Si037280m.g (Setaria italica)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 Si037280m.g T246060_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Si037280m LOB 59 157

Links

Other LOB family TFs
Other Setaria italica TFs

152 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G145568 Zea mays GRMZM2G145568 N 0.980
GRMZM2G021095 Zea mays GRMZM2G021095 N 0.970
Pavir.Ia03612 Panicum virgatum Pavir.Ia03612 N 0.970
Sb01g038650 Sorghum bicolor Sb01g038650 N 0.970
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.960
OB03G23270 Oryza brachyantha OB03G23270 N 0.939
F775_02335 Aegilops tauschii F775_02335 N 0.929
OMERI03G12370 Oryza meridionalis OMERI03G12370 N 0.919
OGLUM03G13350 Oryza glumaepatula OGLUM03G13350 N 0.919
ONIVA03G14510 Oryza nivara ONIVA03G14510 N 0.919
OBART03G13260 Oryza barthii OBART03G13260 N 0.919
ORUFI03G13900 Oryza rufipogon ORUFI03G13900 N 0.919
BGIOSGA038947 Oryza indica BGIOSGA038947 N 0.919
BGIOSGA010952 Oryza indica BGIOSGA010952 N 0.919
Traes_4BL_97EDABD02 Triticum aestivum Traes_4BL_97EDABD02 N 0.919
OS03G0287400 Oryza sativa OS03G0287400 N 0.919
ORGLA03G0128100 Oryza glaberrima ORGLA03G0128100 N 0.919
OPUNC03G12790 Oryza punctata OPUNC03G12790 N 0.919
Traes_4AS_669BAF6C7 Triticum aestivum Traes_4AS_669BAF6C7 N 0.909
BRADI1G65760 Brachypodium distachyon BRADI1G65760 N 0.889
LPERR03G11720 Leersia perrieri LPERR03G11720 N 0.879
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.859
GRMZM2G165805 Zea mays GRMZM2G165805 N 0.848
Pm000938 Prunus mume Pm000938 I 0.848
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.848
Si024430m.g Setaria italica Si024430m.g N 0.848
OPUNC05G01610 Oryza punctata OPUNC05G01610 N 0.843
GSMUA_Achr8G09700_001 Musa acuminata GSMUA_Achr8G09700_001 N 0.838
Eucgr.B02465 Eucalyptus grandis Eucgr.B02465 I 0.838
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.838
OB05G11740 Oryza brachyantha OB05G11740 I 0.838
30111.m000703 Ricinus communis 30111.m000703 I 0.838
GSMUA_Achr10G22970_001 Musa acuminata GSMUA_Achr10G22970_001 I 0.838
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.838
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.838
TCM_041094 Theobroma cacao TCM_041094 I 0.838
MDP0000318244 Malus domestica MDP0000318244 I 0.838
ORGLA05G0016500 Oryza glaberrima ORGLA05G0016500 N 0.838
MDP0000218986 Malus domestica MDP0000218986 I 0.838
Traes_1AS_26CB95294 Triticum aestivum Traes_1AS_26CB95294 N 0.828
Traes_1BS_CE38938A8 Triticum aestivum Traes_1BS_CE38938A8 N 0.828
Traes_1DS_A31FB6CB2 Triticum aestivum Traes_1DS_A31FB6CB2 N 0.828
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I 0.828
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I 0.828
MDP0000319331 Malus domestica MDP0000319331 I 0.828
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I 0.828
GLYMA13G40370 Glycine max GLYMA13G40370 I 0.828
Pavir.Ca00718 Panicum virgatum Pavir.Ca00718 I 0.828
PK27389.1 Cannabis sativa PK27389.1 I 0.828
Pavir.J04684 Panicum virgatum Pavir.J04684 I 0.828
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.828
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.828
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.828
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.828
MLOC_68570 Hordeum vulgare MLOC_68570 N 0.828
TRIUR3_27720 Triticum urartu TRIUR3_27720 N 0.821
gene25294-v1.0-hybrid Fragaria vesca gene25294-v1.0-hybrid I 0.818
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.818
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.818
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.818
Ca_14605 Cicer arietinum Ca_14605 I 0.818
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.818
GSMUA_Achr7G15500_001 Musa acuminata GSMUA_Achr7G15500_001 I 0.818
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.808
MTR_2g093310 Medicago truncatula MTR_2g093310 I 0.808
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.808
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I 0.808
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.808
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.808
mgf015666m Mimulus guttatus mgf015666m N 0.808
Gorai.001G129700 Gossypium raimondii Gorai.001G129700 I 0.808
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.808
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.798
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.798
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.798
evm.TU.supercontig_53.26 Carica papaya evm.TU.supercontig_53.26 N 0.798
Cla000556 Citrullus lanatus Cla000556 I 0.798
Cagra.1671s0410 Capsella grandiflora Cagra.1671s0410 N 0.798
PK23777.1 Cannabis sativa PK23777.1 I 0.798
Pm018585 Prunus mume Pm018585 I 0.798
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.798
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.798
MDP0000151784 Malus domestica MDP0000151784 I 0.798
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.798
MDP0000123013 Malus domestica MDP0000123013 I 0.798
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.798
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.798
Solyc11g072470.1 Solanum lycopersicum Solyc11g072470.1 I 0.798
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.798
CM1887.100.nc Lotus japonicus CM1887.100.nc I 0.788
Eucgr.J01123 Eucalyptus grandis Eucgr.J01123 I 0.788
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.788
GLYMA20G31780 Glycine max GLYMA20G31780 I 0.788
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.788
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.788
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.788
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.788
Bostr.25219s0157 Boechera stricta Bostr.25219s0157 N 0.788
Ca_04287 Cicer arietinum Ca_04287 I 0.788
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.788
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.788
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.788
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I 0.788
Bo5g008590 Brassica oleracea Bo5g008590 N 0.788
Cla005134 Citrullus lanatus Cla005134 N 0.788
Bra018675 Brassica rapa Bra018675 N 0.788
Ca_02507 Cicer arietinum Ca_02507 N 0.778
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.778
MDP0000822986 Malus domestica MDP0000822986 I 0.778
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.778
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N 0.778
TCM_043081 Theobroma cacao TCM_043081 I 0.778
mgf022524m Mimulus guttatus mgf022524m N 0.778
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.778
Cla020379 Citrullus lanatus Cla020379 I 0.778
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.778
AMTR_s00080p00153120 Amborella trichopoda AMTR_s00080p00153120 N 0.778
LBD11 Arabidopsis thaliana AT2G28500 N 0.778
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.778
GSMUA_Achr3G17800_001 Musa acuminata GSMUA_Achr3G17800_001 N 0.768
Bra011942 Brassica rapa Bra011942 N 0.768
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N 0.768
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N 0.768
Bo01039s010 Brassica oleracea Bo01039s010 N 0.768
MDP0000879799 Malus domestica MDP0000879799 N 0.768
cassava16668.m1 Manihot esculenta cassava16668.m1 N 0.766
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.758
Cucsa.207400 Cucumis sativus Cucsa.207400 N 0.758
Carubv10023989m.g Capsella rubella Carubv10023989m.g N 0.758
Bra035698 Brassica rapa Bra035698 N 0.758
Cagra.9128s0007 Capsella grandiflora Cagra.9128s0007 N 0.758
GSMUA_Achr4G16790_001 Musa acuminata GSMUA_Achr4G16790_001 N 0.758
Bo4g165420 Brassica oleracea Bo4g165420 N 0.758
Bo8g112780 Brassica oleracea Bo8g112780 N 0.758
Solyc06g075330.1 Solanum lycopersicum Solyc06g075330.1 N 0.750
Bra031599 Brassica rapa Bra031599 N 0.747
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.747
Bo3g040220 Brassica oleracea Bo3g040220 N 0.747
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.747
Bra000491 Brassica rapa Bra000491 N 0.747
Cla005133 Citrullus lanatus Cla005133 N 0.737
VIT_13s0019g03750 Vitis vinifera VIT_13s0019g03750 N 0.737
Cucsa.207390 Cucumis sativus Cucsa.207390 N 0.727
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.717
ONIVA05G01850 Oryza nivara ONIVA05G01850 I 0.717
mgf019622m Mimulus guttatus mgf019622m N 0.717
Ciclev10032772m.g Citrus clementina Ciclev10032772m.g I 0.707
VIT_13s0019g03720 Vitis vinifera VIT_13s0019g03720 N 0.707
GRMZM2G447176 Zea mays GRMZM2G447176 I 0.707
orange1.1g045080m.g Citrus sinensis orange1.1g045080m.g I 0.707
BRADI4G44850 Brachypodium distachyon BRADI4G44850 I 0.707
PGSC0003DMG400004138 Solanum tuberosum PGSC0003DMG400004138 N 0.707