PRUPE_ppa019397mg (Prunus persica)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 PRUPE_ppa019397mg T245928_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LBD13
M06956_2.00
Arabidopsis thaliana
YGSCGDNDDHNVCGGHG

CDCCGBNDHHNHCGSCR
Dap-seq
OMalley et al.(2016)
LBD13_col_a
0.859 0.859
LBD13
M06957_2.00
Arabidopsis thaliana
CGSCGNNDDWNNCGG

CCGNNWHHNNCGSCG
Dap-seq
OMalley et al.(2016)
LBD13_colamp_a
0.859 0.859
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ07718 LOB 55 153

Links

Other LOB family TFs
Other Prunus persica TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29729.m002335 Ricinus communis 29729.m002335 I 0.879
29957.m001411 Ricinus communis 29957.m001411 I 0.869
AMTR_s00007p00227160 Amborella trichopoda AMTR_s00007p00227160 I 0.869
Aquca_005_00169 Aquilegia coerulea Aquca_005_00169 I 0.879
LBD13 Arabidopsis thaliana AT2G30340 D 0.859
LBD15 Arabidopsis thaliana AT2G40470 I 0.848
BGIOSGA004719 Oryza indica BGIOSGA004719 I 0.818
BGIOSGA018747 Oryza indica BGIOSGA018747 I 0.828
Bo3g034980 Brassica oleracea Bo3g034980 I 0.848
Bo4g012620 Brassica oleracea Bo4g012620 I 0.838
Bo4g059520 Brassica oleracea Bo4g059520 I 0.859
Bo4g172950 Brassica oleracea Bo4g172950 I 0.869
Bo4g190140 Brassica oleracea Bo4g190140 I 0.763
Bo4g190210 Brassica oleracea Bo4g190210 I 0.848
Bostr.23794s0013 Boechera stricta Bostr.23794s0013 I 0.848
Bostr.24513s0205 Boechera stricta Bostr.24513s0205 I 0.859
Bra000188 Brassica rapa Bra000188 I 0.848
Bra004572 Brassica rapa Bra004572 I 0.838
Bra016992 Brassica rapa Bra016992 I 0.838
Bra018320 Brassica rapa Bra018320 I 0.859
Bra021627 Brassica rapa Bra021627 I 0.869
BRADI2G34520 Brachypodium distachyon BRADI2G34520 I 0.788
BRADI2G53690 Brachypodium distachyon BRADI2G53690 I 0.818
Cagra.0567s0001 Capsella grandiflora Cagra.0567s0001 I 0.859
Cagra.1642s0010 Capsella grandiflora Cagra.1642s0010 I 0.848
Carubv10024002m.g Capsella rubella Carubv10024002m.g I 0.848
Carubv10024870m.g Capsella rubella Carubv10024870m.g I 0.848
cassava15554.m1 Manihot esculenta cassava15554.m1 I 0.879
cassava20848.m1 Manihot esculenta cassava20848.m1 I 0.879
cassava31953.m1 Manihot esculenta cassava31953.m1 I 0.869
Ca_04126 Cicer arietinum Ca_04126 I 0.869
Ca_12420 Cicer arietinum Ca_12420 I 0.859
Ca_15642 Cicer arietinum Ca_15642 I 0.848
chr1.CM0125.30.nd Lotus japonicus chr1.CM0125.30.nd I 0.859
chr2.CM1032.110.nc Lotus japonicus chr2.CM1032.110.nc I 0.848
Ciclev10002348m.g Citrus clementina Ciclev10002348m.g I 0.869
Ciclev10032684m.g Citrus clementina Ciclev10032684m.g I 0.859
Cla007391 Citrullus lanatus Cla007391 I 0.869
Cucsa.144080 Cucumis sativus Cucsa.144080 I 0.869
Cucsa.326100 Cucumis sativus Cucsa.326100 I 0.828
Eucgr.B04019 Eucalyptus grandis Eucgr.B04019 I 0.879
Eucgr.G03121 Eucalyptus grandis Eucgr.G03121 I 0.889
evm.TU.supercontig_19.92 Carica papaya evm.TU.supercontig_19.92 I 0.859
evm.TU.supercontig_2.327 Carica papaya evm.TU.supercontig_2.327 I 0.889
F775_25790 Aegilops tauschii F775_25790 I 0.818
F775_52636 Aegilops tauschii F775_52636 I 0.808
LBD13 Arabidopsis lyrata fgenesh2_kg.4__1005__AT2G30340.1 I 0.869
LBD15 Arabidopsis lyrata fgenesh2_kg.4__2164__AT2G40470.1 I 0.848
gene21311-v1.0-hybrid Fragaria vesca gene21311-v1.0-hybrid I 0.869
gene28137-v1.0-hybrid Fragaria vesca gene28137-v1.0-hybrid I 0.879
GLYMA02G40080 Glycine max GLYMA02G40080 I 0.879
GLYMA04G39830 Glycine max GLYMA04G39830 I 0.879
GLYMA06G15050 Glycine max GLYMA06G15050 I 0.879
GLYMA14G38280 Glycine max GLYMA14G38280 I 0.889
Gorai.003G151800 Gossypium raimondii Gorai.003G151800 I 0.879
Gorai.009G295000 Gossypium raimondii Gorai.009G295000 I 0.879
Gorai.012G015900 Gossypium raimondii Gorai.012G015900 I 0.848
Gorai.013G005900 Gossypium raimondii Gorai.013G005900 I 0.879
GRMZM2G092517 Zea mays GRMZM2G092517 I 0.808
GRMZM5G868471 Zea mays GRMZM5G868471 I 0.818
GSMUA_Achr11G08330_001 Musa acuminata GSMUA_Achr11G08330_001 I 0.848
GSMUA_Achr5G07460_001 Musa acuminata GSMUA_Achr5G07460_001 I 0.828
GSMUA_Achr7G22200_001 Musa acuminata GSMUA_Achr7G22200_001 I 0.808
GSMUA_AchrUn_randomG14060_001 Musa acuminata GSMUA_AchrUn_randomG14060_001 I 0.838
gw1.156.75.1 Physcomitrella patens gw1.156.75.1 I 0.838
gw1.9.232.1 Physcomitrella patens gw1.9.232.1 I 0.838
LPERR01G30700 Leersia perrieri LPERR01G30700 I 0.818
LPERR05G04040 Leersia perrieri LPERR05G04040 I 0.808
Lus10009930.g Linum usitatissimum Lus10009930.g I 0.899
Lus10024183.g Linum usitatissimum Lus10024183.g I 0.899
Lus10029061.g Linum usitatissimum Lus10029061.g I 0.778
Lus10034208.g Linum usitatissimum Lus10034208.g I 0.778
MDP0000278334 Malus domestica MDP0000278334 I 0.879
mgf011471m Mimulus guttatus mgf011471m I 0.879
mgf020556m Mimulus guttatus mgf020556m I 0.848
MLOC_16076 Hordeum vulgare MLOC_16076 I 0.818
MLOC_56075 Hordeum vulgare MLOC_56075 I 0.808
MTR_3g094690 Medicago truncatula MTR_3g094690 I 0.859
MTR_5g075020 Medicago truncatula MTR_5g075020 I 0.889
MTR_5g083960 Medicago truncatula MTR_5g083960 I 0.859
OB01G44400 Oryza brachyantha OB01G44400 I 0.828
OB05G14280 Oryza brachyantha OB05G14280 I 0.758
OBART01G35680 Oryza barthii OBART01G35680 I 0.818
OBART05G04570 Oryza barthii OBART05G04570 I 0.828
OGLUM01G39690 Oryza glumaepatula OGLUM01G39690 I 0.818
OGLUM05G04450 Oryza glumaepatula OGLUM05G04450 I 0.828
OLONG_000658 Oryza longistaminata OLONG_000658 I 0.818
OLONG_007328 Oryza longistaminata OLONG_007328 I 0.747
OMERI01G32750 Oryza meridionalis OMERI01G32750 I 0.818
OMERI05G04500 Oryza meridionalis OMERI05G04500 I 0.828
ONIVA01G40640 Oryza nivara ONIVA01G40640 I 0.818
ONIVA05G04920 Oryza nivara ONIVA05G04920 I 0.828
OPUNC01G34540 Oryza punctata OPUNC01G34540 I 0.828
orange1.1g027307m.g Citrus sinensis orange1.1g027307m.g I 0.859
orange1.1g028221m.g Citrus sinensis orange1.1g028221m.g I 0.869
ORGLA01G0294900 Oryza glaberrima ORGLA01G0294900 I 0.818
ORGLA05G0042200 Oryza glaberrima ORGLA05G0042200 I 0.828
ORUFI01G39050 Oryza rufipogon ORUFI01G39050 I 0.818
ORUFI05G04770 Oryza rufipogon ORUFI05G04770 I 0.828
OS01G0825000 Oryza sativa OS01G0825000 I 0.818
OS05G0165450 Oryza sativa OS05G0165450 I 0.828
Pavir.Ca01098 Panicum virgatum Pavir.Ca01098 I 0.818
Pavir.Ea03276 Panicum virgatum Pavir.Ea03276 I 0.808
Pavir.Eb03580 Panicum virgatum Pavir.Eb03580 I 0.818
Pavir.J00291 Panicum virgatum Pavir.J00291 I 0.828
PDK_20s1387061g002 Phoenix dactylifera PDK_20s1387061g002 I 0.768
PGSC0003DMG400020562 Solanum tuberosum PGSC0003DMG400020562 I 0.859
PGSC0003DMG400029080 Solanum tuberosum PGSC0003DMG400029080 I 0.838
PGSC0003DMG400030461 Solanum tuberosum PGSC0003DMG400030461 I 0.848
PK17217.1 Cannabis sativa PK17217.1 I 0.879
Pm000277 Prunus mume Pm000277 I 0.980
POPTR_0013s08040 Populus trichocarpa POPTR_0013s08040 I 0.869
POPTR_0013s15220 Populus trichocarpa POPTR_0013s15220 I 0.848
POPTR_0019s14790 Populus trichocarpa POPTR_0019s14790 I 0.859
PRUPE_ppa011757mg Prunus persica PRUPE_ppa011757mg I 0.879
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.707
SapurV1A.0215s0070 Salix purpurea SapurV1A.0215s0070 I 0.859
SapurV1A.0222s0070 Salix purpurea SapurV1A.0222s0070 I 0.848
Sb03g038410 Sorghum bicolor Sb03g038410 I 0.818
Sb09g004940 Sorghum bicolor Sb09g004940 I 0.828
SELMODRAFT_26920 Selaginella moellendorffii SELMODRAFT_26920 I 0.818
SELMODRAFT_37169 Selaginella moellendorffii SELMODRAFT_37169 I 0.818
Si004575m.g Setaria italica Si004575m.g I 0.828
Si012018m.g Setaria italica Si012018m.g I 0.838
Solyc06g007390.2 Solanum lycopersicum Solyc06g007390.2 I 0.869
Solyc06g050430.2 Solanum lycopersicum Solyc06g050430.2 I 0.838
Solyc06g082430.1 Solanum lycopersicum Solyc06g082430.1 I 0.859
TCM_042262 Theobroma cacao TCM_042262 I 0.899
TCM_045438 Theobroma cacao TCM_045438 I 0.879
Thhalv10017073m.g Eutrema salsugineum Thhalv10017073m.g I 0.859
Thhalv10017905m.g Eutrema salsugineum Thhalv10017905m.g I 0.838
TRAES3BF078900060CFD_g Triticum aestivum TRAES3BF078900060CFD_g I 0.808
Traes_1AS_43FB6A3CF Triticum aestivum Traes_1AS_43FB6A3CF I 0.808
Traes_1BS_8F922CA93 Triticum aestivum Traes_1BS_8F922CA93 I 0.808
Traes_1DS_BB8508CC6 Triticum aestivum Traes_1DS_BB8508CC6 I 0.808
TRIUR3_34193 Triticum urartu TRIUR3_34193 I 0.818
LBD13 Vitis vinifera VIT_06s0004g07790 I 0.859
LBD15 Vitis vinifera VIT_13s0067g02380 I 0.879