CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_16076
(
Hordeum vulgare
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
MLOC_16076
T245420_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LBD13
M06956_2.00
Arabidopsis thaliana
YGSCGDNDDHNVCGGHG
CDCCGBNDHHNHCGSCR
Dap-seq
OMalley et al.(2016)
LBD13_col_a
0.808
0.808
LBD13
M06957_2.00
Arabidopsis thaliana
CGSCGNNDDWNNCGG
CCGNNWHHNNCGSCG
Dap-seq
OMalley et al.(2016)
LBD13_colamp_a
0.808
0.808
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_16076.1
LOB
1
55
MLLEVPEAERADAASSLVYEANLRLRDPVYGCMGAISMLQQQVNALEAELEAVRA
MLOC_16076.2
LOB
1
55
MLLEVPEAERADAASSLVYEANLRLRDPVYGCMGAISMLQQQVNALEAELEAVRA
MLOC_16076.3
LOB
103
201
PCAACKLLRRRCAHECPFAPYFSPHEPHKFAAVHKVFGASNVSKMLLEVPEAERADAASSLVYEANLRLRDPVYGCMGAISMLQQQVNALEAELEAVRA
Links
Other
LOB
family TFs
Other
Hordeum vulgare
TFs
214 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy