LPERR05G04040 (Leersia perrieri)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 LPERR05G04040 T245401_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD13
M06956_2.00 		Arabidopsis thaliana
YGSCGDNDDHNVCGGHG
CDCCGBNDHHNHCGSCR		 Dap-seq
OMalley et al.(2016)
LBD13_col_a 		0.838 0.838
LBD13
M06957_2.00 		Arabidopsis thaliana
CGSCGNNDDWNNCGG
CCGNNWHHNNCGSCG		 Dap-seq
OMalley et al.(2016)
LBD13_colamp_a 		0.838 0.838
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR05G04040.1 LOB 66 164

Links

Other LOB family TFs
Other Leersia perrieri TFs

173 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OB05G14280 Oryza brachyantha OB05G14280 I 0.977
TRIUR3_18328 Triticum urartu TRIUR3_18328 I 0.973
Traes_1AS_43FB6A3CF Triticum aestivum Traes_1AS_43FB6A3CF I 0.970
Traes_1BS_8F922CA93 Triticum aestivum Traes_1BS_8F922CA93 I 0.970
OGLUM05G04450 Oryza glumaepatula OGLUM05G04450 I 0.970
F775_52636 Aegilops tauschii F775_52636 I 0.970
OS05G0165450 Oryza sativa OS05G0165450 I 0.970
ORGLA05G0042200 Oryza glaberrima ORGLA05G0042200 I 0.970
OBART05G04570 Oryza barthii OBART05G04570 I 0.970
OMERI05G04500 Oryza meridionalis OMERI05G04500 I 0.970
ONIVA05G04920 Oryza nivara ONIVA05G04920 I 0.970
MLOC_56075 Hordeum vulgare MLOC_56075 I 0.970
ORUFI05G04770 Oryza rufipogon ORUFI05G04770 I 0.970
Traes_1DS_BB8508CC6 Triticum aestivum Traes_1DS_BB8508CC6 I 0.970
BGIOSGA018747 Oryza indica BGIOSGA018747 I 0.970
BRADI2G34520 Brachypodium distachyon BRADI2G34520 I 0.949
Si012018m.g Setaria italica Si012018m.g I 0.939
Pavir.J00291 Panicum virgatum Pavir.J00291 I 0.929
Sb09g004940 Sorghum bicolor Sb09g004940 I 0.929
GRMZM5G868471 Zea mays GRMZM5G868471 I 0.919
Pavir.Ca01098 Panicum virgatum Pavir.Ca01098 I 0.919
PK21617.1 Cannabis sativa PK21617.1 I 0.913
Bo3g034980 Brassica oleracea Bo3g034980 I 0.889
Bra000188 Brassica rapa Bra000188 I 0.889
Bostr.23794s0013 Boechera stricta Bostr.23794s0013 I 0.879
LBD15 Arabidopsis lyrata fgenesh2_kg.4__2164__AT2G40470.1 I 0.879
LBD15 Arabidopsis thaliana AT2G40470 I 0.879
Cagra.1642s0010 Capsella grandiflora Cagra.1642s0010 I 0.879
Carubv10024002m.g Capsella rubella Carubv10024002m.g I 0.879
Thhalv10017905m.g Eutrema salsugineum Thhalv10017905m.g I 0.869
ONIVA01G40640 Oryza nivara ONIVA01G40640 I 0.869
OMERI01G32750 Oryza meridionalis OMERI01G32750 I 0.869
OLONG_000658 Oryza longistaminata OLONG_000658 I 0.869
Aquca_005_00169 Aquilegia coerulea Aquca_005_00169 I 0.869
PK17217.1 Cannabis sativa PK17217.1 I 0.869
OS01G0825000 Oryza sativa OS01G0825000 I 0.869
AMTR_s00007p00227160 Amborella trichopoda AMTR_s00007p00227160 I 0.869
Gorai.009G295000 Gossypium raimondii Gorai.009G295000 I 0.869
evm.TU.supercontig_19.92 Carica papaya evm.TU.supercontig_19.92 I 0.869
LBD15 Vitis vinifera VIT_13s0067g02380 I 0.869
Si004575m.g Setaria italica Si004575m.g I 0.869
ORUFI01G39050 Oryza rufipogon ORUFI01G39050 I 0.869
cassava15554.m1 Manihot esculenta cassava15554.m1 I 0.869
ORGLA01G0294900 Oryza glaberrima ORGLA01G0294900 I 0.869
TCM_045438 Theobroma cacao TCM_045438 I 0.869
GSMUA_Achr11G08330_001 Musa acuminata GSMUA_Achr11G08330_001 I 0.869
LPERR01G30700 Leersia perrieri LPERR01G30700 I 0.869
BGIOSGA004719 Oryza indica BGIOSGA004719 I 0.869
BRADI2G53690 Brachypodium distachyon BRADI2G53690 I 0.869
OGLUM01G39690 Oryza glumaepatula OGLUM01G39690 I 0.869
OBART01G35680 Oryza barthii OBART01G35680 I 0.869
MDP0000167580 Malus domestica MDP0000167580 I 0.860
Bra004572 Brassica rapa Bra004572 I 0.859
F775_25790 Aegilops tauschii F775_25790 I 0.859
TRIUR3_34193 Triticum urartu TRIUR3_34193 I 0.859
cassava20848.m1 Manihot esculenta cassava20848.m1 I 0.859
Bo4g190210 Brassica oleracea Bo4g190210 I 0.859
GRMZM2G092517 Zea mays GRMZM2G092517 I 0.859
Sb03g038410 Sorghum bicolor Sb03g038410 I 0.859
29729.m002335 Ricinus communis 29729.m002335 I 0.859
chr2.CM1032.110.nc Lotus japonicus chr2.CM1032.110.nc I 0.859
PRUPE_ppa011757mg Prunus persica PRUPE_ppa011757mg I 0.859
GSMUA_Achr7G22200_001 Musa acuminata GSMUA_Achr7G22200_001 I 0.859
Pavir.Eb03580 Panicum virgatum Pavir.Eb03580 I 0.859
Bo4g012620 Brassica oleracea Bo4g012620 I 0.859
Cla007391 Citrullus lanatus Cla007391 I 0.859
OB01G44400 Oryza brachyantha OB01G44400 I 0.859
OPUNC01G34540 Oryza punctata OPUNC01G34540 I 0.859
MLOC_16076 Hordeum vulgare MLOC_16076 I 0.859
GSMUA_AchrUn_randomG14060_001 Musa acuminata GSMUA_AchrUn_randomG14060_001 I 0.859
GSMUA_Achr5G07460_001 Musa acuminata GSMUA_Achr5G07460_001 I 0.859
Lus10024183.g Linum usitatissimum Lus10024183.g I 0.859
GLYMA06G15050 Glycine max GLYMA06G15050 I 0.848
mgf020556m Mimulus guttatus mgf020556m I 0.848
TCM_042262 Theobroma cacao TCM_042262 I 0.848
mgf011471m Mimulus guttatus mgf011471m I 0.848
Ca_04126 Cicer arietinum Ca_04126 I 0.848
Bra021627 Brassica rapa Bra021627 I 0.848
Solyc06g050430.2 Solanum lycopersicum Solyc06g050430.2 I 0.848
TRAES3BF078900060CFD_g Triticum aestivum TRAES3BF078900060CFD_g I 0.848
LBD13 Arabidopsis lyrata fgenesh2_kg.4__1005__AT2G30340.1 I 0.848
GLYMA04G39830 Glycine max GLYMA04G39830 I 0.848
Eucgr.G03121 Eucalyptus grandis Eucgr.G03121 I 0.848
PGSC0003DMG400029080 Solanum tuberosum PGSC0003DMG400029080 I 0.848
POPTR_0013s08040 Populus trichocarpa POPTR_0013s08040 I 0.848
Gorai.012G015900 Gossypium raimondii Gorai.012G015900 I 0.848
Lus10009930.g Linum usitatissimum Lus10009930.g I 0.848
Pavir.Ea03276 Panicum virgatum Pavir.Ea03276 I 0.848
Lus10034208.g Linum usitatissimum Lus10034208.g I 0.848
Gorai.003G151800 Gossypium raimondii Gorai.003G151800 I 0.848
Bo4g172950 Brassica oleracea Bo4g172950 I 0.848
gene21311-v1.0-hybrid Fragaria vesca gene21311-v1.0-hybrid I 0.848
Bra016992 Brassica rapa Bra016992 I 0.848
evm.TU.supercontig_2.327 Carica papaya evm.TU.supercontig_2.327 I 0.848
Bo4g059520 Brassica oleracea Bo4g059520 I 0.838
Bostr.24513s0205 Boechera stricta Bostr.24513s0205 I 0.838
orange1.1g027307m.g Citrus sinensis orange1.1g027307m.g I 0.838
Ciclev10032684m.g Citrus clementina Ciclev10032684m.g I 0.838
Bra018320 Brassica rapa Bra018320 I 0.838
Thhalv10017073m.g Eutrema salsugineum Thhalv10017073m.g I 0.838
Cucsa.144080 Cucumis sativus Cucsa.144080 I 0.838
Lus10029061.g Linum usitatissimum Lus10029061.g I 0.838
Ca_12420 Cicer arietinum Ca_12420 I 0.838
MTR_5g083960 Medicago truncatula MTR_5g083960 I 0.838
LBD13 Arabidopsis thaliana AT2G30340 D 0.838
OLONG_007328 Oryza longistaminata OLONG_007328 I 0.838
GLYMA14G38280 Glycine max GLYMA14G38280 I 0.838
Gorai.013G005900 Gossypium raimondii Gorai.013G005900 I 0.828
MDP0000278334 Malus domestica MDP0000278334 I 0.828
Cagra.0567s0001 Capsella grandiflora Cagra.0567s0001 I 0.828
MTR_5g075020 Medicago truncatula MTR_5g075020 I 0.828
Cucsa.326100 Cucumis sativus Cucsa.326100 I 0.828
chr1.CM0125.30.nd Lotus japonicus chr1.CM0125.30.nd I 0.828
GLYMA02G40080 Glycine max GLYMA02G40080 I 0.828
SapurV1A.0215s0070 Salix purpurea SapurV1A.0215s0070 I 0.828
POPTR_0019s14790 Populus trichocarpa POPTR_0019s14790 I 0.828
gene28137-v1.0-hybrid Fragaria vesca gene28137-v1.0-hybrid I 0.818
Ca_15642 Cicer arietinum Ca_15642 I 0.818
MTR_3g094690 Medicago truncatula MTR_3g094690 I 0.818
Carubv10024870m.g Capsella rubella Carubv10024870m.g I 0.818
Pm000277 Prunus mume Pm000277 I 0.818
LBD13 Vitis vinifera VIT_06s0004g07790 I 0.818
Solyc06g007390.2 Solanum lycopersicum Solyc06g007390.2 I 0.808
PRUPE_ppa019397mg Prunus persica PRUPE_ppa019397mg I 0.808
Eucgr.B04019 Eucalyptus grandis Eucgr.B04019 I 0.808
PGSC0003DMG400030461 Solanum tuberosum PGSC0003DMG400030461 I 0.808
gw1.156.75.1 Physcomitrella patens gw1.156.75.1 I 0.808
gw1.9.232.1 Physcomitrella patens gw1.9.232.1 I 0.808
29957.m001411 Ricinus communis 29957.m001411 I 0.808
POPTR_0013s15220 Populus trichocarpa POPTR_0013s15220 I 0.798
Solyc06g082430.1 Solanum lycopersicum Solyc06g082430.1 I 0.798
orange1.1g028221m.g Citrus sinensis orange1.1g028221m.g I 0.798
SapurV1A.0222s0070 Salix purpurea SapurV1A.0222s0070 I 0.798
Ciclev10002348m.g Citrus clementina Ciclev10002348m.g I 0.798
cassava31953.m1 Manihot esculenta cassava31953.m1 I 0.788
PGSC0003DMG400020562 Solanum tuberosum PGSC0003DMG400020562 I 0.788
LjSGA_040320.1 Lotus japonicus LjSGA_040320.1 I 0.784
PDK_20s1387061g002 Phoenix dactylifera PDK_20s1387061g002 I 0.768
SELMODRAFT_26920 Selaginella moellendorffii SELMODRAFT_26920 I 0.758
SELMODRAFT_37169 Selaginella moellendorffii SELMODRAFT_37169 I 0.758
PDK_20s1537041g001 Phoenix dactylifera PDK_20s1537041g001 N 0.746
Solyc11g045530.1 Solanum lycopersicum Solyc11g045530.1 I 0.727
LBD3 Vitis vinifera VIT_19s0027g01120 I 0.727
mgf026046m Mimulus guttatus mgf026046m I 0.727
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.727
PGSC0003DMG400008649 Solanum tuberosum PGSC0003DMG400008649 I 0.727
PK11564.1 Cannabis sativa PK11564.1 I 0.717
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I 0.717
Si037583m.g Setaria italica Si037583m.g I 0.717
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I 0.717
Bo4g190140 Brassica oleracea Bo4g190140 I 0.711
Cla006731 Citrullus lanatus Cla006731 I 0.709
Pavir.J13923 Panicum virgatum Pavir.J13923 I 0.707
BGIOSGA013249 Oryza indica BGIOSGA013249 I 0.707
Pavir.J18260 Panicum virgatum Pavir.J18260 I 0.707
cassava27818.m1 Manihot esculenta cassava27818.m1 I 0.707
Sb01g012810 Sorghum bicolor Sb01g012810 I 0.707
GRMZM2G079185 Zea mays GRMZM2G079185 I 0.707
Cla013678 Citrullus lanatus Cla013678 I 0.707
PRUPE_ppa012253mg Prunus persica PRUPE_ppa012253mg I 0.707
ORUFI03G29410 Oryza rufipogon ORUFI03G29410 I 0.707
OMERI03G24920 Oryza meridionalis OMERI03G24920 I 0.707
ONIVA03G29300 Oryza nivara ONIVA03G29300 I 0.707
Pavir.J06256 Panicum virgatum Pavir.J06256 I 0.707
Pm011040 Prunus mume Pm011040 I 0.707
gene30046-v1.0-hybrid Fragaria vesca gene30046-v1.0-hybrid I 0.707
MDP0000268890 Malus domestica MDP0000268890 I 0.707
MDP0000284409 Malus domestica MDP0000284409 I 0.707
Eucgr.E02016 Eucalyptus grandis Eucgr.E02016 I 0.707
Cucsa.118370 Cucumis sativus Cucsa.118370 I 0.707
OGLUM04G05130 Oryza glumaepatula OGLUM04G05130 I 0.707
PK03716.1 Cannabis sativa PK03716.1 I 0.706
PK29334.1 Cannabis sativa PK29334.1 I 0.703