CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM08G04040
(
Oryza glumaepatula
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
OGLUM08G04040
T245584_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM08G04040.1
LOB
14
118
ACAACAHQGASSCPPNCGLAPYFPADKPKRFWYARLMFGMERILGFSEAEKQGIRPNGSTVISMAAVVYLADARVEDPILGAYGRIRKLQQQLDRLKAERARQHH
Links
Other
LOB
family TFs
Other
Oryza glumaepatula
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OLONG_000148
Oryza longistaminata
OLONG_000148
N
0.980
OBART08G03930
Oryza barthii
OBART08G03930
N
0.980
OS08G0163800
Oryza sativa
OS08G0163800
N
0.939
ORUFI08G04330
Oryza rufipogon
ORUFI08G04330
N
0.892
ONIVA08G03920
Oryza nivara
ONIVA08G03920
N
0.850
BGIOSGA028043
Oryza indica
BGIOSGA028043
N
0.850
OPUNC08G03850
Oryza punctata
OPUNC08G03850
N
0.808