GSMUA_Achr10G20760_001 (Musa acuminata)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 GSMUA_Achr10G20760_001 T245304_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LOB
M06966_2.00
Arabidopsis thaliana
NVCGGCGGHRRHDRMGGMGGH

DCCKCCKYHDYYDCCGCCGBN
Dap-seq
OMalley et al.(2016)
LOB_col_a
0.762 0.762
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr10P20760_001 LOB 11 90

Links

Other LOB family TFs
Other Musa acuminata TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GSMUA_Achr2G23130_001 Musa acuminata GSMUA_Achr2G23130_001 I 0.912
PK18922.1 Cannabis sativa PK18922.1 I 0.842
Lus10027676.g Linum usitatissimum Lus10027676.g I 0.762
chr1.CM0171.410.nc Lotus japonicus chr1.CM0171.410.nc I 0.750
LOB Vitis vinifera VIT_17s0000g09010 I 0.750
MDP0000130659 Malus domestica MDP0000130659 I 0.750
SapurV1A.0011s0490 Salix purpurea SapurV1A.0011s0490 I 0.750
TCM_012190 Theobroma cacao TCM_012190 I 0.750
Lus10039940.g Linum usitatissimum Lus10039940.g I 0.750
Cla019510 Citrullus lanatus Cla019510 I 0.750
mgf024603m Mimulus guttatus mgf024603m I 0.750
Aquca_061_00084 Aquilegia coerulea Aquca_061_00084 I 0.750
Cucsa.196600 Cucumis sativus Cucsa.196600 I 0.750
cassava33952.m1 Manihot esculenta cassava33952.m1 I 0.750
30147.m013890 Ricinus communis 30147.m013890 I 0.750
cassava19770.m1 Manihot esculenta cassava19770.m1 I 0.750
POPTR_0015s09370 Populus trichocarpa POPTR_0015s09370 I 0.750
POPTR_0012s08540 Populus trichocarpa POPTR_0012s08540 I 0.750
MDP0000254288 Malus domestica MDP0000254288 I 0.750
GLYMA17G09380 Glycine max GLYMA17G09380 I 0.750
GLYMA05G02530 Glycine max GLYMA05G02530 I 0.750
GLYMA06G18861 Glycine max GLYMA06G18861 I 0.750
Solyc06g071660.1 Solanum lycopersicum Solyc06g071660.1 I 0.738
MTR_3g077240 Medicago truncatula MTR_3g077240 I 0.738
evm.TU.supercontig_110.17 Carica papaya evm.TU.supercontig_110.17 I 0.738
SapurV1A.1247s0030 Salix purpurea SapurV1A.1247s0030 I 0.738
GLYMA16G09720 Glycine max GLYMA16G09720 I 0.732
gene31797-v1.0-hybrid Fragaria vesca gene31797-v1.0-hybrid I 0.725
GLYMA19G00390 Glycine max GLYMA19G00390 I 0.725
PK26472.1 Cannabis sativa PK26472.1 I 0.725
Pm015649 Prunus mume Pm015649 I 0.725
Pavir.Eb00458 Panicum virgatum Pavir.Eb00458 I 0.725
SapurV1A.1328s0080 Salix purpurea SapurV1A.1328s0080 I 0.725
Bra035860 Brassica rapa Bra035860 I 0.725
Pavir.J38993 Panicum virgatum Pavir.J38993 I 0.725
GLYMA05G08870 Glycine max GLYMA05G08870 I 0.725
Ca_07463 Cicer arietinum Ca_07463 I 0.725
BRADI2G04270 Brachypodium distachyon BRADI2G04270 I 0.725
cassava12464.valid.m1 Manihot esculenta cassava12464.valid.m1 I 0.725
29917.m001993 Ricinus communis 29917.m001993 I 0.725
AC233943.1_FG002 Zea mays AC233943.1_FG002 I 0.725
ORUFI01G04670 Oryza rufipogon ORUFI01G04670 I 0.725
OS01G0169400 Oryza sativa OS01G0169400 I 0.725
PGSC0003DMG400018112 Solanum tuberosum PGSC0003DMG400018112 I 0.725
ORGLA01G0040900 Oryza glaberrima ORGLA01G0040900 I 0.725
ONIVA01G04930 Oryza nivara ONIVA01G04930 I 0.725
OGLUM01G04900 Oryza glumaepatula OGLUM01G04900 I 0.725
OMERI01G04420 Oryza meridionalis OMERI01G04420 I 0.725
PGSC0003DMG400027078 Solanum tuberosum PGSC0003DMG400027078 I 0.725
POPTR_0001s35280 Populus trichocarpa POPTR_0001s35280 I 0.725
LPERR01G04140 Leersia perrieri LPERR01G04140 I 0.725
OBART01G04470 Oryza barthii OBART01G04470 I 0.725
Si002632m.g Setaria italica Si002632m.g I 0.725
Sb03g004590 Sorghum bicolor Sb03g004590 I 0.725
gene28478-v1.0-hybrid Fragaria vesca gene28478-v1.0-hybrid I 0.725
OB01G14220 Oryza brachyantha OB01G14220 I 0.725
PRUPE_ppa018381mg Prunus persica PRUPE_ppa018381mg I 0.725
OLONG_009404 Oryza longistaminata OLONG_009404 I 0.722
MDP0000848210 Malus domestica MDP0000848210 I 0.713
orange1.1g036845m.g Citrus sinensis orange1.1g036845m.g I 0.713
LjSGA_042891.1 Lotus japonicus LjSGA_042891.1 I 0.713
GLYMA16G07770 Glycine max GLYMA16G07770 I 0.713
F775_25656 Aegilops tauschii F775_25656 I 0.713
Eucgr.J02237 Eucalyptus grandis Eucgr.J02237 I 0.713
MTR_7g033800 Medicago truncatula MTR_7g033800 I 0.713
TCM_016952 Theobroma cacao TCM_016952 I 0.713
Ciclev10022371m.g Citrus clementina Ciclev10022371m.g I 0.713
LBD25 Vitis vinifera VIT_14s0066g00680 I 0.713
GSMUA_Achr11G26500_001 Musa acuminata GSMUA_Achr11G26500_001 I 0.712
GSMUA_Achr5G25770_001 Musa acuminata GSMUA_Achr5G25770_001 I 0.712
TRIUR3_10339 Triticum urartu TRIUR3_10339 I 0.700
Ca_24372 Cicer arietinum Ca_24372 I 0.700
Solyc03g112430.1 Solanum lycopersicum Solyc03g112430.1 I 0.700
Cla010600 Citrullus lanatus Cla010600 I 0.700
Cla017388 Citrullus lanatus Cla017388 I 0.700
Cucsa.098680 Cucumis sativus Cucsa.098680 I 0.700
Cucsa.339980 Cucumis sativus Cucsa.339980 I 0.700