CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MTR_3g452660
(
Medicago truncatula
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
MTR_3g452660
T245448_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH33776
LOB
7
105
PCAACKFLRRKCTQECDFAPYFLPENPQRFANVHRVFGASNVAKLLKELDVKDREDAVKSLAYEAESRIKDPVYGCVGLISYLQQKLRETQNELTVAKK
Links
Other
LOB
family TFs
Other
Medicago truncatula
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_18206
Cicer arietinum
Ca_18206
N
0.818
GLYMA11G06210
Glycine max
GLYMA11G06210
I
0.788
MTR_5g017950
Medicago truncatula
MTR_5g017950
I
0.788
GLYMA01G39060
Glycine max
GLYMA01G39060
I
0.788
chr2.LjT16G06.10.nd
Lotus japonicus
chr2.LjT16G06.10.nd
I
0.788
Gorai.007G210500
Gossypium raimondii
Gorai.007G210500
I
0.768
MTR_3g073690
Medicago truncatula
MTR_3g073690
I
0.768
GLYMA06G11181
Glycine max
GLYMA06G11181
I
0.768
Gorai.011G104600
Gossypium raimondii
Gorai.011G104600
I
0.768
Ca_02125
Cicer arietinum
Ca_02125
I
0.758
cassava32690.m1
Manihot esculenta
cassava32690.m1
I
0.758
TCM_000560
Theobroma cacao
TCM_000560
I
0.758
Aquca_007_00083
Aquilegia coerulea
Aquca_007_00083
I
0.758
Cucsa.250570
Cucumis sativus
Cucsa.250570
I
0.758
SapurV1A.0428s0090
Salix purpurea
SapurV1A.0428s0090
I
0.758
GLYMA05G09950
Glycine max
GLYMA05G09950
I
0.758
PGSC0003DMG400010023
Solanum tuberosum
PGSC0003DMG400010023
I
0.758
PK18922.1
Cannabis sativa
PK18922.1
I
0.754
PK13228.1
Cannabis sativa
PK13228.1
I
0.750
Ca_02124
Cicer arietinum
Ca_02124
I
0.747
VIT_00s1247g00010
Vitis vinifera
VIT_00s1247g00010
I
0.747
VIT_07s0197g00020
Vitis vinifera
VIT_07s0197g00020
I
0.747
Pm026450
Prunus mume
Pm026450
I
0.747
orange1.1g039589m.g
Citrus sinensis
orange1.1g039589m.g
I
0.747
Ciclev10027275m.g
Citrus clementina
Ciclev10027275m.g
I
0.747
POPTR_0007s11460
Populus trichocarpa
POPTR_0007s11460
I
0.747
POPTR_0005s14150
Populus trichocarpa
POPTR_0005s14150
I
0.747
PRUPE_ppa026393mg
Prunus persica
PRUPE_ppa026393mg
I
0.747
MDP0000562305
Malus domestica
MDP0000562305
I
0.747
GLYMA04G11991
Glycine max
GLYMA04G11991
I
0.747
mgf004296m
Mimulus guttatus
mgf004296m
I
0.747
VIT_00s0215g00010
Vitis vinifera
VIT_00s0215g00010
I
0.741
F775_33210
Aegilops tauschii
F775_33210
I
0.740
cassava16846.m1
Manihot esculenta
cassava16846.m1
I
0.737
gene24088-v1.0-hybrid
Fragaria vesca
gene24088-v1.0-hybrid
I
0.737
gene30401-v1.0-hybrid
Fragaria vesca
gene30401-v1.0-hybrid
I
0.737
Pm010483
Prunus mume
Pm010483
I
0.737
SapurV1A.0641s0140
Salix purpurea
SapurV1A.0641s0140
I
0.737
Solyc02g090410.2
Solanum lycopersicum
Solyc02g090410.2
I
0.737
Solyc02g065150.1
Solanum lycopersicum
Solyc02g065150.1
I
0.737
Cla020438
Citrullus lanatus
Cla020438
I
0.737
PRUPE_ppa015145mg
Prunus persica
PRUPE_ppa015145mg
I
0.737
PGSC0003DMG402000764
Solanum tuberosum
PGSC0003DMG402000764
I
0.737
SapurV1A.0811s0020
Salix purpurea
SapurV1A.0811s0020
I
0.737
Carubv10026811m.g
Capsella rubella
Carubv10026811m.g
I
0.727
evm.TU.supercontig_6.423
Carica papaya
evm.TU.supercontig_6.423
I
0.727
Cagra.20099s0001
Capsella grandiflora
Cagra.20099s0001
I
0.727
Bostr.0568s0111
Boechera stricta
Bostr.0568s0111
I
0.727
Ca_11161
Cicer arietinum
Ca_11161
I
0.727
ASL1
Arabidopsis lyrata
fgenesh2_kg.8__2729__AT5G66870.1
I
0.727
cassava16840.m1
Manihot esculenta
cassava16840.m1
I
0.727
MDP0000777060
Malus domestica
MDP0000777060
I
0.727
MDP0000310871
Malus domestica
MDP0000310871
I
0.727
Thhalv10004535m.g
Eutrema salsugineum
Thhalv10004535m.g
I
0.717
Lus10022463.g
Linum usitatissimum
Lus10022463.g
I
0.717
Lus10016769.g
Linum usitatissimum
Lus10016769.g
I
0.717
Lus10005313.g
Linum usitatissimum
Lus10005313.g
I
0.717
29676.m001633
Ricinus communis
29676.m001633
I
0.717
Gorai.008G073400
Gossypium raimondii
Gorai.008G073400
I
0.717
VIT_16s0022g02050
Vitis vinifera
VIT_16s0022g02050
I
0.717
VIT_07s0197g00030
Vitis vinifera
VIT_07s0197g00030
I
0.717
PGSC0003DMG401000764
Solanum tuberosum
PGSC0003DMG401000764
I
0.717
cassava32691.m1
Manihot esculenta
cassava32691.m1
I
0.717
LBD36
Arabidopsis thaliana
AT5G66870
I
0.717
Traes_1DL_1290B6A52
Triticum aestivum
Traes_1DL_1290B6A52
I
0.708
gene21541-v1.0-hybrid
Fragaria vesca
gene21541-v1.0-hybrid
I
0.707
Bra012112
Brassica rapa
Bra012112
I
0.707
Bo7g064360
Brassica oleracea
Bo7g064360
I
0.707
PRUPE_ppa027059mg
Prunus persica
PRUPE_ppa027059mg
I
0.707
mgf014755m
Mimulus guttatus
mgf014755m
I
0.707
MDP0000197526
Malus domestica
MDP0000197526
I
0.707
MDP0000273432
Malus domestica
MDP0000273432
I
0.707
Eucgr.C02148
Eucalyptus grandis
Eucgr.C02148
I
0.707
BGIOSGA002306
Oryza indica
BGIOSGA002306
I
0.705
evm.TU.supercontig_331.6
Carica papaya
evm.TU.supercontig_331.6
I
0.702