OGLUM12G00350 (Oryza glumaepatula)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 OGLUM12G00350 T245590_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD4
M02261_2.00 		Arabidopsis thaliana
VDNVCGSNNN
NNNSCGBNHB		 PBM
Weirauch et al.(2014)
pTH7515 		0.747 0.747
gw1.238.28.1
M02262_2.00 		Physcomitrella patens
NNNNNVNGSN
NSCNBNNNNN		 PBM
Weirauch et al.(2014)
pTH8459 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM12G00350.1 LOB 11 109

Links

Other LOB family TFs
Other Oryza glumaepatula TFs

236 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORGLA12G0001500 Oryza glaberrima ORGLA12G0001500 I 1.000
BGIOSGA034653 Oryza indica BGIOSGA034653 I 0.980
ORGLA11G0005800 Oryza glaberrima ORGLA11G0005800 I 0.980
OS12G0106200 Oryza sativa OS12G0106200 I 0.980
OS11G0106900 Oryza sativa OS11G0106900 I 0.980
BGIOSGA036857 Oryza indica BGIOSGA036857 I 0.980
OPUNC12G00430 Oryza punctata OPUNC12G00430 I 0.970
LPERR11G00440 Leersia perrieri LPERR11G00440 I 0.939
OB12G10480 Oryza brachyantha OB12G10480 I 0.919
ORUFI11G00360 Oryza rufipogon ORUFI11G00360 N 0.919
OB11G10200 Oryza brachyantha OB11G10200 I 0.919
LPERR12G00030 Leersia perrieri LPERR12G00030 I 0.909
Si026864m.g Setaria italica Si026864m.g I 0.838
Pavir.J18260 Panicum virgatum Pavir.J18260 I 0.828
GSMUA_Achr10G13050_001 Musa acuminata GSMUA_Achr10G13050_001 I 0.818
Pavir.J13923 Panicum virgatum Pavir.J13923 I 0.818
GSMUA_Achr10G14880_001 Musa acuminata GSMUA_Achr10G14880_001 I 0.818
Pavir.J06256 Panicum virgatum Pavir.J06256 I 0.818
GRMZM2G025989 Zea mays GRMZM2G025989 I 0.798
GRMZM2G044150 Zea mays GRMZM2G044150 I 0.798
F775_08326 Aegilops tauschii F775_08326 I 0.798
Traes_5BL_CE4CF3B5C Triticum aestivum Traes_5BL_CE4CF3B5C I 0.798
Sb08g000575 Sorghum bicolor Sb08g000575 I 0.798
Traes_1BL_04EFBAECF Triticum aestivum Traes_1BL_04EFBAECF I 0.788
OB05G20740 Oryza brachyantha OB05G20740 I 0.788
LPERR05G10020 Leersia perrieri LPERR05G10020 I 0.788
MLOC_5148 Hordeum vulgare MLOC_5148 I 0.788
OMERI05G11330 Oryza meridionalis OMERI05G11330 I 0.788
BGIOSGA018244 Oryza indica BGIOSGA018244 I 0.788
ORUFI05G13610 Oryza rufipogon ORUFI05G13610 I 0.788
OS05G0346800 Oryza sativa OS05G0346800 I 0.788
Traes_1AL_DB7593004 Triticum aestivum Traes_1AL_DB7593004 I 0.788
BGIOSGA018245 Oryza indica BGIOSGA018245 I 0.788
OPUNC05G10670 Oryza punctata OPUNC05G10670 I 0.788
Sb09g016240 Sorghum bicolor Sb09g016240 I 0.788
Si024229m.g Setaria italica Si024229m.g I 0.788
ONIVA05G13090 Oryza nivara ONIVA05G13090 I 0.788
Ciclev10029962m.g Citrus clementina Ciclev10029962m.g I 0.788
OGLUM05G13250 Oryza glumaepatula OGLUM05G13250 I 0.788
MLOC_54949 Hordeum vulgare MLOC_54949 I 0.788
GSMUA_Achr6G15660_001 Musa acuminata GSMUA_Achr6G15660_001 I 0.788
TRIUR3_11082 Triticum urartu TRIUR3_11082 I 0.788
Pavir.J22399 Panicum virgatum Pavir.J22399 I 0.778
Pavir.Ca01985 Panicum virgatum Pavir.Ca01985 I 0.778
SapurV1A.0061s0670 Salix purpurea SapurV1A.0061s0670 I 0.778
Ca_12450 Cicer arietinum Ca_12450 I 0.778
PDK_20s1810211g001 Phoenix dactylifera PDK_20s1810211g001 I 0.778
OBART05G12620 Oryza barthii OBART05G12620 I 0.778
evm.TU.supercontig_19.133 Carica papaya evm.TU.supercontig_19.133 I 0.778
ORGLA05G0108100 Oryza glaberrima ORGLA05G0108100 I 0.778
Pavir.J21476 Panicum virgatum Pavir.J21476 I 0.778
PDK_20s1728161g001 Phoenix dactylifera PDK_20s1728161g001 I 0.768
Ciclev10032929m.g Citrus clementina Ciclev10032929m.g I 0.768
GLYMA02G43030 Glycine max GLYMA02G43030 I 0.768
MDP0000265429 Malus domestica MDP0000265429 I 0.768
GLYMA14G06140 Glycine max GLYMA14G06140 I 0.768
orange1.1g036782m.g Citrus sinensis orange1.1g036782m.g I 0.768
Lus10031285.g Linum usitatissimum Lus10031285.g I 0.768
Pm018982 Prunus mume Pm018982 I 0.768
mgf018189m Mimulus guttatus mgf018189m I 0.768
MTR_5g083230 Medicago truncatula MTR_5g083230 I 0.768
PRUPE_ppa012275mg Prunus persica PRUPE_ppa012275mg I 0.768
Si011647m.g Setaria italica Si011647m.g I 0.768
Pm000193 Prunus mume Pm000193 I 0.768
LjSGA_062507.1.1 Lotus japonicus LjSGA_062507.1.1 I 0.759
PGSC0003DMG400030456 Solanum tuberosum PGSC0003DMG400030456 I 0.758
PRUPE_ppa012504mg Prunus persica PRUPE_ppa012504mg I 0.758
SapurV1A.0673s0190 Salix purpurea SapurV1A.0673s0190 I 0.758
BRADI4G44850 Brachypodium distachyon BRADI4G44850 I 0.758
TCM_032557 Theobroma cacao TCM_032557 I 0.758
GLYMA08G17990 Glycine max GLYMA08G17990 I 0.758
GLYMA18G02780 Glycine max GLYMA18G02780 I 0.758
29729.m002278 Ricinus communis 29729.m002278 I 0.758
gene28202-v1.0-hybrid Fragaria vesca gene28202-v1.0-hybrid I 0.758
Aquca_030_00227 Aquilegia coerulea Aquca_030_00227 I 0.758
cassava20865.m1 Manihot esculenta cassava20865.m1 I 0.758
Gorai.010G195100 Gossypium raimondii Gorai.010G195100 I 0.758
PDK_20s1342451g001 Phoenix dactylifera PDK_20s1342451g001 I 0.758
POPTR_0008s07280 Populus trichocarpa POPTR_0008s07280 I 0.758
GLYMA15G13410 Glycine max GLYMA15G13410 I 0.758
Solyc06g082310.2 Solanum lycopersicum Solyc06g082310.2 I 0.758
Ca_13388 Cicer arietinum Ca_13388 I 0.758
Lus10031855.g Linum usitatissimum Lus10031855.g I 0.758
TCM_042447 Theobroma cacao TCM_042447 I 0.758
VIT_13s0067g01880 Vitis vinifera VIT_13s0067g01880 I 0.747
LBD4 Vitis vinifera VIT_00s0125g00290 I 0.747
ASL5 Vitis vinifera VIT_06s0004g07200 I 0.747
LBD4 Arabidopsis thaliana AT1G31320 D 0.747
Ca_08998 Cicer arietinum Ca_08998 I 0.747
Cla009336 Citrullus lanatus Cla009336 I 0.747
evm.TU.supercontig_2.374 Carica papaya evm.TU.supercontig_2.374 I 0.747
Lus10017431.g Linum usitatissimum Lus10017431.g I 0.747
MDP0000121203 Malus domestica MDP0000121203 I 0.747
Lus10007525.g Linum usitatissimum Lus10007525.g I 0.747
Gorai.011G290800 Gossypium raimondii Gorai.011G290800 I 0.747
Gorai.004G234100 Gossypium raimondii Gorai.004G234100 I 0.747
MDP0000155138 Malus domestica MDP0000155138 I 0.747
MDP0000861160 Malus domestica MDP0000861160 I 0.747
SapurV1A.0094s0480 Salix purpurea SapurV1A.0094s0480 I 0.747
SapurV1A.0059s0540 Salix purpurea SapurV1A.0059s0540 I 0.747
SapurV1A.0042s0120 Salix purpurea SapurV1A.0042s0120 I 0.747
orange1.1g044340m.g Citrus sinensis orange1.1g044340m.g I 0.747
Gorai.003G149600 Gossypium raimondii Gorai.003G149600 I 0.747
Gorai.002G104500 Gossypium raimondii Gorai.002G104500 I 0.747
Cagra.1508s0061 Capsella grandiflora Cagra.1508s0061 I 0.747
Bostr.15697s0446 Boechera stricta Bostr.15697s0446 I 0.747
Thhalv10008917m.g Eutrema salsugineum Thhalv10008917m.g I 0.747
cassava27818.m1 Manihot esculenta cassava27818.m1 I 0.747
Carubv10010462m.g Capsella rubella Carubv10010462m.g I 0.747
Ciclev10006113m.g Citrus clementina Ciclev10006113m.g I 0.747
gene21039-v1.0-hybrid Fragaria vesca gene21039-v1.0-hybrid I 0.747
gene20083-v1.0-hybrid Fragaria vesca gene20083-v1.0-hybrid I 0.747
Eucgr.G03089 Eucalyptus grandis Eucgr.G03089 I 0.747
Eucgr.F04424 Eucalyptus grandis Eucgr.F04424 I 0.747
cassava26200.m1 Manihot esculenta cassava26200.m1 I 0.747
TCM_029315 Theobroma cacao TCM_029315 I 0.747
chr4.CM0229.130.nc Lotus japonicus chr4.CM0229.130.nc I 0.747
Bra014907 Brassica rapa Bra014907 I 0.747
PRUPE_ppa012322mg Prunus persica PRUPE_ppa012322mg I 0.747
POPTR_0003s14880 Populus trichocarpa POPTR_0003s14880 I 0.747
OPUNC03G25820 Oryza punctata OPUNC03G25820 I 0.747
POPTR_0010s19180 Populus trichocarpa POPTR_0010s19180 I 0.747
GLYMA09G02510 Glycine max GLYMA09G02510 I 0.747
POPTR_0001s11610 Populus trichocarpa POPTR_0001s11610 I 0.747
LBD4 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002773 I 0.747
GLYMA18G06530 Glycine max GLYMA18G06530 I 0.747
GLYMA20G02850 Glycine max GLYMA20G02850 I 0.747
PK21617.1 Cannabis sativa PK21617.1 I 0.739
PGSC0003DMG400023939 Solanum tuberosum PGSC0003DMG400023939 I 0.737
Bostr.29246s0022 Boechera stricta Bostr.29246s0022 I 0.737
Bo4g170770 Brassica oleracea Bo4g170770 I 0.737
Carubv10025543m.g Capsella rubella Carubv10025543m.g I 0.737
Aquca_118_00035 Aquilegia coerulea Aquca_118_00035 I 0.737
Gorai.009G149900 Gossypium raimondii Gorai.009G149900 I 0.737
mgf019461m Mimulus guttatus mgf019461m I 0.737
Gorai.010G170700 Gossypium raimondii Gorai.010G170700 I 0.737
POPTR_0001s28840 Populus trichocarpa POPTR_0001s28840 I 0.737
GLYMA15G41020 Glycine max GLYMA15G41020 I 0.737
GSMUA_Achr9G18030_001 Musa acuminata GSMUA_Achr9G18030_001 I 0.737
Ciclev10016993m.g Citrus clementina Ciclev10016993m.g I 0.737
GSMUA_Achr2G13170_001 Musa acuminata GSMUA_Achr2G13170_001 I 0.737
Eucgr.E02016 Eucalyptus grandis Eucgr.E02016 I 0.737
Bo7g041000 Brassica oleracea Bo7g041000 I 0.737
Lus10031191.g Linum usitatissimum Lus10031191.g I 0.737
chr3.CM0176.110.nc Lotus japonicus chr3.CM0176.110.nc I 0.737
MTR_3g071590 Medicago truncatula MTR_3g071590 I 0.737
Bra021612 Brassica rapa Bra021612 I 0.737
Bra018335 Brassica rapa Bra018335 I 0.737
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I 0.737
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I 0.737
MDP0000194766 Malus domestica MDP0000194766 I 0.737
chr6.CM0738.260.nd Lotus japonicus chr6.CM0738.260.nd I 0.737
ASL5 Arabidopsis lyrata fgenesh2_kg.4__983__AT2G30130.1 I 0.737
Ca_13575 Cicer arietinum Ca_13575 I 0.737
Cla007354 Citrullus lanatus Cla007354 I 0.737
orange1.1g031034m.g Citrus sinensis orange1.1g031034m.g I 0.737
Sb01g012810 Sorghum bicolor Sb01g012810 I 0.737
orange1.1g038565m.g Citrus sinensis orange1.1g038565m.g I 0.737
Ca_06548 Cicer arietinum Ca_06548 I 0.737
LBD12 Arabidopsis thaliana AT2G30130 I 0.737
TCM_042212 Theobroma cacao TCM_042212 I 0.737
PK24688.1 Cannabis sativa PK24688.1 I 0.737
Solyc06g050950.2 Solanum lycopersicum Solyc06g050950.2 I 0.737
Si037583m.g Setaria italica Si037583m.g I 0.737
PRUPE_ppa012253mg Prunus persica PRUPE_ppa012253mg I 0.737
Pm011040 Prunus mume Pm011040 I 0.737
30169.m006340 Ricinus communis 30169.m006340 I 0.737
Cucsa.236600 Cucumis sativus Cucsa.236600 I 0.737
cassava2872.m1 Manihot esculenta cassava2872.m1 I 0.737
cassava30732.valid.m1 Manihot esculenta cassava30732.valid.m1 I 0.737
Cucsa.144430 Cucumis sativus Cucsa.144430 I 0.737
MDP0000284409 Malus domestica MDP0000284409 I 0.737
GLYMA07G35000 Glycine max GLYMA07G35000 I 0.737
Gorai.011G051200 Gossypium raimondii Gorai.011G051200 I 0.737
cassava20471.m1 Manihot esculenta cassava20471.m1 I 0.737
POPTR_0009s08060 Populus trichocarpa POPTR_0009s08060 I 0.737
MDP0000268890 Malus domestica MDP0000268890 I 0.737
Bo4g059700 Brassica oleracea Bo4g059700 I 0.737
ORUFI01G46340 Oryza rufipogon ORUFI01G46340 I 0.733
OBART02G29970 Oryza barthii OBART02G29970 N 0.731
GLYMA11G29450 Glycine max GLYMA11G29450 I 0.727
Lus10040638.g Linum usitatissimum Lus10040638.g I 0.727
GRMZM2G079185 Zea mays GRMZM2G079185 I 0.727
SapurV1A.0566s0080 Salix purpurea SapurV1A.0566s0080 I 0.727
GSMUA_Achr3G10050_001 Musa acuminata GSMUA_Achr3G10050_001 I 0.727
PGSC0003DMG400008649 Solanum tuberosum PGSC0003DMG400008649 I 0.727
Bo3g024350 Brassica oleracea Bo3g024350 I 0.727
Cucsa.118370 Cucumis sativus Cucsa.118370 I 0.727
PK11564.1 Cannabis sativa PK11564.1 I 0.727
gw1.238.28.1 Physcomitrella patens gw1.238.28.1 D 0.727
BGIOSGA013249 Oryza indica BGIOSGA013249 I 0.727
Cla013678 Citrullus lanatus Cla013678 I 0.727
Solyc11g045530.1 Solanum lycopersicum Solyc11g045530.1 I 0.727
LBD3 Vitis vinifera VIT_19s0027g01120 I 0.727
SELMODRAFT_49085 Selaginella moellendorffii SELMODRAFT_49085 I 0.727
gw1.66.118.1 Physcomitrella patens gw1.66.118.1 I 0.727
mgf026046m Mimulus guttatus mgf026046m I 0.727
Eucgr.J00175 Eucalyptus grandis Eucgr.J00175 I 0.727
evm.TU.supercontig_192.6 Carica papaya evm.TU.supercontig_192.6 I 0.727
MTR_4g083680 Medicago truncatula MTR_4g083680 I 0.727
gene30046-v1.0-hybrid Fragaria vesca gene30046-v1.0-hybrid I 0.727
GSMUA_Achr5G29470_001 Musa acuminata GSMUA_Achr5G29470_001 I 0.727
OGLUM04G05130 Oryza glumaepatula OGLUM04G05130 I 0.727
Bra022780 Brassica rapa Bra022780 I 0.727
ORUFI03G29410 Oryza rufipogon ORUFI03G29410 I 0.727
ONIVA03G29300 Oryza nivara ONIVA03G29300 I 0.727
OMERI03G24920 Oryza meridionalis OMERI03G24920 I 0.727
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.717
Eucgr.B03991 Eucalyptus grandis Eucgr.B03991 I 0.717
PGSC0003DMG400021204 Solanum tuberosum PGSC0003DMG400021204 I 0.717
e_gw1.192.35.1 Physcomitrella patens e_gw1.192.35.1 I 0.717
SapurV1A.0284s0080 Salix purpurea SapurV1A.0284s0080 I 0.717
POPTR_0007s08290 Populus trichocarpa POPTR_0007s08290 I 0.717
Lus10031769.g Linum usitatissimum Lus10031769.g I 0.717
MTR_3g031660 Medicago truncatula MTR_3g031660 I 0.717
Lus10018275.g Linum usitatissimum Lus10018275.g I 0.717
LPERR03G23450 Leersia perrieri LPERR03G23450 I 0.717
MTR_2g068760 Medicago truncatula MTR_2g068760 I 0.717
SELMODRAFT_49084 Selaginella moellendorffii SELMODRAFT_49084 I 0.717
LjSGA_079580.1.1 Lotus japonicus LjSGA_079580.1.1 I 0.712
POPTR_0005s10050 Populus trichocarpa POPTR_0005s10050 I 0.712
Traes_4DS_DA077BB06 Triticum aestivum Traes_4DS_DA077BB06 I 0.707
SELMODRAFT_48883 Selaginella moellendorffii SELMODRAFT_48883 I 0.707
SELMODRAFT_58936 Selaginella moellendorffii SELMODRAFT_58936 I 0.707
OMERI01G39870 Oryza meridionalis OMERI01G39870 I 0.707
GSMUA_Achr8G02800_001 Musa acuminata GSMUA_Achr8G02800_001 I 0.707
GRMZM5G873586 Zea mays GRMZM5G873586 I 0.707
orange1.1g041989m.g Citrus sinensis orange1.1g041989m.g I 0.707
Traes_4BS_E9E0C550B Triticum aestivum Traes_4BS_E9E0C550B I 0.707
Ciclev10006208m.g Citrus clementina Ciclev10006208m.g I 0.707
TRIUR3_11841 Triticum urartu TRIUR3_11841 I 0.707
Cucsa.239660 Cucumis sativus Cucsa.239660 I 0.707
Cla013598 Citrullus lanatus Cla013598 I 0.707
mgf022958m Mimulus guttatus mgf022958m I 0.707
OBART03G28270 Oryza barthii OBART03G28270 I 0.705
OB05G14280 Oryza brachyantha OB05G14280 I 0.701