GSMUA_Achr4G28810_001 (Musa acuminata)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 GSMUA_Achr4G28810_001 T245339_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LBD18
M06962_2.00
Arabidopsis thaliana
SCGGRRAWHVHGSMRNNDN

NHNNYKSCDBDWTYYCCGS
Dap-seq
OMalley et al.(2016)
LBD18_col_a
0.737 0.737
LBD18
M06963_2.00
Arabidopsis thaliana
CDBDWTTTMHGSHRN

NYDSCDKAAAWHVHG
Dap-seq
OMalley et al.(2016)
LBD18_colamp_a
0.737 0.737
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr4P28810_001 LOB 17 117

Links

Other LOB family TFs
Other Musa acuminata TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI001093 Acyrthosiphon pisum ACYPI001093 N 0.000
AATE000737 Anopheles atroparvus AATE000737 N 0.000
ACHR006808 Anopheles christyi ACHR006808 N 0.000
ACOM033873 Anopheles coluzzii ACOM033873 N 0.000
ACUA015970 Anopheles culicifacies ACUA015970 N 0.000
AEPI009643 Anopheles epiroticus AEPI009643 N 0.000
AFAF013901 Anopheles farauti AFAF013901 N 0.000
AFUN003046 Anopheles funestus AFUN003046 N 0.000
AMEC001300 Anopheles melas AMEC001300 N 0.000
AMEM002527 Anopheles merus AMEM002527 N 0.000
AMIN002205 Anopheles minimus AMIN002205 N 0.000
AQUA006471 Anopheles quadriannulatus AQUA006471 N 0.000
ASIS016921 Anopheles sinensis ASIS016921 N 0.000
ASTEI05803 Anopheles stephensi ASTEI05803 N 0.000
AARA001745 Anopheles arabiensis AARA001745 N 0.000
AALB009209 Anopheles albimanus AALB009209 N 0.000
LDEC000234 Leptinotarsa decemlineata LDEC000234 N 0.000
ADAC008723 Anopheles darlingi ADAC008723 N 0.000
AGAP001277 Anopheles gambiae AGAP001277 N 0.000
CG5934 Drosophila melanogaster FBgn0039505 N 0.000
GA19242 Drosophila pseudoobscura FBgn0079239 N 0.000
GF16281 Drosophila ananassae FBgn0093303 N 0.000
GG11541 Drosophila erecta FBgn0103838 N 0.000
GI22257 Drosophila mojavensis FBgn0144985 N 0.000
GL24486 Drosophila persimilis FBgn0162075 N 0.000
GM10383 Drosophila sechellia FBgn0165333 N 0.000
GJ24048 Drosophila virilis FBgn0211135 N 0.000
GK22576 Drosophila willistoni FBgn0224553 N 0.000
GE23729 Drosophila yakuba FBgn0240887 N 0.000
KGM_08541 Danaus plexippus KGM_08541 N 0.000
LLOJ006065 Lutzomyia longipalpis LLOJ006065 N 0.000