 0.717
MDP0000273432 Malus domestica MDP0000273432 I 0.717
SapurV1A.0164s0090 Salix purpurea SapurV1A.0164s0090 I 0.717
SapurV1A.0093s0490 Salix purpurea SapurV1A.0093s0490 I 0.717
Thhalv10019572m.g Eutrema salsugineum Thhalv10019572m.g I 0.717
Bostr.26959s0351 Boechera stricta Bostr.26959s0351 I 0.717
gene21541-v1.0-hybrid Fragaria vesca gene21541-v1.0-hybrid I 0.717
evm.TU.supercontig_39.110 Carica papaya evm.TU.supercontig_39.110 I 0.717
PRUPE_ppa027059mg Prunus persica PRUPE_ppa027059mg I 0.717
GRMZM2G154320 Zea mays GRMZM2G154320 N 0.717
MTR_8g040900 Medicago truncatula MTR_8g040900 I 0.717
PGSC0003DMG400000974 Solanum tuberosum PGSC0003DMG400000974 I 0.717
POPTR_0008s07930 Populus trichocarpa POPTR_0008s07930 I 0.717
GLYMA15G36310 Glycine max GLYMA15G36310 I 0.717
GLYMA13G26020 Glycine max GLYMA13G26020 I 0.717
Bo2g051420 Brassica oleracea Bo2g051420 I 0.717
Bra039733 Brassica rapa Bra039733 I 0.717
AS2 Arabidopsis lyrata fgenesh2_kg.2__796__AT1G65620.2 I 0.717
POPTR_0010s18460 Populus trichocarpa POPTR_0010s18460 I 0.717
LBD6 Arabidopsis thaliana AT1G65620 D 0.717
Cla005851 Citrullus lanatus Cla005851 I 0.717
29929.m004500 Ricinus communis 29929.m004500 I 0.717
cassava1141.valid.m1 Manihot esculenta cassava1141.valid.m1 I 0.717
Cucsa.178830 Cucumis sativus Cucsa.178830 I 0.717
Ca_20200 Cicer arietinum Ca_20200 I 0.717
AS2 Vitis vinifera VIT_00s0340g00090 I 0.717
Solyc03g063140.2 Solanum lycopersicum Solyc03g063140.2 I 0.717
TCM_024217 Theobroma cacao TCM_024217 I 0.717
Aquca_058_00006 Aquilegia coerulea Aquca_058_00006 I 0.717
MDP0000643326 Malus domestica MDP0000643326 I 0.707