GSMUA_Achr5G25770_001 (Musa acuminata)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 GSMUA_Achr5G25770_001 T245348_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD6
M06955_2.00 		Arabidopsis thaliana
CGSCGGNDDHDRCGGMGRHDN
NHDYCKCCGYHDHHNCCGSCG		 Dap-seq
OMalley et al.(2016)
AS2_col_a 		0.803 0.803
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr5P25770_001 LOB 25 90

Links

Other LOB family TFs
Other Musa acuminata TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr11G26500_001 Musa acuminata GSMUA_Achr11G26500_001 I 1.000
GSMUA_Achr3G21730_001 Musa acuminata GSMUA_Achr3G21730_001 N 1.000
PK18922.1 Cannabis sativa PK18922.1 I 0.895
OBART01G39990 Oryza barthii OBART01G39990 I 0.864
OGLUM01G44190 Oryza glumaepatula OGLUM01G44190 I 0.864
OB01G48740 Oryza brachyantha OB01G48740 I 0.864
LPERR05G13240 Leersia perrieri LPERR05G13240 I 0.864
GSMUA_Achr7G23710_001 Musa acuminata GSMUA_Achr7G23710_001 I 0.864
OLONG_016086 Oryza longistaminata OLONG_016086 I 0.864
MLOC_72525 Hordeum vulgare MLOC_72525 I 0.864
TRIUR3_32863 Triticum urartu TRIUR3_32863 I 0.864
ORUFI01G43320 Oryza rufipogon ORUFI01G43320 I 0.864
LBD6 Oryza sativa OS01G0889400 I 0.864
TRAES3BF084400010CFD_g Triticum aestivum TRAES3BF084400010CFD_g I 0.864
ORGLA01G0339000 Oryza glaberrima ORGLA01G0339000 I 0.864
ONIVA01G44840 Oryza nivara ONIVA01G44840 I 0.864
OPUNC01G38680 Oryza punctata OPUNC01G38680 I 0.864
OMERI01G36900 Oryza meridionalis OMERI01G36900 I 0.864
LPERR01G34430 Leersia perrieri LPERR01G34430 I 0.864
F775_20715 Aegilops tauschii F775_20715 I 0.864
LBD6 Oryza indica BGIOSGA004955 I 0.864
BRADI2G57380 Brachypodium distachyon BRADI2G57380 I 0.848
MLOC_61156 Hordeum vulgare MLOC_61156 I 0.848
OB05G24560 Oryza brachyantha OB05G24560 I 0.848
F775_21760 Aegilops tauschii F775_21760 I 0.848
Pavir.J03307 Panicum virgatum Pavir.J03307 I 0.848
Traes_1AL_4B89B33E3 Triticum aestivum Traes_1AL_4B89B33E3 I 0.848
Pavir.Ea03589 Panicum virgatum Pavir.Ea03589 I 0.848
Si002599m.g Setaria italica Si002599m.g I 0.848
Sb03g042310 Sorghum bicolor Sb03g042310 I 0.848
GRMZM2G118250 Zea mays GRMZM2G118250 I 0.848
Pavir.J22284 Panicum virgatum Pavir.J22284 I 0.833
Pavir.J03238 Panicum virgatum Pavir.J03238 I 0.833
Pavir.J16692 Panicum virgatum Pavir.J16692 I 0.833
TRIUR3_23928 Triticum urartu TRIUR3_23928 I 0.818
BRADI2G25270 Brachypodium distachyon BRADI2G25270 I 0.818
Si024114m.g Setaria italica Si024114m.g I 0.818
Gorai.007G350300 Gossypium raimondii Gorai.007G350300 I 0.818
SapurV1A.0164s0090 Salix purpurea SapurV1A.0164s0090 I 0.803
TCM_024217 Theobroma cacao TCM_024217 I 0.803
Thhalv10019572m.g Eutrema salsugineum Thhalv10019572m.g I 0.803
SapurV1A.0093s0490 Salix purpurea SapurV1A.0093s0490 I 0.803
29929.m004500 Ricinus communis 29929.m004500 I 0.803
Cagra.10809s0001 Capsella grandiflora Cagra.10809s0001 I 0.803
Carubv10020974m.g Capsella rubella Carubv10020974m.g I 0.803
Eucgr.C02148 Eucalyptus grandis Eucgr.C02148 I 0.803
gene21541-v1.0-hybrid Fragaria vesca gene21541-v1.0-hybrid I 0.803
MDP0000273432 Malus domestica MDP0000273432 I 0.803
Bostr.26959s0351 Boechera stricta Bostr.26959s0351 I 0.803
Cla005851 Citrullus lanatus Cla005851 I 0.803
evm.TU.supercontig_39.110 Carica papaya evm.TU.supercontig_39.110 I 0.803
cassava1141.valid.m1 Manihot esculenta cassava1141.valid.m1 I 0.803
Cucsa.178830 Cucumis sativus Cucsa.178830 I 0.803
AS2 Vitis vinifera VIT_00s0340g00090 I 0.803
PRUPE_ppa027059mg Prunus persica PRUPE_ppa027059mg I 0.803
GRMZM2G133806 Zea mays GRMZM2G133806 I 0.803
Bo2g051420 Brassica oleracea Bo2g051420 I 0.803
LBD6 Arabidopsis thaliana AT1G65620 D 0.803
AS2 Arabidopsis lyrata fgenesh2_kg.2__796__AT1G65620.2 I 0.803
POPTR_0010s18460 Populus trichocarpa POPTR_0010s18460 I 0.803
Bra039733 Brassica rapa Bra039733 I 0.803
POPTR_0008s07930 Populus trichocarpa POPTR_0008s07930 I 0.803
MDP0000133546 Malus domestica MDP0000133546 I 0.788
mgf014755m Mimulus guttatus mgf014755m I 0.788
Traes_1DL_1290B6A52 Triticum aestivum Traes_1DL_1290B6A52 I 0.788
MDP0000643326 Malus domestica MDP0000643326 I 0.788
Solyc11g008830.1 Solanum lycopersicum Solyc11g008830.1 I 0.788
Solyc03g063140.2 Solanum lycopersicum Solyc03g063140.2 I 0.773
PGSC0003DMG400000974 Solanum tuberosum PGSC0003DMG400000974 I 0.773
Lus10013610.g Linum usitatissimum Lus10013610.g I 0.773
GLYMA11G17890 Glycine max GLYMA11G17890 I 0.773
Ciclev10017910m.g Citrus clementina Ciclev10017910m.g I 0.758
MTR_8g040900 Medicago truncatula MTR_8g040900 I 0.758
GSMUA_Achr2G23130_001 Musa acuminata GSMUA_Achr2G23130_001 I 0.758
GLYMA13G26020 Glycine max GLYMA13G26020 I 0.758
orange1.1g027472m.g Citrus sinensis orange1.1g027472m.g I 0.758
Ca_20200 Cicer arietinum Ca_20200 I 0.758
GLYMA15G36310 Glycine max GLYMA15G36310 I 0.758
BGIOSGA002306 Oryza indica BGIOSGA002306 I 0.742
VIT_00s0215g00010 Vitis vinifera VIT_00s0215g00010 I 0.742
GSMUA_Achr2G13400_001 Musa acuminata GSMUA_Achr2G13400_001 I 0.742
F775_25656 Aegilops tauschii F775_25656 I 0.727
Pavir.Eb00458 Panicum virgatum Pavir.Eb00458 I 0.727
Pavir.J38993 Panicum virgatum Pavir.J38993 I 0.727
GRMZM2G096064 Zea mays GRMZM2G096064 I 0.727
OB01G14220 Oryza brachyantha OB01G14220 I 0.727
TRIUR3_10339 Triticum urartu TRIUR3_10339 I 0.727
ORGLA01G0040900 Oryza glaberrima ORGLA01G0040900 I 0.727
ONIVA01G04930 Oryza nivara ONIVA01G04930 I 0.727
ORUFI01G04670 Oryza rufipogon ORUFI01G04670 I 0.727
OS01G0169400 Oryza sativa OS01G0169400 I 0.727
Sb03g004590 Sorghum bicolor Sb03g004590 I 0.727
Si002632m.g Setaria italica Si002632m.g I 0.727
OMERI01G04420 Oryza meridionalis OMERI01G04420 I 0.727
OGLUM01G04900 Oryza glumaepatula OGLUM01G04900 I 0.727
BRADI2G04270 Brachypodium distachyon BRADI2G04270 I 0.727
AC233943.1_FG002 Zea mays AC233943.1_FG002 I 0.727
LPERR01G04140 Leersia perrieri LPERR01G04140 I 0.727
cassava16846.m1 Manihot esculenta cassava16846.m1 I 0.727
OBART01G04470 Oryza barthii OBART01G04470 I 0.727
Aquca_007_00083 Aquilegia coerulea Aquca_007_00083 I 0.727
SapurV1A.0811s0020 Salix purpurea SapurV1A.0811s0020 I 0.712
SapurV1A.0641s0140 Salix purpurea SapurV1A.0641s0140 I 0.712
Bostr.0568s0111 Boechera stricta Bostr.0568s0111 I 0.712
OBART03G25970 Oryza barthii OBART03G25970 N 0.712
POPTR_0007s11460 Populus trichocarpa POPTR_0007s11460 I 0.712
cassava32691.m1 Manihot esculenta cassava32691.m1 I 0.712
gw1.170.40.1 Physcomitrella patens gw1.170.40.1 I 0.712
Carubv10026811m.g Capsella rubella Carubv10026811m.g I 0.712
Cagra.20099s0001 Capsella grandiflora Cagra.20099s0001 I 0.712
GSMUA_Achr10G20760_001 Musa acuminata GSMUA_Achr10G20760_001 I 0.712