PGSC0003DMG400021509 (Solanum tuberosum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 PGSC0003DMG400021509 T245830_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400055393 LOB 2 104

Links

Other LOB family TFs
Other Solanum tuberosum TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc04g077990.2 Solanum lycopersicum Solyc04g077990.2 N 0.959
evm.TU.supercontig_21.100 Carica papaya evm.TU.supercontig_21.100 N 0.827
VIT_18s0001g09250 Vitis vinifera VIT_18s0001g09250 N 0.827
MDP0000487015 Malus domestica MDP0000487015 N 0.796
MDP0000747679 Malus domestica MDP0000747679 N 0.796
cassava22449.valid.m1 Manihot esculenta cassava22449.valid.m1 N 0.796
orange1.1g029809m.g Citrus sinensis orange1.1g029809m.g N 0.796
Ciclev10003746m.g Citrus clementina Ciclev10003746m.g N 0.796
PRUPE_ppa014964mg Prunus persica PRUPE_ppa014964mg N 0.786
30170.m013752 Ricinus communis 30170.m013752 N 0.786
PK03977.1 Cannabis sativa PK03977.1 N 0.786
POPTR_0014s01770 Populus trichocarpa POPTR_0014s01770 N 0.786
cassava35733.valid.m1 Manihot esculenta cassava35733.valid.m1 N 0.786
Pm005389 Prunus mume Pm005389 N 0.786
PK25954.1 Cannabis sativa PK25954.1 N 0.783
SapurV1A.0845s0090 Salix purpurea SapurV1A.0845s0090 N 0.776
SapurV1A.2860s0030 Salix purpurea SapurV1A.2860s0030 N 0.776
POPTR_0002s12020 Populus trichocarpa POPTR_0002s12020 N 0.776
Eucgr.F00115 Eucalyptus grandis Eucgr.F00115 N 0.773
SapurV1A.0116s0210 Salix purpurea SapurV1A.0116s0210 N 0.765
PK15647.1 Cannabis sativa PK15647.1 N 0.765
Solyc02g092550.2 Solanum lycopersicum Solyc02g092550.2 N 0.765
PGSC0003DMG400024936 Solanum tuberosum PGSC0003DMG400024936 N 0.765
Gorai.007G056300 Gossypium raimondii Gorai.007G056300 N 0.765
Lus10018697.g Linum usitatissimum Lus10018697.g N 0.765
cassava7497.valid.m1 Manihot esculenta cassava7497.valid.m1 N 0.765
gene02557-v1.0-hybrid Fragaria vesca gene02557-v1.0-hybrid N 0.765
POPTR_0007s10010 Populus trichocarpa POPTR_0007s10010 N 0.765
SapurV1A.0476s0230 Salix purpurea SapurV1A.0476s0230 N 0.758
POPTR_0005s18900 Populus trichocarpa POPTR_0005s18900 N 0.755
TCM_000766 Theobroma cacao TCM_000766 N 0.755
cassava226.valid.m1 Manihot esculenta cassava226.valid.m1 N 0.755
evm.TU.supercontig_106.63 Carica papaya evm.TU.supercontig_106.63 N 0.755
Gorai.009G218800 Gossypium raimondii Gorai.009G218800 N 0.755
Lus10007758.g Linum usitatissimum Lus10007758.g N 0.755
Cucsa.352730 Cucumis sativus Cucsa.352730 N 0.755
29661.m000902 Ricinus communis 29661.m000902 N 0.755
Ca_02208 Cicer arietinum Ca_02208 N 0.755
Ca_09342 Cicer arietinum Ca_09342 N 0.755
TCM_034722 Theobroma cacao TCM_034722 N 0.755
Cla020920 Citrullus lanatus Cla020920 N 0.755
GLYMA11G05280 Glycine max GLYMA11G05280 N 0.755
GLYMA01G40010 Glycine max GLYMA01G40010 N 0.755
GLYMA05G22120 Glycine max GLYMA05G22120 N 0.755
MDP0000151330 Malus domestica MDP0000151330 N 0.753
MDP0000239820 Malus domestica MDP0000239820 N 0.753
Eucgr.H02293 Eucalyptus grandis Eucgr.H02293 N 0.745
VIT_03s0091g00670 Vitis vinifera VIT_03s0091g00670 N 0.745
GLYMA14G09750 Glycine max GLYMA14G09750 N 0.745
MTR_4g095600 Medicago truncatula MTR_4g095600 N 0.745
mgf016064m Mimulus guttatus mgf016064m N 0.745
Cucsa.103050 Cucumis sativus Cucsa.103050 N 0.745
GLYMA17G17540 Glycine max GLYMA17G17540 N 0.745
Cla014228 Citrullus lanatus Cla014228 N 0.745
evm.TU.supercontig_6.40 Carica papaya evm.TU.supercontig_6.40 N 0.745
MTR_5g015880 Medicago truncatula MTR_5g015880 N 0.745
gene05722-v1.0-hybrid Fragaria vesca gene05722-v1.0-hybrid N 0.745
MDP0000794101 Malus domestica MDP0000794101 N 0.745
chr4.CM0128.270.nc Lotus japonicus chr4.CM0128.270.nc N 0.745
Lus10011530.g Linum usitatissimum Lus10011530.g N 0.745
Lus10019292.g Linum usitatissimum Lus10019292.g N 0.745
Gorai.010G025100 Gossypium raimondii Gorai.010G025100 N 0.745
Gorai.008G081100 Gossypium raimondii Gorai.008G081100 N 0.745
Gorai.007G222000 Gossypium raimondii Gorai.007G222000 N 0.745
AMTR_s00137p00087340 Amborella trichopoda AMTR_s00137p00087340 N 0.735
Carubv10005616m.g Capsella rubella Carubv10005616m.g N 0.735
Ciclev10026374m.g Citrus clementina Ciclev10026374m.g N 0.735
GSMUA_Achr3G18860_001 Musa acuminata GSMUA_Achr3G18860_001 N 0.735
orange1.1g026365m.g Citrus sinensis orange1.1g026365m.g N 0.735
Cagra.10957s0002 Capsella grandiflora Cagra.10957s0002 N 0.735
SELMODRAFT_37570 Selaginella moellendorffii SELMODRAFT_37570 N 0.735
SELMODRAFT_27399 Selaginella moellendorffii SELMODRAFT_27399 N 0.735
SELMODRAFT_105005 Selaginella moellendorffii SELMODRAFT_105005 N 0.735
GSMUA_Achr7G26260_001 Musa acuminata GSMUA_Achr7G26260_001 N 0.735
SELMODRAFT_37566 Selaginella moellendorffii SELMODRAFT_37566 N 0.735
28152.m000905 Ricinus communis 28152.m000905 N 0.732
SapurV1A.0019s0260 Salix purpurea SapurV1A.0019s0260 N 0.724
cassava9459.m1 Manihot esculenta cassava9459.m1 N 0.724
POPTR_0009s09270 Populus trichocarpa POPTR_0009s09270 N 0.724
VIT_07s0129g00330 Vitis vinifera VIT_07s0129g00330 N 0.724
Bra011772 Brassica rapa Bra011772 N 0.724
Bostr.7867s1612 Boechera stricta Bostr.7867s1612 N 0.724
SapurV1A.0336s0110 Salix purpurea SapurV1A.0336s0110 N 0.724
gw1.167.132.1 Physcomitrella patens gw1.167.132.1 N 0.724
LBD38 Arabidopsis thaliana AT3G49940 N 0.724
GSMUA_Achr3G30130_001 Musa acuminata GSMUA_Achr3G30130_001 N 0.724
Thhalv10026086m.g Eutrema salsugineum Thhalv10026086m.g N 0.724
Aquca_042_00143 Aquilegia coerulea Aquca_042_00143 N 0.724
Bo1g003550 Brassica oleracea Bo1g003550 N 0.724
GLYMA17G35440 Glycine max GLYMA17G35440 N 0.724
Bo7g118580 Brassica oleracea Bo7g118580 N 0.714
PK03075.1 Cannabis sativa PK03075.1 N 0.714
MDP0000581845 Malus domestica MDP0000581845 N 0.714
LBD38 Arabidopsis lyrata scaffold_502015.1 N 0.714
LBD39 Arabidopsis lyrata fgenesh2_kg.7__297__AT4G37540.1 N 0.714
OB03G31560 Oryza brachyantha OB03G31560 N 0.714
AMTR_s00137p00051070 Amborella trichopoda AMTR_s00137p00051070 N 0.714
Cagra.4491s0014 Capsella grandiflora Cagra.4491s0014 N 0.714
Carubv10017944m.g Capsella rubella Carubv10017944m.g N 0.714
gw1.41.215.1 Physcomitrella patens gw1.41.215.1 N 0.714
Ciclev10029274m.g Citrus clementina Ciclev10029274m.g N 0.714
e_gw1.19.226.1 Physcomitrella patens e_gw1.19.226.1 N 0.714
mgf016023m Mimulus guttatus mgf016023m N 0.711
ORUFI03G23490 Oryza rufipogon ORUFI03G23490 N 0.704
PGSC0003DMG400025752 Solanum tuberosum PGSC0003DMG400025752 N 0.704
OS03G0445700 Oryza sativa OS03G0445700 N 0.704
Pavir.J18418 Panicum virgatum Pavir.J18418 N 0.704
Bostr.6864s0247 Boechera stricta Bostr.6864s0247 N 0.704
Bo7g063630 Brassica oleracea Bo7g063630 N 0.704
Thhalv10010666m.g Eutrema salsugineum Thhalv10010666m.g N 0.704
Bo9g018500 Brassica oleracea Bo9g018500 N 0.704
BGIOSGA010454 Oryza indica BGIOSGA010454 N 0.704
GSMUA_Achr6G07770_001 Musa acuminata GSMUA_Achr6G07770_001 N 0.704
LBD39 Arabidopsis thaliana AT4G37540 N 0.704
LPERR03G19360 Leersia perrieri LPERR03G19360 N 0.704
GRMZM2G044902 Zea mays GRMZM2G044902 N 0.704
GSMUA_Achr4G14150_001 Musa acuminata GSMUA_Achr4G14150_001 N 0.704
OBART03G22820 Oryza barthii OBART03G22820 N 0.704
GLYMA10G40421 Glycine max GLYMA10G40421 N 0.704
OLONG_015384 Oryza longistaminata OLONG_015384 N 0.704
OMERI03G20600 Oryza meridionalis OMERI03G20600 N 0.704
Bra037847 Brassica rapa Bra037847 N 0.704
Bra017831 Brassica rapa Bra017831 N 0.704
Bra012164 Brassica rapa Bra012164 N 0.704
OGLUM03G23580 Oryza glumaepatula OGLUM03G23580 N 0.704
OPUNC03G21330 Oryza punctata OPUNC03G21330 N 0.704
ONIVA03G24370 Oryza nivara ONIVA03G24370 N 0.704
ORGLA03G0213800 Oryza glaberrima ORGLA03G0213800 N 0.704
Sb01g031790 Sorghum bicolor Sb01g031790 N 0.701