PGSC0003DMG400027718 (Solanum tuberosum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 PGSC0003DMG400027718 T245840_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400071281 LOB 11 109

Links

Other LOB family TFs
Other Solanum tuberosum TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc03g095940.1 Solanum lycopersicum Solyc03g095940.1 N 1.000
PK28345.1 Cannabis sativa PK28345.1 N 0.897
PK29334.1 Cannabis sativa PK29334.1 I 0.875
mgf019866m Mimulus guttatus mgf019866m N 0.859
LBD21 Vitis vinifera VIT_13s0067g01450 N 0.848
Gorai.011G291500 Gossypium raimondii Gorai.011G291500 N 0.838
POPTR_0010s19340 Populus trichocarpa POPTR_0010s19340 N 0.838
evm.TU.supercontig_19.151 Carica papaya evm.TU.supercontig_19.151 N 0.838
Cucsa.136740 Cucumis sativus Cucsa.136740 N 0.832
Eucgr.G03078 Eucalyptus grandis Eucgr.G03078 N 0.828
GLYMA02G43220 Glycine max GLYMA02G43220 N 0.828
cassava41267.m1 Manihot esculenta cassava41267.m1 N 0.828
29814.m000742 Ricinus communis 29814.m000742 N 0.828
Lus10028986.g Linum usitatissimum Lus10028986.g N 0.828
GLYMA14G06270 Glycine max GLYMA14G06270 N 0.828
POPTR_0008s07150 Populus trichocarpa POPTR_0008s07150 N 0.828
LjSGA_139647.1 Lotus japonicus LjSGA_139647.1 N 0.821
SapurV1A.0061s0510 Salix purpurea SapurV1A.0061s0510 N 0.818
orange1.1g036565m.g Citrus sinensis orange1.1g036565m.g N 0.818
cassava20837.m1 Manihot esculenta cassava20837.m1 N 0.818
Ciclev10032862m.g Citrus clementina Ciclev10032862m.g N 0.818
GLYMA11G35500 Glycine max GLYMA11G35500 N 0.818
GLYMA18G02910 Glycine max GLYMA18G02910 N 0.818
PK13190.1 Cannabis sativa PK13190.1 N 0.811
MTR_5g083010 Medicago truncatula MTR_5g083010 N 0.808
TCM_042466 Theobroma cacao TCM_042466 N 0.808
MDP0000220708 Malus domestica MDP0000220708 N 0.808
MDP0000943252 Malus domestica MDP0000943252 N 0.808
SapurV1A.0650s0120 Salix purpurea SapurV1A.0650s0120 N 0.808
gene21008-v1.0-hybrid Fragaria vesca gene21008-v1.0-hybrid N 0.808
Gorai.013G016900 Gossypium raimondii Gorai.013G016900 N 0.808
PRUPE_ppa012284mg Prunus persica PRUPE_ppa012284mg N 0.798
Pm018957 Prunus mume Pm018957 N 0.798
chr6.LjB02K20.190.nd Lotus japonicus chr6.LjB02K20.190.nd N 0.798
MTR_3g071420 Medicago truncatula MTR_3g071420 N 0.788
Ca_12464 Cicer arietinum Ca_12464 N 0.788
Thhalv10021674m.g Eutrema salsugineum Thhalv10021674m.g N 0.768
LBD21 Arabidopsis thaliana AT3G11090 N 0.758
Bostr.19424s1045 Boechera stricta Bostr.19424s1045 N 0.758
Cagra.1655s0059 Capsella grandiflora Cagra.1655s0059 N 0.758
LBD21 Arabidopsis lyrata fgenesh2_kg.3__1152__AT3G11090.1 N 0.758
Carubv10015898m.g Capsella rubella Carubv10015898m.g N 0.758
Bo5g136860 Brassica oleracea Bo5g136860 N 0.727
Bra034867 Brassica rapa Bra034867 N 0.727
F775_33210 Aegilops tauschii F775_33210 I 0.726
evm.TU.supercontig_331.6 Carica papaya evm.TU.supercontig_331.6 I 0.702