OMERI01G36900 (Oryza meridionalis)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 OMERI01G36900 T245620_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LBD6
M06955_2.00
Arabidopsis thaliana
CGSCGGNDDHDRCGGMGRHDN

NHDYCKCCGYHDHHNCCGSCG
Dap-seq
OMalley et al.(2016)
AS2_col_a
0.848 0.848
LOB
M06966_2.00
Arabidopsis thaliana
NVCGGCGGHRRHDRMGGMGGH

DCCKCCKYHDYYDCCGCCGBN
Dap-seq
OMalley et al.(2016)
LOB_col_a
0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI01G36900.1 LOB 38 136
OMERI01G36900.2 LOB 38 136

Links

Other LOB family TFs
Other Oryza meridionalis TFs

248 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CADAFLAG00012243 Aspergillus flavus CADAFLAG00012243 N 0.000
estExt_Genewise1Plus.C_10560 Mycosphaerella fijiensis estExt_Genewise1Plus.C_10560 N 0.000
OIDMADRAFT_74156 Oidiodendron maius OIDMADRAFT_74156 N 0.000
MYCFIDRAFT_54726 Pseudocercospora fijiensis MYCFIDRAFT_54726 N 0.000