OS01G0169400 (Oryza sativa)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 OS01G0169400 T245778_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LOB
M06966_2.00
Arabidopsis thaliana
NVCGGCGGHRRHDRMGGMGGH

DCCKCCKYHDYYDCCGCCGBN
Dap-seq
OMalley et al.(2016)
LOB_col_a
0.909 0.909
LBD6
M06955_2.00
Arabidopsis thaliana
CGSCGGNDDHDRCGGMGRHDN

NHDYCKCCGYHDHHNCCGSCG
Dap-seq
OMalley et al.(2016)
AS2_col_a
0.768 0.768
gw1.238.28.1
M02262_2.00
Physcomitrella patens
NNNNNVNGSN

NSCNBNNNNN
PBM
Weirauch et al.(2014)
pTH8459
0.717 0.717
LBD4
M02261_2.00
Arabidopsis thaliana
VDNVCGSNNN

NNNSCGBNHB
PBM
Weirauch et al.(2014)
pTH7515
0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS01T0169400-01 LOB 30 128

Links

Other LOB family TFs
Other Oryza sativa TFs

370 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cmyd_10000491 Chelonia mydas Cmyd_10000491 I 0.000
ENSACAG00000022533 Anolis carolinensis ENSACAG00000022533 I 0.000
ENSAMEG00000016851 Ailuropoda melanoleuca ENSAMEG00000016851 I 0.000
ENSBTAP00000001420-D1 Bos grunniens ENSBTAP00000001420-D1 I 0.000
ENSCSAG00000011345 Chlorocebus sabaeus ENSCSAG00000011345 I 0.000
ENSETEG00000008987 Echinops telfairi ENSETEG00000008987 I 0.000
ENSETEG00000009984 Echinops telfairi ENSETEG00000009984 N 0.000
ENSLACG00000014014 Latimeria chalumnae ENSLACG00000014014 N 0.000
ENSLAFG00000007483 Loxodonta africana ENSLAFG00000007483 I 0.000
ENSLAFG00000027348 Loxodonta africana ENSLAFG00000027348 N 0.000
ENSLAFG00000028299 Loxodonta africana ENSLAFG00000028299 I 0.000
ENSLAFG00000030880 Loxodonta africana ENSLAFG00000030880 I 0.000
ENSLAFG00000032042 Loxodonta africana ENSLAFG00000032042 I 0.000
ENSLOCG00000013832 Lepisosteus oculatus ENSLOCG00000013832 N 0.000
ENSMEUG00000013135 Macropus eugenii ENSMEUG00000013135 I 0.000
ENSMLUG00000006411 Myotis lucifugus ENSMLUG00000006411 I 0.000
ENSMLUG00000025140 Myotis lucifugus ENSMLUG00000025140 I 0.000
ENSMPUG00000009017 Mustela putorius furo ENSMPUG00000009017 I 0.000
ENSNLEG00000009730 Nomascus leucogenys ENSNLEG00000009730 I 0.000
ENSOCUG00000001138 Oryctolagus cuniculus ENSOCUG00000001138 I 0.000
ENSOCUG00000022109 Oryctolagus cuniculus ENSOCUG00000022109 I 0.000
ENSP00000269305 Macaca fascicularis ENSP00000269305 I 0.000
ENSPANG00000024061 Papio anubis ENSPANG00000024061 I 0.000
ENSPPYG00000007934 Pongo abelii ENSPPYG00000007934 I 0.000
ENSPSIG00000013302 Pelodiscus sinensis ENSPSIG00000013302 I 0.000
ENSSHAG00000015510 Sarcophilus harrisii ENSSHAG00000015510 I 0.000
ENSSTOG00000022774 Ictidomys tridecemlineatus ENSSTOG00000022774 I 0.000
LOC100910954 Rattus norvegicus ENSRNOG00000046657 I 0.000
Myotis_brandtii_TP53_10021059 Myotis brandtii Myotis_brandtii_TP53_10021059 I 0.000
Pvit_02042 Pogona vitticeps Pvit_02042 N 0.000
TP53 Sorex araneus ENSSARG00000006206 I 0.000
Tp53 Rattus norvegicus ENSRNOG00000010756 I 0.000
TP53 Sus scrofa ENSSSCG00000017950 I 0.000
TP53 Tursiops truncatus ENSTTRG00000010250 I 0.000
TP53 Canis familiaris ENSCAFG00000016714 I 0.000
TP53 Bos taurus ENSBTAG00000001069 I 0.000
TP53 Gorilla gorilla ENSGGOG00000009786 I 0.000
TP53 Procavia capensis ENSPCAG00000012725 I 0.000
TP53 Homo sapiens ENSG00000141510 D 0.000
TP53 Felis catus ENSFCAG00000009623 I 0.000
TP53 Erinaceus europaeus ENSEEUG00000014573 I 0.000
TP53 Equus caballus ENSECAG00000008126 I 0.000
TP53 Dasypus novemcinctus ENSDNOG00000005252 I 0.000
tp53 Danio rerio ENSDARG00000035559 I 0.000
TP53 Microcebus murinus ENSMICG00000014853 I 0.000
TP53 Cavia porcellus ENSCPOG00000014252 I 0.000
TP53 Callithrix jacchus ENSCJAG00000014978 I 0.000
TP53 Macaca mulatta ENSMMUG00000008639 I 0.000
TP53 Otolemur garnettii ENSOGAG00000016871 I 0.000
TP53 Ochotona princeps ENSOPRG00000006441 I 0.000
TP53 Pan troglodytes ENSPTRG00000008703 I 0.000
Trp53 Mus musculus ENSMUSG00000059552 D 0.000