SELMODRAFT_59179 (Selaginella moellendorffii)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 SELMODRAFT_59179 T246023_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
gw1.238.28.1
M02262_2.00
Physcomitrella patens
NNNNNVNGSN

NSCNBNNNNN
PBM
Weirauch et al.(2014)
pTH8459
0.737 0.737
LBD4
M02261_2.00
Arabidopsis thaliana
VDNVCGSNNN

NNNSCGBNHB
PBM
Weirauch et al.(2014)
pTH7515
0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ21127 LOB 4 102

Links

Other LOB family TFs
Other Selaginella moellendorffii TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30169.m006340 Ricinus communis 30169.m006340 I 0.727
Aquca_118_00035 Aquilegia coerulea Aquca_118_00035 I 0.727
LBD4 Arabidopsis thaliana AT1G31320 D 0.707
Bostr.15697s0446 Boechera stricta Bostr.15697s0446 I 0.707
Bra014907 Brassica rapa Bra014907 I 0.707
Cagra.1508s0061 Capsella grandiflora Cagra.1508s0061 I 0.707
Carubv10010462m.g Capsella rubella Carubv10010462m.g I 0.707
cassava20471.m1 Manihot esculenta cassava20471.m1 I 0.727
cassava26200.m1 Manihot esculenta cassava26200.m1 I 0.717
cassava27818.m1 Manihot esculenta cassava27818.m1 I 0.727
cassava30732.valid.m1 Manihot esculenta cassava30732.valid.m1 I 0.727
Ca_06548 Cicer arietinum Ca_06548 I 0.707
Ca_12450 Cicer arietinum Ca_12450 I 0.727
Ca_13575 Cicer arietinum Ca_13575 I 0.707
chr3.CM0176.110.nc Lotus japonicus chr3.CM0176.110.nc I 0.717
chr4.CM0229.130.nc Lotus japonicus chr4.CM0229.130.nc I 0.717
Ciclev10006113m.g Citrus clementina Ciclev10006113m.g I 0.727
Ciclev10016993m.g Citrus clementina Ciclev10016993m.g I 0.727
Ciclev10029962m.g Citrus clementina Ciclev10029962m.g I 0.727
Cla009336 Citrullus lanatus Cla009336 I 0.717
Cla013678 Citrullus lanatus Cla013678 I 0.717
Cucsa.118370 Cucumis sativus Cucsa.118370 I 0.717
Cucsa.236600 Cucumis sativus Cucsa.236600 I 0.707
Eucgr.E02016 Eucalyptus grandis Eucgr.E02016 I 0.707
Eucgr.F04424 Eucalyptus grandis Eucgr.F04424 I 0.707
evm.TU.supercontig_19.133 Carica papaya evm.TU.supercontig_19.133 I 0.707
evm.TU.supercontig_192.6 Carica papaya evm.TU.supercontig_192.6 I 0.707
evm.TU.supercontig_2.374 Carica papaya evm.TU.supercontig_2.374 I 0.707
LBD4 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002773 I 0.707
gene20083-v1.0-hybrid Fragaria vesca gene20083-v1.0-hybrid I 0.727
gene30046-v1.0-hybrid Fragaria vesca gene30046-v1.0-hybrid I 0.717
GLYMA02G43030 Glycine max GLYMA02G43030 I 0.717
GLYMA07G35000 Glycine max GLYMA07G35000 I 0.707
GLYMA08G17990 Glycine max GLYMA08G17990 I 0.727
GLYMA09G02510 Glycine max GLYMA09G02510 I 0.717
GLYMA14G06140 Glycine max GLYMA14G06140 I 0.717
GLYMA15G13410 Glycine max GLYMA15G13410 I 0.717
GLYMA20G02850 Glycine max GLYMA20G02850 I 0.717
Gorai.002G104500 Gossypium raimondii Gorai.002G104500 I 0.737
Gorai.003G149600 Gossypium raimondii Gorai.003G149600 I 0.707
Gorai.009G149900 Gossypium raimondii Gorai.009G149900 I 0.737
Gorai.010G170700 Gossypium raimondii Gorai.010G170700 I 0.737
Gorai.011G051200 Gossypium raimondii Gorai.011G051200 I 0.727
GSMUA_Achr10G13050_001 Musa acuminata GSMUA_Achr10G13050_001 I 0.707
GSMUA_Achr10G14880_001 Musa acuminata GSMUA_Achr10G14880_001 I 0.707
GSMUA_Achr6G15660_001 Musa acuminata GSMUA_Achr6G15660_001 I 0.707
GSMUA_Achr9G18030_001 Musa acuminata GSMUA_Achr9G18030_001 I 0.717
gw1.156.75.1 Physcomitrella patens gw1.156.75.1 I 0.707
gw1.238.28.1 Physcomitrella patens gw1.238.28.1 D 0.737
gw1.66.118.1 Physcomitrella patens gw1.66.118.1 I 0.737
Lus10018275.g Linum usitatissimum Lus10018275.g I 0.707
Lus10031191.g Linum usitatissimum Lus10031191.g I 0.717
Lus10031769.g Linum usitatissimum Lus10031769.g I 0.717
Lus10040638.g Linum usitatissimum Lus10040638.g I 0.717
MDP0000121203 Malus domestica MDP0000121203 I 0.727
MDP0000268890 Malus domestica MDP0000268890 I 0.727
MDP0000284409 Malus domestica MDP0000284409 I 0.727
mgf019461m Mimulus guttatus mgf019461m I 0.707
MTR_5g083230 Medicago truncatula MTR_5g083230 I 0.727
orange1.1g031034m.g Citrus sinensis orange1.1g031034m.g I 0.727
orange1.1g044340m.g Citrus sinensis orange1.1g044340m.g I 0.727
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I 0.707
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I 0.707
Pavir.J06256 Panicum virgatum Pavir.J06256 I 0.717
Pavir.J13923 Panicum virgatum Pavir.J13923 I 0.717
Pavir.J18260 Panicum virgatum Pavir.J18260 I 0.717
PDK_20s1810211g001 Phoenix dactylifera PDK_20s1810211g001 I 0.707
PGSC0003DMG400008649 Solanum tuberosum PGSC0003DMG400008649 I 0.717
PGSC0003DMG400021204 Solanum tuberosum PGSC0003DMG400021204 I 0.737
PK11564.1 Cannabis sativa PK11564.1 I 0.727
PK24688.1 Cannabis sativa PK24688.1 I 0.737
Pm011040 Prunus mume Pm011040 I 0.727
POPTR_0001s11610 Populus trichocarpa POPTR_0001s11610 I 0.737
POPTR_0003s14880 Populus trichocarpa POPTR_0003s14880 I 0.737
POPTR_0007s08290 Populus trichocarpa POPTR_0007s08290 I 0.707
POPTR_0008s07280 Populus trichocarpa POPTR_0008s07280 I 0.707
PRUPE_ppa012253mg Prunus persica PRUPE_ppa012253mg I 0.727
PRUPE_ppa012322mg Prunus persica PRUPE_ppa012322mg I 0.727
SapurV1A.0059s0540 Salix purpurea SapurV1A.0059s0540 I 0.737
SapurV1A.0061s0670 Salix purpurea SapurV1A.0061s0670 I 0.727
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.737
SapurV1A.0094s0480 Salix purpurea SapurV1A.0094s0480 I 0.737
SapurV1A.0284s0080 Salix purpurea SapurV1A.0284s0080 I 0.717
SapurV1A.0673s0190 Salix purpurea SapurV1A.0673s0190 I 0.707
Sb01g012810 Sorghum bicolor Sb01g012810 I 0.707
SELMODRAFT_48883 Selaginella moellendorffii SELMODRAFT_48883 I 0.707
SELMODRAFT_48892 Selaginella moellendorffii SELMODRAFT_48892 I 1.000
SELMODRAFT_49084 Selaginella moellendorffii SELMODRAFT_49084 I 0.717
SELMODRAFT_49085 Selaginella moellendorffii SELMODRAFT_49085 I 0.717
SELMODRAFT_58936 Selaginella moellendorffii SELMODRAFT_58936 I 0.707
Si026864m.g Setaria italica Si026864m.g I 0.727
Si037583m.g Setaria italica Si037583m.g I 0.707
Solyc02g069440.2 Solanum lycopersicum Solyc02g069440.2 I 0.717
Solyc11g045530.1 Solanum lycopersicum Solyc11g045530.1 I 0.717
TCM_029315 Theobroma cacao TCM_029315 I 0.737
TCM_032557 Theobroma cacao TCM_032557 I 0.727
TCM_042447 Theobroma cacao TCM_042447 I 0.707
Thhalv10008917m.g Eutrema salsugineum Thhalv10008917m.g I 0.707
LBD4 Vitis vinifera VIT_00s0125g00290 I 0.747
ASL5 Vitis vinifera VIT_06s0004g07200 I 0.707
LBD3 Vitis vinifera VIT_19s0027g01120 I 0.707