GSMUA_Achr2G22720_001 (Musa acuminata)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 GSMUA_Achr2G22720_001 T245322_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr2P22720_001 LOB 2 91

Links

Other LOB family TFs
Other Musa acuminata TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27524.m000293 Ricinus communis 27524.m000293 N 0.824
28207.m000107 Ricinus communis 28207.m000107 N 0.788
AMTR_s00079p00088960 Amborella trichopoda AMTR_s00079p00088960 N 0.714
Aquca_026_00293 Aquilegia coerulea Aquca_026_00293 N 0.812
BGIOSGA001546 Oryza indica BGIOSGA001546 N 0.859
Bo1g156310 Brassica oleracea Bo1g156310 N 0.707
Bo3g055690 Brassica oleracea Bo3g055690 N 0.824
Bostr.26959s0040 Boechera stricta Bostr.26959s0040 N 0.776
Bra021433 Brassica rapa Bra021433 N 0.824
BRADI4G16740 Brachypodium distachyon BRADI4G16740 N 0.717
BRADI4G16750 Brachypodium distachyon BRADI4G16750 N 0.717
Cagra.6164s0006 Capsella grandiflora Cagra.6164s0006 N 0.800
Carubv10000015m.g Capsella rubella Carubv10000015m.g N 0.753
Carubv10002654m.g Capsella rubella Carubv10002654m.g N 0.765
Carubv10021721m.g Capsella rubella Carubv10021721m.g N 0.800
cassava38982.m1 Manihot esculenta cassava38982.m1 N 0.724
cassava43296.valid.m1 Manihot esculenta cassava43296.valid.m1 N 0.714
cassava60.valid.m1 Manihot esculenta cassava60.valid.m1 N 0.824
cassava6185.valid.m1 Manihot esculenta cassava6185.valid.m1 N 0.714
Ciclev10013705m.g Citrus clementina Ciclev10013705m.g N 0.800
Ciclev10022068m.g Citrus clementina Ciclev10022068m.g N 0.800
Cla007208 Citrullus lanatus Cla007208 N 0.714
Cla019264 Citrullus lanatus Cla019264 N 0.788
Cla020705 Citrullus lanatus Cla020705 N 0.765
Cucsa.031350 Cucumis sativus Cucsa.031350 N 0.714
Cucsa.199060 Cucumis sativus Cucsa.199060 N 0.788
Cucsa.283560 Cucumis sativus Cucsa.283560 N 0.765
Eucgr.B03016 Eucalyptus grandis Eucgr.B03016 N 0.718
Eucgr.F02492 Eucalyptus grandis Eucgr.F02492 N 0.776
Eucgr.G02321 Eucalyptus grandis Eucgr.G02321 N 0.800
Eucgr.J01501 Eucalyptus grandis Eucgr.J01501 N 0.714
Eucgr.K02222 Eucalyptus grandis Eucgr.K02222 N 0.765
evm.TU.supercontig_1.42 Carica papaya evm.TU.supercontig_1.42 N 0.776
evm.TU.supercontig_282.15 Carica papaya evm.TU.supercontig_282.15 N 0.835
evm.TU.supercontig_3.514 Carica papaya evm.TU.supercontig_3.514 N 0.824
gene10300-v1.0-hybrid Fragaria vesca gene10300-v1.0-hybrid N 0.707
GLYMA08G31143 Glycine max GLYMA08G31143 N 0.718
GLYMA08G48040 Glycine max GLYMA08G48040 N 0.824
GLYMA13G07590 Glycine max GLYMA13G07590 N 0.835
GLYMA18G53440 Glycine max GLYMA18G53440 N 0.824
GLYMA19G06280 Glycine max GLYMA19G06280 N 0.824
Gorai.002G217800 Gossypium raimondii Gorai.002G217800 N 0.788
Gorai.006G061200 Gossypium raimondii Gorai.006G061200 N 0.765
GRMZM2G060544 Zea mays GRMZM2G060544 N 0.824
GRMZM2G073044 Zea mays GRMZM2G073044 N 0.788
GRMZM2G132693 Zea mays GRMZM2G132693 N 0.788
GSMUA_Achr1G20970_001 Musa acuminata GSMUA_Achr1G20970_001 N 0.800
GSMUA_Achr2G14600_001 Musa acuminata GSMUA_Achr2G14600_001 N 0.847
GSMUA_Achr3G29520_001 Musa acuminata GSMUA_Achr3G29520_001 N 0.824
GSMUA_Achr4G03700_001 Musa acuminata GSMUA_Achr4G03700_001 N 0.835
GSMUA_Achr4G06820_001 Musa acuminata GSMUA_Achr4G06820_001 N 0.724
GSMUA_Achr4G13790_001 Musa acuminata GSMUA_Achr4G13790_001 N 0.714
GSMUA_Achr9G00580_001 Musa acuminata GSMUA_Achr9G00580_001 N 0.871
GSMUA_AchrUn_randomG00460_001 Musa acuminata GSMUA_AchrUn_randomG00460_001 N 0.835
LBD40 Arabidopsis lyrata Al_scaffold_0002_1337 N 0.788
LBD40 Arabidopsis thaliana AT1G67100 N 0.800
LBD41 Arabidopsis lyrata fgenesh2_kg.3__191__AT3G02550.1 N 0.812
LBD41 Arabidopsis thaliana AT3G02550 N 0.812
LBD42 Arabidopsis thaliana AT1G68510 N 0.776
LBD42 Arabidopsis lyrata fgenesh2_kg.2__1100__AT1G68510.1 N 0.776
LPERR01G15290 Leersia perrieri LPERR01G15290 N 0.859
Lus10028470.g Linum usitatissimum Lus10028470.g N 0.812
MDP0000136037 Malus domestica MDP0000136037 N 0.824
MDP0000233303 Malus domestica MDP0000233303 N 0.788
MDP0000581845 Malus domestica MDP0000581845 N 0.738
mgf010898m Mimulus guttatus mgf010898m N 0.714
mgf011656m Mimulus guttatus mgf011656m N 0.788
mgf017960m Mimulus guttatus mgf017960m N 0.788
MLOC_58304 Hordeum vulgare MLOC_58304 N 0.800
MTR_6g018270 Medicago truncatula MTR_6g018270 N 0.812
MTR_6g453130 Medicago truncatula MTR_6g453130 N 0.706
MTR_7g007010 Medicago truncatula MTR_7g007010 N 0.824
OB01G27020 Oryza brachyantha OB01G27020 N 0.835
OBART01G17510 Oryza barthii OBART01G17510 N 0.859
OGLUM01G20320 Oryza glumaepatula OGLUM01G20320 N 0.859
OMERI01G16320 Oryza meridionalis OMERI01G16320 N 0.859
ONIVA01G19320 Oryza nivara ONIVA01G19320 N 0.859
OPUNC01G18000 Oryza punctata OPUNC01G18000 N 0.859
orange1.1g022591m.g Citrus sinensis orange1.1g022591m.g N 0.800
orange1.1g038007m.g Citrus sinensis orange1.1g038007m.g N 0.800
orange1.1g045357m.g Citrus sinensis orange1.1g045357m.g N 0.776
ORUFI01G19440 Oryza rufipogon ORUFI01G19440 N 0.859
OS01G0511000 Oryza sativa OS01G0511000 N 0.859
Pavir.Ea00650 Panicum virgatum Pavir.Ea00650 N 0.800
Pavir.Ea01295 Panicum virgatum Pavir.Ea01295 N 0.714
Pavir.J00526 Panicum virgatum Pavir.J00526 N 0.800
Pavir.J01483 Panicum virgatum Pavir.J01483 N 0.704
PGSC0003DMG400005719 Solanum tuberosum PGSC0003DMG400005719 N 0.812
PGSC0003DMG400012653 Solanum tuberosum PGSC0003DMG400012653 N 0.800
PGSC0003DMG400014547 Solanum tuberosum PGSC0003DMG400014547 N 0.776
PK03169.1 Cannabis sativa PK03169.1 N 0.800
PK04548.1 Cannabis sativa PK04548.1 N 0.706
PK04625.1 Cannabis sativa PK04625.1 N 0.860
PK25954.1 Cannabis sativa PK25954.1 N 0.739
Pm029059 Prunus mume Pm029059 N 0.765
POPTR_0004s09920 Populus trichocarpa POPTR_0004s09920 N 0.812
POPTR_0005s15670 Populus trichocarpa POPTR_0005s15670 N 0.800
POPTR_0008s11950 Populus trichocarpa POPTR_0008s11950 N 0.824
POPTR_0010s13480 Populus trichocarpa POPTR_0010s13480 N 0.788
POPTR_0012s05340 Populus trichocarpa POPTR_0012s05340 N 0.718
PRUPE_ppa011233mg Prunus persica PRUPE_ppa011233mg N 0.765
SapurV1A.0078s0410 Salix purpurea SapurV1A.0078s0410 N 0.800
SapurV1A.0079s0150 Salix purpurea SapurV1A.0079s0150 N 0.776
SapurV1A.0315s0090 Salix purpurea SapurV1A.0315s0090 N 0.800
SapurV1A.0851s0010 Salix purpurea SapurV1A.0851s0010 N 0.776
Sb01g032580 Sorghum bicolor Sb01g032580 N 0.824
Sb09g030780 Sorghum bicolor Sb09g030780 N 0.714
SELMODRAFT_37532 Selaginella moellendorffii SELMODRAFT_37532 N 0.706
SELMODRAFT_37566 Selaginella moellendorffii SELMODRAFT_37566 N 0.718
SELMODRAFT_37570 Selaginella moellendorffii SELMODRAFT_37570 N 0.718
Si002412m.g Setaria italica Si002412m.g N 0.776
Si004887m.g Setaria italica Si004887m.g N 0.765
Si022660m.g Setaria italica Si022660m.g N 0.788
Solyc02g085910.2 Solanum lycopersicum Solyc02g085910.2 N 0.800
Solyc03g119530.2 Solanum lycopersicum Solyc03g119530.2 N 0.812
Solyc05g009320.2 Solanum lycopersicum Solyc05g009320.2 N 0.788
TCM_009888 Theobroma cacao TCM_009888 N 0.812
TCM_012338 Theobroma cacao TCM_012338 N 0.753
TCM_019459 Theobroma cacao TCM_019459 N 0.824
TRAES3BF008500030CFD_g Triticum aestivum TRAES3BF008500030CFD_g N 0.776
TRAES3BF008600030CFD_g Triticum aestivum TRAES3BF008600030CFD_g N 0.776
Traes_2AL_450404EA6 Triticum aestivum Traes_2AL_450404EA6 N 0.800
Traes_2BL_3A840DB921 Triticum aestivum Traes_2BL_3A840DB921 N 0.800
Traes_2DL_9D8B5B436 Triticum aestivum Traes_2DL_9D8B5B436 N 0.800
Traes_4BL_7F70575F9 Triticum aestivum Traes_4BL_7F70575F9 N 0.765
Traes_4DL_E0847FBC5 Triticum aestivum Traes_4DL_E0847FBC5 N 0.753
Traes_5BL_3EEBE3D51 Triticum aestivum Traes_5BL_3EEBE3D51 N 0.753
Traes_5BS_3EEBE3D51 Triticum aestivum Traes_5BS_3EEBE3D51 N 0.753
VIT_01s0011g03530 Vitis vinifera VIT_01s0011g03530 N 0.788
VIT_01s0011g03540 Vitis vinifera VIT_01s0011g03540 N 0.824
VIT_14s0006g02950 Vitis vinifera VIT_14s0006g02950 N 0.707
VIT_17s0000g03720 Vitis vinifera VIT_17s0000g03720 N 0.714