GRMZM2G362627 (Zea mays)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 GRMZM2G362627 T245293_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LOB
M06966_2.00
Arabidopsis thaliana
NVCGGCGGHRRHDRMGGMGGH

DCCKCCKYHDYYDCCGCCGBN
Dap-seq
OMalley et al.(2016)
LOB_col_a
0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G362627_P01 LOB 7 105

Links

Other LOB family TFs
Other Zea mays TFs

146 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Sb01g014650 Sorghum bicolor Sb01g014650 I 0.899
Si036905m.g Setaria italica Si036905m.g I 0.889
F775_33210 Aegilops tauschii F775_33210 I 0.877
Pavir.J09541 Panicum virgatum Pavir.J09541 I 0.869
Pavir.Ib03943 Panicum virgatum Pavir.Ib03943 I 0.859
GRMZM2G154320 Zea mays GRMZM2G154320 N 0.848
LPERR03G21590 Leersia perrieri LPERR03G21590 I 0.848
OGLUM03G26820 Oryza glumaepatula OGLUM03G26820 I 0.828
ONIVA11G15310 Oryza nivara ONIVA11G15310 I 0.828
OS03G0612400 Oryza sativa OS03G0612400 I 0.828
Traes_4BS_C1F4F41E9 Triticum aestivum Traes_4BS_C1F4F41E9 I 0.828
Traes_4DS_72ABC3EE5 Triticum aestivum Traes_4DS_72ABC3EE5 I 0.828
ORUFI03G26840 Oryza rufipogon ORUFI03G26840 I 0.828
ORGLA03G0240600 Oryza glaberrima ORGLA03G0240600 I 0.828
BGIOSGA013119 Oryza indica BGIOSGA013119 I 0.828
BRADI1G14677 Brachypodium distachyon BRADI1G14677 N 0.818
Traes_4AL_C060BF9F6 Triticum aestivum Traes_4AL_C060BF9F6 I 0.818
OB03G34080 Oryza brachyantha OB03G34080 I 0.808
VIT_07s0197g00020 Vitis vinifera VIT_07s0197g00020 I 0.768
VIT_00s1247g00010 Vitis vinifera VIT_00s1247g00010 I 0.768
Solyc02g090410.2 Solanum lycopersicum Solyc02g090410.2 I 0.768
TCM_000560 Theobroma cacao TCM_000560 I 0.758
TRIUR3_06488 Triticum urartu TRIUR3_06488 I 0.758
gene24088-v1.0-hybrid Fragaria vesca gene24088-v1.0-hybrid I 0.758
Traes_1DL_1290B6A52 Triticum aestivum Traes_1DL_1290B6A52 I 0.754
PK18922.1 Cannabis sativa PK18922.1 I 0.754
PGSC0003DMG400010023 Solanum tuberosum PGSC0003DMG400010023 I 0.747
Gorai.007G210500 Gossypium raimondii Gorai.007G210500 I 0.747
Bo2g167820 Brassica oleracea Bo2g167820 I 0.747
POPTR_0007s11460 Populus trichocarpa POPTR_0007s11460 I 0.747
PRUPE_ppa026393mg Prunus persica PRUPE_ppa026393mg I 0.747
Aquca_007_00083 Aquilegia coerulea Aquca_007_00083 I 0.747
SapurV1A.0428s0090 Salix purpurea SapurV1A.0428s0090 I 0.747
mgf004296m Mimulus guttatus mgf004296m I 0.747
SapurV1A.0641s0140 Salix purpurea SapurV1A.0641s0140 I 0.747
SapurV1A.0811s0020 Salix purpurea SapurV1A.0811s0020 I 0.747
GLYMA01G39060 Glycine max GLYMA01G39060 I 0.747
GLYMA11G06210 Glycine max GLYMA11G06210 I 0.747
POPTR_0005s14150 Populus trichocarpa POPTR_0005s14150 I 0.747
Pm026450 Prunus mume Pm026450 I 0.747
chr2.LjT16G06.10.nd Lotus japonicus chr2.LjT16G06.10.nd I 0.747
VIT_00s0215g00010 Vitis vinifera VIT_00s0215g00010 I 0.741
Cucsa.250570 Cucumis sativus Cucsa.250570 I 0.737
Ciclev10027275m.g Citrus clementina Ciclev10027275m.g I 0.737
Solyc02g065150.1 Solanum lycopersicum Solyc02g065150.1 I 0.737
AMTR_s00066p00120340 Amborella trichopoda AMTR_s00066p00120340 I 0.737
LBD36 Arabidopsis thaliana AT5G66870 I 0.737
Lus10022463.g Linum usitatissimum Lus10022463.g I 0.737
orange1.1g039589m.g Citrus sinensis orange1.1g039589m.g I 0.737
Lus10005313.g Linum usitatissimum Lus10005313.g I 0.737
PGSC0003DMG402000764 Solanum tuberosum PGSC0003DMG402000764 I 0.737
GLYMA06G11181 Glycine max GLYMA06G11181 I 0.737
Lus10016769.g Linum usitatissimum Lus10016769.g I 0.737
Gorai.011G104600 Gossypium raimondii Gorai.011G104600 I 0.737
GLYMA04G11991 Glycine max GLYMA04G11991 I 0.727
MDP0000310871 Malus domestica MDP0000310871 I 0.727
Cagra.20099s0001 Capsella grandiflora Cagra.20099s0001 I 0.727
GLYMA05G09950 Glycine max GLYMA05G09950 I 0.727
Carubv10026811m.g Capsella rubella Carubv10026811m.g I 0.727
Bostr.0568s0111 Boechera stricta Bostr.0568s0111 I 0.727
Cla020438 Citrullus lanatus Cla020438 I 0.727
Bo7g064360 Brassica oleracea Bo7g064360 I 0.727
Ca_02124 Cicer arietinum Ca_02124 I 0.727
Bra012112 Brassica rapa Bra012112 I 0.727
MDP0000562305 Malus domestica MDP0000562305 I 0.727
VIT_07s0197g00040 Vitis vinifera VIT_07s0197g00040 I 0.727
GSMUA_Achr6G04670_001 Musa acuminata GSMUA_Achr6G04670_001 I 0.727
MTR_5g017950 Medicago truncatula MTR_5g017950 I 0.727
29676.m001633 Ricinus communis 29676.m001633 I 0.717
gw1.170.36.1 Physcomitrella patens gw1.170.36.1 I 0.717
Aquca_061_00084 Aquilegia coerulea Aquca_061_00084 I 0.717
Bostr.27895s0126 Boechera stricta Bostr.27895s0126 N 0.717
gene31797-v1.0-hybrid Fragaria vesca gene31797-v1.0-hybrid I 0.717
Ciclev10017910m.g Citrus clementina Ciclev10017910m.g I 0.717
gw1.170.40.1 Physcomitrella patens gw1.170.40.1 I 0.717
cassava16846.m1 Manihot esculenta cassava16846.m1 I 0.717
cassava32690.m1 Manihot esculenta cassava32690.m1 I 0.717
evm.TU.supercontig_110.17 Carica papaya evm.TU.supercontig_110.17 I 0.717
Pavir.J03307 Panicum virgatum Pavir.J03307 I 0.717
MLOC_61156 Hordeum vulgare MLOC_61156 I 0.717
GLYMA15G36310 Glycine max GLYMA15G36310 I 0.717
MTR_8g040900 Medicago truncatula MTR_8g040900 I 0.717
OB05G24560 Oryza brachyantha OB05G24560 I 0.717
ORUFI05G17830 Oryza rufipogon ORUFI05G17830 I 0.717
OGLUM05G17630 Oryza glumaepatula OGLUM05G17630 I 0.717
GLYMA13G26020 Glycine max GLYMA13G26020 I 0.717
ASL1 Arabidopsis lyrata fgenesh2_kg.8__2729__AT5G66870.1 I 0.717
BGIOSGA018046 Oryza indica BGIOSGA018046 I 0.717
PK21510.1 Cannabis sativa PK21510.1 I 0.717
Thhalv10004535m.g Eutrema salsugineum Thhalv10004535m.g I 0.717
F775_21760 Aegilops tauschii F775_21760 I 0.717
Thhalv10000525m.g Eutrema salsugineum Thhalv10000525m.g I 0.717
OS05G0417000 Oryza sativa OS05G0417000 I 0.717
ORGLA05G0143500 Oryza glaberrima ORGLA05G0143500 I 0.717
PGSC0003DMG401000764 Solanum tuberosum PGSC0003DMG401000764 I 0.717
LBD10 Arabidopsis lyrata scaffold_400352.1 I 0.717
Traes_1AL_4B89B33E3 Triticum aestivum Traes_1AL_4B89B33E3 I 0.717
Ca_18206 Cicer arietinum Ca_18206 N 0.717
Ca_02125 Cicer arietinum Ca_02125 I 0.717
Ca_20200 Cicer arietinum Ca_20200 I 0.717
orange1.1g027472m.g Citrus sinensis orange1.1g027472m.g I 0.717
Thhalv10004979m.g Eutrema salsugineum Thhalv10004979m.g I 0.707
gene28478-v1.0-hybrid Fragaria vesca gene28478-v1.0-hybrid I 0.707
gene30401-v1.0-hybrid Fragaria vesca gene30401-v1.0-hybrid I 0.707
SapurV1A.1247s0030 Salix purpurea SapurV1A.1247s0030 I 0.707
SapurV1A.0011s0490 Salix purpurea SapurV1A.0011s0490 I 0.707
MDP0000777060 Malus domestica MDP0000777060 I 0.707
Lus10027676.g Linum usitatissimum Lus10027676.g I 0.707
Lus10039940.g Linum usitatissimum Lus10039940.g I 0.707
MDP0000254288 Malus domestica MDP0000254288 I 0.707
MDP0000130659 Malus domestica MDP0000130659 I 0.707
Pavir.J03238 Panicum virgatum Pavir.J03238 I 0.707
LOB Vitis vinifera VIT_17s0000g09010 I 0.707
PRUPE_ppa015145mg Prunus persica PRUPE_ppa015145mg I 0.707
POPTR_0012s08540 Populus trichocarpa POPTR_0012s08540 I 0.707
MTR_4g105170 Medicago truncatula MTR_4g105170 I 0.707
Sb09g020440 Sorghum bicolor Sb09g020440 I 0.707
LOB Arabidopsis lyrata scaffold_802995.1 I 0.707
TCM_012190 Theobroma cacao TCM_012190 I 0.707
Si024114m.g Setaria italica Si024114m.g I 0.707
GLYMA17G09380 Glycine max GLYMA17G09380 I 0.707
GLYMA05G02530 Glycine max GLYMA05G02530 I 0.707
LOB Arabidopsis thaliana AT5G63090 D 0.707
LBD10 Arabidopsis thaliana AT2G23660 I 0.707
Bo3g104760 Brassica oleracea Bo3g104760 I 0.707
Bra038606 Brassica rapa Bra038606 I 0.707
F775_25656 Aegilops tauschii F775_25656 I 0.707
BRADI2G25270 Brachypodium distachyon BRADI2G25270 I 0.707
evm.TU.supercontig_6.423 Carica papaya evm.TU.supercontig_6.423 I 0.707
Ca_08824 Cicer arietinum Ca_08824 I 0.707
Bostr.0568s0498 Boechera stricta Bostr.0568s0498 I 0.707
mgf024603m Mimulus guttatus mgf024603m I 0.707
Cagra.2475s0001 Capsella grandiflora Cagra.2475s0001 I 0.707
Cagra.5118s0045 Capsella grandiflora Cagra.5118s0045 I 0.707
Carubv10028397m.g Capsella rubella Carubv10028397m.g I 0.707
Carubv10025704m.g Capsella rubella Carubv10025704m.g I 0.707
gw1.71.84.1 Physcomitrella patens gw1.71.84.1 I 0.707
Cucsa.196600 Cucumis sativus Cucsa.196600 I 0.707
30147.m013890 Ricinus communis 30147.m013890 I 0.707
Cla019510 Citrullus lanatus Cla019510 I 0.707
cassava16840.m1 Manihot esculenta cassava16840.m1 I 0.707
cassava19770.m1 Manihot esculenta cassava19770.m1 I 0.707
cassava33952.m1 Manihot esculenta cassava33952.m1 I 0.707
cassava32691.m1 Manihot esculenta cassava32691.m1 I 0.707
Ca_11161 Cicer arietinum Ca_11161 I 0.707
PK29334.1 Cannabis sativa PK29334.1 I 0.703