CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Sb03g035920
(
Sorghum bicolor
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
Sb03g035920
T245971_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb03g035920.1
LOB
42
145
PCGACKFLRRRCVPGCVFAPHFGGSGGGGAGAAQFAAVHKVFGASNVAKMLSRVPVALRRDAASTVCYEAQARIADPVYGCVGTILALQHQVALVQAELSIAQT
Links
Other
LOB
family TFs
Other
Sorghum bicolor
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J15413
Panicum virgatum
Pavir.J15413
N
1.000
Si004290m.g
Setaria italica
Si004290m.g
N
0.980
GRMZM2G025758
Zea mays
GRMZM2G025758
N
0.960
Pavir.J25219
Panicum virgatum
Pavir.J25219
N
0.929
BRADI2G51310
Brachypodium distachyon
BRADI2G51310
N
0.869
ONIVA01G36850
Oryza nivara
ONIVA01G36850
N
0.838
OGLUM01G36730
Oryza glumaepatula
OGLUM01G36730
N
0.838
OMERI01G29510
Oryza meridionalis
OMERI01G29510
N
0.838
BGIOSGA000736
Oryza indica
BGIOSGA000736
N
0.838
OBART01G32570
Oryza barthii
OBART01G32570
N
0.838
ORGLA07G0240800
Oryza glaberrima
ORGLA07G0240800
N
0.838
ORUFI01G35770
Oryza rufipogon
ORUFI01G35770
N
0.828
OPUNC01G31580
Oryza punctata
OPUNC01G31580
N
0.828
OS01G0772100
Oryza sativa
OS01G0772100
N
0.828
LPERR01G28060
Leersia perrieri
LPERR01G28060
N
0.828
GLYMA02G27230
Glycine max
GLYMA02G27230
I
0.727
SELMODRAFT_49270
Selaginella moellendorffii
SELMODRAFT_49270
I
0.724
SELMODRAFT_59642
Selaginella moellendorffii
SELMODRAFT_59642
I
0.724
LBD20
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_3000301
I
0.717
Carubv10015417m.g
Capsella rubella
Carubv10015417m.g
I
0.717
Cagra.2098s0013
Capsella grandiflora
Cagra.2098s0013
I
0.717
Bra036436
Brassica rapa
Bra036436
I
0.717
Thhalv10021301m.g
Eutrema salsugineum
Thhalv10021301m.g
I
0.717
Bo1g153580
Brassica oleracea
Bo1g153580
I
0.717
LBD20
Arabidopsis thaliana
AT3G03760
I
0.717
Bostr.19046s0098
Boechera stricta
Bostr.19046s0098
I
0.717
gw1.42.84.1
Physcomitrella patens
gw1.42.84.1
I
0.713
orange1.1g042813m.g
Citrus sinensis
orange1.1g042813m.g
I
0.707
PRUPE_ppa024802mg
Prunus persica
PRUPE_ppa024802mg
I
0.707
GLYMA10G11031
Glycine max
GLYMA10G11031
I
0.707
GSMUA_Achr9G10530_001
Musa acuminata
GSMUA_Achr9G10530_001
I
0.707
Gorai.008G114400
Gossypium raimondii
Gorai.008G114400
I
0.707
Eucgr.K01522
Eucalyptus grandis
Eucgr.K01522
I
0.707
mgf006429m
Mimulus guttatus
mgf006429m
I
0.707
Pm028642
Prunus mume
Pm028642
I
0.707
LBD20
Vitis vinifera
VIT_08s0056g01650
I
0.707
Ciclev10021843m.g
Citrus clementina
Ciclev10021843m.g
I
0.707
Aquca_009_00560
Aquilegia coerulea
Aquca_009_00560
I
0.707