ORUFI05G01750 (Oryza rufipogon)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 ORUFI05G01750 T245765_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LBD4
M02261_2.00
Arabidopsis thaliana
VDNVCGSNNN

NNNSCGBNHB
PBM
Weirauch et al.(2014)
pTH7515
0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI05G01750.1 LOB 9 65

Links

Other LOB family TFs
Other Oryza rufipogon TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30169.m006340 Ricinus communis 30169.m006340 I 0.702
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.825
AMTR_s00032p00142260 Amborella trichopoda AMTR_s00032p00142260 I 0.702
Aquca_118_00035 Aquilegia coerulea Aquca_118_00035 I 0.702
BGIOSGA018905 Oryza indica BGIOSGA018905 I 1.000
Bo5g008590 Brassica oleracea Bo5g008590 N 0.702
Bostr.15697s0446 Boechera stricta Bostr.15697s0446 I 0.702
Bra018675 Brassica rapa Bra018675 N 0.702
BRADI2G37960 Brachypodium distachyon BRADI2G37960 N 0.754
BRADI4G44850 Brachypodium distachyon BRADI4G44850 I 0.702
Cagra.1508s0061 Capsella grandiflora Cagra.1508s0061 I 0.702
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.737
Carubv10010462m.g Capsella rubella Carubv10010462m.g I 0.702
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.825
cassava26200.m1 Manihot esculenta cassava26200.m1 I 0.702
cassava27818.m1 Manihot esculenta cassava27818.m1 I 0.702
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.860
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.789
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.825
Ca_02507 Cicer arietinum Ca_02507 N 0.737
Ca_04287 Cicer arietinum Ca_04287 I 0.825
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.789
Ciclev10006113m.g Citrus clementina Ciclev10006113m.g I 0.719
Ciclev10029962m.g Citrus clementina Ciclev10029962m.g I 0.702
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.737
Ciclev10032929m.g Citrus clementina Ciclev10032929m.g I 0.702
Cla000556 Citrullus lanatus Cla000556 I 0.807
Cla005133 Citrullus lanatus Cla005133 N 0.702
Cla013678 Citrullus lanatus Cla013678 I 0.702
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.789
Cucsa.118370 Cucumis sativus Cucsa.118370 I 0.702
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.789
Cucsa.239660 Cucumis sativus Cucsa.239660 I 0.719
evm.TU.supercontig_2.374 Carica papaya evm.TU.supercontig_2.374 I 0.702
F775_02335 Aegilops tauschii F775_02335 N 0.719
F775_08326 Aegilops tauschii F775_08326 I 0.702
gene20083-v1.0-hybrid Fragaria vesca gene20083-v1.0-hybrid I 0.702
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.772
GLYMA08G17990 Glycine max GLYMA08G17990 I 0.719
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.807
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.807
Gorai.002G104500 Gossypium raimondii Gorai.002G104500 I 0.702
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.842
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.825
Gorai.011G290800 Gossypium raimondii Gorai.011G290800 I 0.719
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.789
GSMUA_Achr3G17800_001 Musa acuminata GSMUA_Achr3G17800_001 N 0.719
LBD4 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002773 I 0.702
LBD4 Vitis vinifera VIT_00s0125g00290 I 0.702
LBD4 Arabidopsis thaliana AT1G31320 D 0.702
LjSGA_079580.1.1 Lotus japonicus LjSGA_079580.1.1 I 0.712
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.807
Lus10031769.g Linum usitatissimum Lus10031769.g I 0.719
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.807
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.807
MDP0000121203 Malus domestica MDP0000121203 I 0.702
MDP0000123013 Malus domestica MDP0000123013 I 0.807
MDP0000151784 Malus domestica MDP0000151784 I 0.807
MDP0000268890 Malus domestica MDP0000268890 I 0.702
MDP0000284409 Malus domestica MDP0000284409 I 0.702
MDP0000822986 Malus domestica MDP0000822986 I 0.754
MDP0000879799 Malus domestica MDP0000879799 N 0.754
mgf022958m Mimulus guttatus mgf022958m I 0.702
mgf026046m Mimulus guttatus mgf026046m I 0.702
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.825
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.789
OB03G23270 Oryza brachyantha OB03G23270 N 0.737
OB05G11740 Oryza brachyantha OB05G11740 I 0.947
OBART05G12620 Oryza barthii OBART05G12620 I 0.702
OGLUM05G01700 Oryza glumaepatula OGLUM05G01700 N 0.702
OMERI05G01730 Oryza meridionalis OMERI05G01730 N 0.933
ONIVA05G01850 Oryza nivara ONIVA05G01850 I 0.912
OPUNC05G01600 Oryza punctata OPUNC05G01600 N 0.932
orange1.1g036782m.g Citrus sinensis orange1.1g036782m.g I 0.702
orange1.1g044340m.g Citrus sinensis orange1.1g044340m.g I 0.719
ORGLA05G0108100 Oryza glaberrima ORGLA05G0108100 I 0.702
OS05G0123000 Oryza sativa OS05G0123000 I 1.000
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.754
PDK_20s1376911g004 Phoenix dactylifera PDK_20s1376911g004 I 0.807
PDK_20s1595351g001 Phoenix dactylifera PDK_20s1595351g001 N 0.737
PGSC0003DMG400008649 Solanum tuberosum PGSC0003DMG400008649 I 0.702
PGSC0003DMG400025384 Solanum tuberosum PGSC0003DMG400025384 N 0.789
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.846
PK09808.1 Cannabis sativa PK09808.1 I 0.702
PK11564.1 Cannabis sativa PK11564.1 I 0.719
Pm010668 Prunus mume Pm010668 I 0.702
Pm011040 Prunus mume Pm011040 I 0.702
Pm018585 Prunus mume Pm018585 I 0.772
POPTR_0005s10050 Populus trichocarpa POPTR_0005s10050 I 0.750
POPTR_0007s08290 Populus trichocarpa POPTR_0007s08290 I 0.719
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.825
POPTR_0008s07280 Populus trichocarpa POPTR_0008s07280 I 0.702
POPTR_0010s19180 Populus trichocarpa POPTR_0010s19180 I 0.702
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.842
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.825
PRUPE_ppa012253mg Prunus persica PRUPE_ppa012253mg I 0.702
PRUPE_ppa012322mg Prunus persica PRUPE_ppa012322mg I 0.702
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.789
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.842
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.842
SapurV1A.0061s0670 Salix purpurea SapurV1A.0061s0670 I 0.702
SapurV1A.0673s0190 Salix purpurea SapurV1A.0673s0190 I 0.702
Sb05g000550 Sorghum bicolor Sb05g000550 I 0.702
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.895
Si011647m.g Setaria italica Si011647m.g I 0.702
Si026864m.g Setaria italica Si026864m.g I 0.702
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.702
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.825
Solyc11g045530.1 Solanum lycopersicum Solyc11g045530.1 I 0.702
TCM_042447 Theobroma cacao TCM_042447 I 0.702
TCM_043081 Theobroma cacao TCM_043081 I 0.825
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.719
Thhalv10008917m.g Eutrema salsugineum Thhalv10008917m.g I 0.702
Traes_4AS_669BAF6C7 Triticum aestivum Traes_4AS_669BAF6C7 N 0.702
Traes_5BL_CE4CF3B5C Triticum aestivum Traes_5BL_CE4CF3B5C I 0.702
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.789
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.807
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.807
VIT_13s0019g03820 Vitis vinifera VIT_13s0019g03820 N 0.737
VIT_13s0019g03830 Vitis vinifera VIT_13s0019g03830 N 0.719
VIT_13s0019g03840 Vitis vinifera VIT_13s0019g03840 N 0.719
VIT_13s0067g01880 Vitis vinifera VIT_13s0067g01880 I 0.702