OB05G11740 (Oryza brachyantha)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 OB05G11740 T245509_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD4
M02261_2.00 		Arabidopsis thaliana
VDNVCGSNNN
NNNSCGBNHB		 PBM
Weirauch et al.(2014)
pTH7515 		0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB05G11740.1 LOB 34 132

Links

Other LOB family TFs
Other Oryza brachyantha TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORGLA05G0016500 Oryza glaberrima ORGLA05G0016500 N 0.990
Pavir.J04684 Panicum virgatum Pavir.J04684 I 0.970
Pavir.Ca00718 Panicum virgatum Pavir.Ca00718 I 0.970
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.960
GRMZM2G165805 Zea mays GRMZM2G165805 N 0.949
Si024430m.g Setaria italica Si024430m.g N 0.949
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.949
OS05G0123000 Oryza sativa OS05G0123000 I 0.947
BGIOSGA018905 Oryza indica BGIOSGA018905 I 0.947
ORUFI05G01750 Oryza rufipogon ORUFI05G01750 I 0.947
OPUNC05G01610 Oryza punctata OPUNC05G01610 N 0.922
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.919
OPUNC05G01600 Oryza punctata OPUNC05G01600 N 0.915
GSMUA_Achr7G15500_001 Musa acuminata GSMUA_Achr7G15500_001 I 0.909
OBART05G01640 Oryza barthii OBART05G01640 N 0.904
OMERI05G01730 Oryza meridionalis OMERI05G01730 N 0.900
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.899
Traes_1DS_A31FB6CB2 Triticum aestivum Traes_1DS_A31FB6CB2 N 0.899
MLOC_68570 Hordeum vulgare MLOC_68570 N 0.899
Traes_1AS_26CB95294 Triticum aestivum Traes_1AS_26CB95294 N 0.899
Traes_1BS_CE38938A8 Triticum aestivum Traes_1BS_CE38938A8 N 0.899
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.899
GSMUA_Achr10G22970_001 Musa acuminata GSMUA_Achr10G22970_001 I 0.889
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.889
TCM_041094 Theobroma cacao TCM_041094 I 0.889
30111.m000703 Ricinus communis 30111.m000703 I 0.889
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.889
Eucgr.J01123 Eucalyptus grandis Eucgr.J01123 I 0.879
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I 0.879
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.879
TCM_043081 Theobroma cacao TCM_043081 I 0.879
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.879
MDP0000151784 Malus domestica MDP0000151784 I 0.879
ONIVA05G01850 Oryza nivara ONIVA05G01850 I 0.879
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I 0.879
PK23777.1 Cannabis sativa PK23777.1 I 0.879
MDP0000123013 Malus domestica MDP0000123013 I 0.879
PK27389.1 Cannabis sativa PK27389.1 I 0.879
CM1887.100.nc Lotus japonicus CM1887.100.nc I 0.879
mgf015666m Mimulus guttatus mgf015666m N 0.879
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.879
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.879
GLYMA20G31780 Glycine max GLYMA20G31780 I 0.879
MDP0000218986 Malus domestica MDP0000218986 I 0.869
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.869
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.869
GLYMA13G40370 Glycine max GLYMA13G40370 I 0.869
Gorai.001G129700 Gossypium raimondii Gorai.001G129700 I 0.869
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.869
MDP0000318244 Malus domestica MDP0000318244 I 0.869
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.869
MDP0000319331 Malus domestica MDP0000319331 I 0.869
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.869
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.869
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.869
Ca_04287 Cicer arietinum Ca_04287 I 0.869
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.869
GSMUA_Achr8G09700_001 Musa acuminata GSMUA_Achr8G09700_001 N 0.869
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.869
Eucgr.B02465 Eucalyptus grandis Eucgr.B02465 I 0.869
Ca_14605 Cicer arietinum Ca_14605 I 0.869
Pm000938 Prunus mume Pm000938 I 0.869
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.869
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.869
Sb01g038650 Sorghum bicolor Sb01g038650 N 0.859
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.859
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I 0.859
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.859
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.859
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.859
Cla000556 Citrullus lanatus Cla000556 I 0.859
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.859
Cla020379 Citrullus lanatus Cla020379 I 0.859
GRMZM2G021095 Zea mays GRMZM2G021095 N 0.859
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.859
Solyc11g072470.1 Solanum lycopersicum Solyc11g072470.1 I 0.859
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.859
MTR_2g093310 Medicago truncatula MTR_2g093310 I 0.859
Pavir.Ia03612 Panicum virgatum Pavir.Ia03612 N 0.859
evm.TU.supercontig_53.26 Carica papaya evm.TU.supercontig_53.26 N 0.859
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.848
gene25294-v1.0-hybrid Fragaria vesca gene25294-v1.0-hybrid I 0.848
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.848
Pm018585 Prunus mume Pm018585 I 0.848
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.848
OS03G0287400 Oryza sativa OS03G0287400 N 0.848
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.848
BGIOSGA010952 Oryza indica BGIOSGA010952 N 0.848
OMERI03G12370 Oryza meridionalis OMERI03G12370 N 0.848
GRMZM2G145568 Zea mays GRMZM2G145568 N 0.848
OGLUM03G13350 Oryza glumaepatula OGLUM03G13350 N 0.848
BGIOSGA038947 Oryza indica BGIOSGA038947 N 0.848
OBART03G13260 Oryza barthii OBART03G13260 N 0.848
OPUNC03G12790 Oryza punctata OPUNC03G12790 N 0.848
ONIVA03G14510 Oryza nivara ONIVA03G14510 N 0.848
ORGLA03G0128100 Oryza glaberrima ORGLA03G0128100 N 0.848
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I 0.848
ORUFI03G13900 Oryza rufipogon ORUFI03G13900 N 0.848
AMTR_s00080p00153120 Amborella trichopoda AMTR_s00080p00153120 N 0.848
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.838
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.838
OB03G23270 Oryza brachyantha OB03G23270 N 0.838
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.838
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.838
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.838
Si037280m.g Setaria italica Si037280m.g N 0.838
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I 0.838
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.838
MDP0000879799 Malus domestica MDP0000879799 N 0.828
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.828
Bra018675 Brassica rapa Bra018675 N 0.818
MDP0000822986 Malus domestica MDP0000822986 I 0.818
BRADI1G65760 Brachypodium distachyon BRADI1G65760 N 0.818
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.818
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.818
Solyc06g075330.1 Solanum lycopersicum Solyc06g075330.1 N 0.818
F775_02335 Aegilops tauschii F775_02335 N 0.818
mgf022524m Mimulus guttatus mgf022524m N 0.818
Traes_4BL_97EDABD02 Triticum aestivum Traes_4BL_97EDABD02 N 0.818
Bo5g008590 Brassica oleracea Bo5g008590 N 0.818
Cagra.1671s0410 Capsella grandiflora Cagra.1671s0410 N 0.808
Cla005134 Citrullus lanatus Cla005134 N 0.808
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.808
Traes_4AS_669BAF6C7 Triticum aestivum Traes_4AS_669BAF6C7 N 0.798
LPERR03G11720 Leersia perrieri LPERR03G11720 N 0.798
Ca_02507 Cicer arietinum Ca_02507 N 0.798
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N 0.798
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.798
VIT_13s0019g03750 Vitis vinifera VIT_13s0019g03750 N 0.798
Bostr.25219s0157 Boechera stricta Bostr.25219s0157 N 0.798
GSMUA_Achr4G16790_001 Musa acuminata GSMUA_Achr4G16790_001 N 0.788
Cucsa.207400 Cucumis sativus Cucsa.207400 N 0.788
PGSC0003DMG400004138 Solanum tuberosum PGSC0003DMG400004138 N 0.788
LBD11 Arabidopsis thaliana AT2G28500 N 0.788
Cla005133 Citrullus lanatus Cla005133 N 0.788
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N 0.788
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.788
mgf019622m Mimulus guttatus mgf019622m N 0.778
Bo01039s010 Brassica oleracea Bo01039s010 N 0.778
Carubv10023989m.g Capsella rubella Carubv10023989m.g N 0.778
Ciclev10032772m.g Citrus clementina Ciclev10032772m.g I 0.778
orange1.1g045080m.g Citrus sinensis orange1.1g045080m.g I 0.778
Bo8g112780 Brassica oleracea Bo8g112780 N 0.778
Bra011942 Brassica rapa Bra011942 N 0.778
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N 0.778
Bra000491 Brassica rapa Bra000491 N 0.778
Cagra.9128s0007 Capsella grandiflora Cagra.9128s0007 N 0.778
GSMUA_Achr3G17800_001 Musa acuminata GSMUA_Achr3G17800_001 N 0.778
Eucgr.E02410 Eucalyptus grandis Eucgr.E02410 N 0.775
Gorai.012G185900 Gossypium raimondii Gorai.012G185900 N 0.774
VIT_13s0019g03810 Vitis vinifera VIT_13s0019g03810 N 0.768
Bra035698 Brassica rapa Bra035698 N 0.768
Bra031599 Brassica rapa Bra031599 N 0.768
Bo4g165420 Brassica oleracea Bo4g165420 N 0.768
VIT_13s0019g03710 Vitis vinifera VIT_13s0019g03710 N 0.758
VIT_13s0019g03830 Vitis vinifera VIT_13s0019g03830 N 0.758
VIT_13s0019g03760 Vitis vinifera VIT_13s0019g03760 N 0.758
OGLUM05G01700 Oryza glumaepatula OGLUM05G01700 N 0.758
Bo3g040220 Brassica oleracea Bo3g040220 N 0.758
VIT_13s0019g03720 Vitis vinifera VIT_13s0019g03720 N 0.758
POPTR_0005s10050 Populus trichocarpa POPTR_0005s10050 I 0.750
cassava16668.m1 Manihot esculenta cassava16668.m1 N 0.745
PGSC0003DMG400025384 Solanum tuberosum PGSC0003DMG400025384 N 0.737
Cucsa.207390 Cucumis sativus Cucsa.207390 N 0.737
VIT_13s0019g03820 Vitis vinifera VIT_13s0019g03820 N 0.737
Cucsa.275710 Cucumis sativus Cucsa.275710 N 0.737
GSMUA_Achr9G04330_001 Musa acuminata GSMUA_Achr9G04330_001 N 0.727
cassava20471.m1 Manihot esculenta cassava20471.m1 I 0.727
VIT_13s0019g03840 Vitis vinifera VIT_13s0019g03840 N 0.727
Lus10031191.g Linum usitatissimum Lus10031191.g I 0.727
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.727
PK11564.1 Cannabis sativa PK11564.1 I 0.727
Cucsa.239660 Cucumis sativus Cucsa.239660 I 0.727
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I 0.717
GRMZM2G447176 Zea mays GRMZM2G447176 I 0.717
gene30046-v1.0-hybrid Fragaria vesca gene30046-v1.0-hybrid I 0.717
PGSC0003DMG400008649 Solanum tuberosum PGSC0003DMG400008649 I 0.717
Solyc11g045530.1 Solanum lycopersicum Solyc11g045530.1 I 0.717
orange1.1g044340m.g Citrus sinensis orange1.1g044340m.g I 0.717
Si037583m.g Setaria italica Si037583m.g I 0.717
MTR_2g068760 Medicago truncatula MTR_2g068760 I 0.717
Traes_5BL_CE4CF3B5C Triticum aestivum Traes_5BL_CE4CF3B5C I 0.717
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I 0.717
Cucsa.118370 Cucumis sativus Cucsa.118370 I 0.717
Sb01g012810 Sorghum bicolor Sb01g012810 I 0.717
MLOC_5148 Hordeum vulgare MLOC_5148 I 0.717
evm.TU.supercontig_192.6 Carica papaya evm.TU.supercontig_192.6 I 0.717
Ca_13575 Cicer arietinum Ca_13575 I 0.717
GRMZM2G079185 Zea mays GRMZM2G079185 I 0.717
SapurV1A.0284s0080 Salix purpurea SapurV1A.0284s0080 I 0.717
Cla013678 Citrullus lanatus Cla013678 I 0.717
F775_08326 Aegilops tauschii F775_08326 I 0.717
Ciclev10006113m.g Citrus clementina Ciclev10006113m.g I 0.717
GLYMA08G17990 Glycine max GLYMA08G17990 I 0.717
VIT_13s0019g03780 Vitis vinifera VIT_13s0019g03780 N 0.717
TRIUR3_11082 Triticum urartu TRIUR3_11082 I 0.717
OLONG_014851 Oryza longistaminata OLONG_014851 N 0.714
LjSGA_079580.1.1 Lotus japonicus LjSGA_079580.1.1 I 0.712
BRADI4G44850 Brachypodium distachyon BRADI4G44850 I 0.707
BGIOSGA013249 Oryza indica BGIOSGA013249 I 0.707
OGLUM04G05130 Oryza glumaepatula OGLUM04G05130 I 0.707
Pavir.J06256 Panicum virgatum Pavir.J06256 I 0.707
OMERI03G24920 Oryza meridionalis OMERI03G24920 I 0.707
Thhalv10008917m.g Eutrema salsugineum Thhalv10008917m.g I 0.707
Pavir.J13923 Panicum virgatum Pavir.J13923 I 0.707
GSMUA_Achr10G13050_001 Musa acuminata GSMUA_Achr10G13050_001 I 0.707
ONIVA03G29300 Oryza nivara ONIVA03G29300 I 0.707
Pavir.J18260 Panicum virgatum Pavir.J18260 I 0.707
LBD4 Arabidopsis thaliana AT1G31320 D 0.707
LBD4 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002773 I 0.707
GSMUA_Achr10G14880_001 Musa acuminata GSMUA_Achr10G14880_001 I 0.707
PRUPE_ppa012253mg Prunus persica PRUPE_ppa012253mg I 0.707
Cla005598 Citrullus lanatus Cla005598 I 0.707
Bostr.15697s0446 Boechera stricta Bostr.15697s0446 I 0.707
Cagra.1508s0061 Capsella grandiflora Cagra.1508s0061 I 0.707
Ca_06548 Cicer arietinum Ca_06548 I 0.707
Carubv10010462m.g Capsella rubella Carubv10010462m.g I 0.707
LBD3 Vitis vinifera VIT_19s0027g01120 I 0.707
Aquca_118_00035 Aquilegia coerulea Aquca_118_00035 I 0.707
Pm011040 Prunus mume Pm011040 I 0.707
cassava27818.m1 Manihot esculenta cassava27818.m1 I 0.707
cassava30732.valid.m1 Manihot esculenta cassava30732.valid.m1 I 0.707
mgf018189m Mimulus guttatus mgf018189m I 0.707
30169.m006340 Ricinus communis 30169.m006340 I 0.707
mgf026046m Mimulus guttatus mgf026046m I 0.707
LBD4 Vitis vinifera VIT_00s0125g00290 I 0.707
gene20083-v1.0-hybrid Fragaria vesca gene20083-v1.0-hybrid I 0.707
PGSC0003DMG400021204 Solanum tuberosum PGSC0003DMG400021204 I 0.707
Lus10031769.g Linum usitatissimum Lus10031769.g I 0.707
MDP0000121203 Malus domestica MDP0000121203 I 0.707
ORUFI03G29410 Oryza rufipogon ORUFI03G29410 I 0.707
MDP0000268890 Malus domestica MDP0000268890 I 0.707
OPUNC03G25820 Oryza punctata OPUNC03G25820 I 0.707
PGSC0003DMG400030456 Solanum tuberosum PGSC0003DMG400030456 I 0.707
POPTR_0007s08290 Populus trichocarpa POPTR_0007s08290 I 0.707
Solyc06g082310.2 Solanum lycopersicum Solyc06g082310.2 I 0.707
TCM_032557 Theobroma cacao TCM_032557 I 0.707
Gorai.002G104500 Gossypium raimondii Gorai.002G104500 I 0.707
PRUPE_ppa012322mg Prunus persica PRUPE_ppa012322mg I 0.707
Gorai.011G051200 Gossypium raimondii Gorai.011G051200 I 0.707
MDP0000284409 Malus domestica MDP0000284409 I 0.707