Si024430m.g (Setaria italica)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 Si024430m.g T246052_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Si024430m LOB 36 134

Links

Other LOB family TFs
Other Setaria italica TFs

183 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J04684 Panicum virgatum Pavir.J04684 I 0.980
Pavir.Ca00718 Panicum virgatum Pavir.Ca00718 I 0.980
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.960
OB05G11740 Oryza brachyantha OB05G11740 I 0.949
GRMZM2G165805 Zea mays GRMZM2G165805 N 0.949
ORGLA05G0016500 Oryza glaberrima ORGLA05G0016500 N 0.949
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.939
MLOC_68570 Hordeum vulgare MLOC_68570 N 0.919
Traes_1AS_26CB95294 Triticum aestivum Traes_1AS_26CB95294 N 0.919
Traes_1BS_CE38938A8 Triticum aestivum Traes_1BS_CE38938A8 N 0.919
Traes_1DS_A31FB6CB2 Triticum aestivum Traes_1DS_A31FB6CB2 N 0.919
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.909
OPUNC05G01610 Oryza punctata OPUNC05G01610 N 0.902
OBART05G01640 Oryza barthii OBART05G01640 N 0.885
30111.m000703 Ricinus communis 30111.m000703 I 0.859
GSMUA_Achr10G22970_001 Musa acuminata GSMUA_Achr10G22970_001 I 0.859
Pm000938 Prunus mume Pm000938 I 0.859
GSMUA_Achr7G15500_001 Musa acuminata GSMUA_Achr7G15500_001 I 0.859
TCM_041094 Theobroma cacao TCM_041094 I 0.859
GRMZM2G145568 Zea mays GRMZM2G145568 N 0.859
Eucgr.B02465 Eucalyptus grandis Eucgr.B02465 I 0.848
GSMUA_Achr8G09700_001 Musa acuminata GSMUA_Achr8G09700_001 N 0.848
Cla000556 Citrullus lanatus Cla000556 I 0.848
Sb01g038650 Sorghum bicolor Sb01g038650 N 0.848
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.848
MDP0000151784 Malus domestica MDP0000151784 I 0.848
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.848
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I 0.848
MDP0000123013 Malus domestica MDP0000123013 I 0.848
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.848
Si037280m.g Setaria italica Si037280m.g N 0.848
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I 0.848
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.848
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.848
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.848
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I 0.848
TCM_043081 Theobroma cacao TCM_043081 I 0.848
Pavir.Ia03612 Panicum virgatum Pavir.Ia03612 N 0.848
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.848
GRMZM2G021095 Zea mays GRMZM2G021095 N 0.848
OPUNC05G01600 Oryza punctata OPUNC05G01600 N 0.847
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.838
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.838
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.838
MDP0000218986 Malus domestica MDP0000218986 I 0.838
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.838
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.838
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.838
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.838
gene25294-v1.0-hybrid Fragaria vesca gene25294-v1.0-hybrid I 0.838
Ca_14605 Cicer arietinum Ca_14605 I 0.838
PK27389.1 Cannabis sativa PK27389.1 I 0.838
MDP0000318244 Malus domestica MDP0000318244 I 0.838
Gorai.001G129700 Gossypium raimondii Gorai.001G129700 I 0.838
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.838
MDP0000319331 Malus domestica MDP0000319331 I 0.838
CM1887.100.nc Lotus japonicus CM1887.100.nc I 0.828
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.828
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.828
OB03G23270 Oryza brachyantha OB03G23270 N 0.828
GLYMA13G40370 Glycine max GLYMA13G40370 I 0.828
PK23777.1 Cannabis sativa PK23777.1 I 0.828
MTR_2g093310 Medicago truncatula MTR_2g093310 I 0.828
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.828
Eucgr.J01123 Eucalyptus grandis Eucgr.J01123 I 0.828
GLYMA20G31780 Glycine max GLYMA20G31780 I 0.828
evm.TU.supercontig_53.26 Carica papaya evm.TU.supercontig_53.26 N 0.828
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.828
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.828
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.828
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I 0.828
ONIVA05G01850 Oryza nivara ONIVA05G01850 I 0.828
mgf015666m Mimulus guttatus mgf015666m N 0.828
BGIOSGA038947 Oryza indica BGIOSGA038947 N 0.818
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.818
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.818
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.818
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.818
Ca_04287 Cicer arietinum Ca_04287 I 0.818
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.818
BGIOSGA010952 Oryza indica BGIOSGA010952 N 0.818
Pm018585 Prunus mume Pm018585 I 0.818
ONIVA03G14510 Oryza nivara ONIVA03G14510 N 0.818
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.818
OS03G0287400 Oryza sativa OS03G0287400 N 0.818
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.818
ORGLA03G0128100 Oryza glaberrima ORGLA03G0128100 N 0.818
ORUFI03G13900 Oryza rufipogon ORUFI03G13900 N 0.818
OMERI03G12370 Oryza meridionalis OMERI03G12370 N 0.818
OGLUM03G13350 Oryza glumaepatula OGLUM03G13350 N 0.818
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.818
OPUNC03G12790 Oryza punctata OPUNC03G12790 N 0.818
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.818
OBART03G13260 Oryza barthii OBART03G13260 N 0.818
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.818
Cla020379 Citrullus lanatus Cla020379 I 0.808
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.808
Solyc11g072470.1 Solanum lycopersicum Solyc11g072470.1 I 0.808
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.808
F775_02335 Aegilops tauschii F775_02335 N 0.808
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.808
MDP0000879799 Malus domestica MDP0000879799 N 0.798
Cla005134 Citrullus lanatus Cla005134 N 0.798
AMTR_s00080p00153120 Amborella trichopoda AMTR_s00080p00153120 N 0.798
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.798
Traes_4BL_97EDABD02 Triticum aestivum Traes_4BL_97EDABD02 N 0.798
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.798
Bo5g008590 Brassica oleracea Bo5g008590 N 0.798
Bra018675 Brassica rapa Bra018675 N 0.798
BRADI1G65760 Brachypodium distachyon BRADI1G65760 N 0.798
Gorai.012G185900 Gossypium raimondii Gorai.012G185900 N 0.792
Cagra.1671s0410 Capsella grandiflora Cagra.1671s0410 N 0.788
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.788
mgf022524m Mimulus guttatus mgf022524m N 0.788
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I 0.788
LPERR03G11720 Leersia perrieri LPERR03G11720 N 0.788
MDP0000822986 Malus domestica MDP0000822986 I 0.788
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.788
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.788
Traes_4AS_669BAF6C7 Triticum aestivum Traes_4AS_669BAF6C7 N 0.788
Cucsa.207400 Cucumis sativus Cucsa.207400 N 0.778
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N 0.778
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.778
Bostr.25219s0157 Boechera stricta Bostr.25219s0157 N 0.778
Cla005133 Citrullus lanatus Cla005133 N 0.778
VIT_13s0019g03750 Vitis vinifera VIT_13s0019g03750 N 0.778
LBD11 Arabidopsis thaliana AT2G28500 N 0.768
Ca_02507 Cicer arietinum Ca_02507 N 0.768
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.768
Bo8g112780 Brassica oleracea Bo8g112780 N 0.768
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N 0.768
Solyc06g075330.1 Solanum lycopersicum Solyc06g075330.1 N 0.761
GSMUA_Achr4G16790_001 Musa acuminata GSMUA_Achr4G16790_001 N 0.758
GSMUA_Achr3G17800_001 Musa acuminata GSMUA_Achr3G17800_001 N 0.758
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N 0.758
Bra011942 Brassica rapa Bra011942 N 0.758
Bra031599 Brassica rapa Bra031599 N 0.758
Bo01039s010 Brassica oleracea Bo01039s010 N 0.758
Cagra.9128s0007 Capsella grandiflora Cagra.9128s0007 N 0.758
Carubv10023989m.g Capsella rubella Carubv10023989m.g N 0.758
mgf019622m Mimulus guttatus mgf019622m N 0.758
Bra035698 Brassica rapa Bra035698 N 0.747
Ciclev10032772m.g Citrus clementina Ciclev10032772m.g I 0.747
VIT_13s0019g03720 Vitis vinifera VIT_13s0019g03720 N 0.747
Bo3g040220 Brassica oleracea Bo3g040220 N 0.747
Cucsa.207390 Cucumis sativus Cucsa.207390 N 0.747
Bra000491 Brassica rapa Bra000491 N 0.747
orange1.1g045080m.g Citrus sinensis orange1.1g045080m.g I 0.747
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.747
Bo4g165420 Brassica oleracea Bo4g165420 N 0.747
VIT_13s0019g03830 Vitis vinifera VIT_13s0019g03830 N 0.737
VIT_13s0019g03710 Vitis vinifera VIT_13s0019g03710 N 0.737
PGSC0003DMG400004138 Solanum tuberosum PGSC0003DMG400004138 N 0.737
VIT_13s0019g03810 Vitis vinifera VIT_13s0019g03810 N 0.737
OPUNC03G25820 Oryza punctata OPUNC03G25820 I 0.727
VIT_13s0019g03760 Vitis vinifera VIT_13s0019g03760 N 0.727
cassava16668.m1 Manihot esculenta cassava16668.m1 N 0.723
GRMZM2G447176 Zea mays GRMZM2G447176 I 0.717
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I 0.717
Cucsa.275710 Cucumis sativus Cucsa.275710 N 0.717
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I 0.717
Sb01g012810 Sorghum bicolor Sb01g012810 I 0.717
GRMZM2G079185 Zea mays GRMZM2G079185 I 0.717
Si037583m.g Setaria italica Si037583m.g I 0.717
PK11564.1 Cannabis sativa PK11564.1 I 0.707
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.707
Traes_4DS_DA077BB06 Triticum aestivum Traes_4DS_DA077BB06 I 0.707
OGLUM05G01700 Oryza glumaepatula OGLUM05G01700 N 0.707
OMERI03G24920 Oryza meridionalis OMERI03G24920 I 0.707
ONIVA03G29300 Oryza nivara ONIVA03G29300 I 0.707
OGLUM04G05130 Oryza glumaepatula OGLUM04G05130 I 0.707
MLOC_5148 Hordeum vulgare MLOC_5148 I 0.707
BGIOSGA013249 Oryza indica BGIOSGA013249 I 0.707
F775_08326 Aegilops tauschii F775_08326 I 0.707
ORUFI03G29410 Oryza rufipogon ORUFI03G29410 I 0.707
Traes_4BS_E9E0C550B Triticum aestivum Traes_4BS_E9E0C550B I 0.707
Ca_06548 Cicer arietinum Ca_06548 I 0.707
cassava20471.m1 Manihot esculenta cassava20471.m1 I 0.707
VIT_13s0019g03820 Vitis vinifera VIT_13s0019g03820 N 0.707
TRIUR3_11841 Triticum urartu TRIUR3_11841 I 0.707
Traes_5BL_CE4CF3B5C Triticum aestivum Traes_5BL_CE4CF3B5C I 0.707
TRIUR3_11082 Triticum urartu TRIUR3_11082 I 0.707
Lus10031191.g Linum usitatissimum Lus10031191.g I 0.707