Solyc11g072470.1 (Solanum lycopersicum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 Solyc11g072470.1 T246111_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LBD4
M02261_2.00
Arabidopsis thaliana
VDNVCGSNNN

NNNSCGBNHB
PBM
Weirauch et al.(2014)
pTH7515
0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc11g072470.1.1 LOB 36 134

Links

Other LOB family TFs
Other Solanum lycopersicum TFs

281 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.949
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.939
GLYMA20G31780 Glycine max GLYMA20G31780 I 0.929
CM1887.100.nc Lotus japonicus CM1887.100.nc I 0.929
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.919
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.919
mgf015666m Mimulus guttatus mgf015666m N 0.919
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.909
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.909
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.909
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.909
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I 0.909
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.909
gene25294-v1.0-hybrid Fragaria vesca gene25294-v1.0-hybrid I 0.909
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I 0.909
Ca_04287 Cicer arietinum Ca_04287 I 0.909
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.899
PK23777.1 Cannabis sativa PK23777.1 I 0.899
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.899
30111.m000703 Ricinus communis 30111.m000703 I 0.899
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.899
GLYMA13G40370 Glycine max GLYMA13G40370 I 0.899
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.899
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.899
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.899
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.899
PK27389.1 Cannabis sativa PK27389.1 I 0.899
TCM_041094 Theobroma cacao TCM_041094 I 0.899
Gorai.001G129700 Gossypium raimondii Gorai.001G129700 I 0.899
Cla020379 Citrullus lanatus Cla020379 I 0.899
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.899
TCM_043081 Theobroma cacao TCM_043081 I 0.899
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.899
MTR_2g093310 Medicago truncatula MTR_2g093310 I 0.889
Eucgr.B02465 Eucalyptus grandis Eucgr.B02465 I 0.889
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.889
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.889
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.889
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.889
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I 0.889
MDP0000319331 Malus domestica MDP0000319331 I 0.889
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.889
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.889
GSMUA_Achr10G22970_001 Musa acuminata GSMUA_Achr10G22970_001 I 0.879
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.879
Eucgr.J01123 Eucalyptus grandis Eucgr.J01123 I 0.879
Pm000938 Prunus mume Pm000938 I 0.879
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.879
GSMUA_Achr7G15500_001 Musa acuminata GSMUA_Achr7G15500_001 I 0.879
Pm018585 Prunus mume Pm018585 I 0.879
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.879
Ca_14605 Cicer arietinum Ca_14605 I 0.879
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.879
MDP0000151784 Malus domestica MDP0000151784 I 0.869
Cla000556 Citrullus lanatus Cla000556 I 0.869
MDP0000318244 Malus domestica MDP0000318244 I 0.869
MDP0000218986 Malus domestica MDP0000218986 I 0.869
Bra011942 Brassica rapa Bra011942 N 0.869
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.869
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.869
Bostr.25219s0157 Boechera stricta Bostr.25219s0157 N 0.869
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.869
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.869
MDP0000123013 Malus domestica MDP0000123013 I 0.869
AMTR_s00080p00153120 Amborella trichopoda AMTR_s00080p00153120 N 0.869
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N 0.859
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N 0.859
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.859
MDP0000822986 Malus domestica MDP0000822986 I 0.859
Carubv10023989m.g Capsella rubella Carubv10023989m.g N 0.859
Cagra.1671s0410 Capsella grandiflora Cagra.1671s0410 N 0.859
evm.TU.supercontig_53.26 Carica papaya evm.TU.supercontig_53.26 N 0.859
OB05G11740 Oryza brachyantha OB05G11740 I 0.859
Cagra.9128s0007 Capsella grandiflora Cagra.9128s0007 N 0.859
Bo01039s010 Brassica oleracea Bo01039s010 N 0.859
Bra035698 Brassica rapa Bra035698 N 0.848
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.848
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N 0.848
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.848
MDP0000879799 Malus domestica MDP0000879799 N 0.848
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.848
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.848
ORGLA05G0016500 Oryza glaberrima ORGLA05G0016500 N 0.848
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.848
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I 0.848
Bo4g165420 Brassica oleracea Bo4g165420 N 0.848
LBD11 Arabidopsis thaliana AT2G28500 N 0.848
PGSC0003DMG400025384 Solanum tuberosum PGSC0003DMG400025384 N 0.848
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.848
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.848
Cla005134 Citrullus lanatus Cla005134 N 0.848
Ca_02507 Cicer arietinum Ca_02507 N 0.838
mgf022524m Mimulus guttatus mgf022524m N 0.838
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.838
Pavir.J04684 Panicum virgatum Pavir.J04684 I 0.828
Pavir.Ca00718 Panicum virgatum Pavir.Ca00718 I 0.828
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I 0.828
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.828
Bo3g040220 Brassica oleracea Bo3g040220 N 0.828
Bra000491 Brassica rapa Bra000491 N 0.828
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.818
MLOC_68570 Hordeum vulgare MLOC_68570 N 0.818
Traes_1DS_A31FB6CB2 Triticum aestivum Traes_1DS_A31FB6CB2 N 0.818
GSMUA_Achr8G09700_001 Musa acuminata GSMUA_Achr8G09700_001 N 0.818
GRMZM2G021095 Zea mays GRMZM2G021095 N 0.818
Bra018675 Brassica rapa Bra018675 N 0.818
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.818
Traes_1BS_CE38938A8 Triticum aestivum Traes_1BS_CE38938A8 N 0.818
Traes_1AS_26CB95294 Triticum aestivum Traes_1AS_26CB95294 N 0.818
Sb01g038650 Sorghum bicolor Sb01g038650 N 0.818
Bo5g008590 Brassica oleracea Bo5g008590 N 0.818
Pavir.Ia03612 Panicum virgatum Pavir.Ia03612 N 0.818
PGSC0003DMG400004138 Solanum tuberosum PGSC0003DMG400004138 N 0.818
cassava16668.m1 Manihot esculenta cassava16668.m1 N 0.809
OPUNC03G12790 Oryza punctata OPUNC03G12790 N 0.808
Cucsa.207400 Cucumis sativus Cucsa.207400 N 0.808
OBART03G13260 Oryza barthii OBART03G13260 N 0.808
GRMZM2G165805 Zea mays GRMZM2G165805 N 0.808
GRMZM2G145568 Zea mays GRMZM2G145568 N 0.808
BGIOSGA038947 Oryza indica BGIOSGA038947 N 0.808
mgf019622m Mimulus guttatus mgf019622m N 0.808
OGLUM03G13350 Oryza glumaepatula OGLUM03G13350 N 0.808
OMERI03G12370 Oryza meridionalis OMERI03G12370 N 0.808
OS03G0287400 Oryza sativa OS03G0287400 N 0.808
BGIOSGA010952 Oryza indica BGIOSGA010952 N 0.808
Si024430m.g Setaria italica Si024430m.g N 0.808
ORUFI03G13900 Oryza rufipogon ORUFI03G13900 N 0.808
ORGLA03G0128100 Oryza glaberrima ORGLA03G0128100 N 0.808
ONIVA03G14510 Oryza nivara ONIVA03G14510 N 0.808
Cla005133 Citrullus lanatus Cla005133 N 0.798
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.798
Si037280m.g Setaria italica Si037280m.g N 0.798
BRADI1G65760 Brachypodium distachyon BRADI1G65760 N 0.798
Bo8g112780 Brassica oleracea Bo8g112780 N 0.798
VIT_13s0019g03750 Vitis vinifera VIT_13s0019g03750 N 0.788
Ciclev10032772m.g Citrus clementina Ciclev10032772m.g I 0.788
OB03G23270 Oryza brachyantha OB03G23270 N 0.788
Bra031599 Brassica rapa Bra031599 N 0.788
orange1.1g045080m.g Citrus sinensis orange1.1g045080m.g I 0.788
GSMUA_Achr3G17800_001 Musa acuminata GSMUA_Achr3G17800_001 N 0.778
Traes_4BL_97EDABD02 Triticum aestivum Traes_4BL_97EDABD02 N 0.778
Traes_4AS_669BAF6C7 Triticum aestivum Traes_4AS_669BAF6C7 N 0.778
F775_02335 Aegilops tauschii F775_02335 N 0.778
GSMUA_Achr4G16790_001 Musa acuminata GSMUA_Achr4G16790_001 N 0.778
LPERR03G11720 Leersia perrieri LPERR03G11720 N 0.778
VIT_13s0019g03810 Vitis vinifera VIT_13s0019g03810 N 0.758
Cucsa.207390 Cucumis sativus Cucsa.207390 N 0.758
POPTR_0005s10050 Populus trichocarpa POPTR_0005s10050 I 0.750
ONIVA05G01850 Oryza nivara ONIVA05G01850 I 0.747
Solyc06g075330.1 Solanum lycopersicum Solyc06g075330.1 N 0.747
VIT_13s0019g03710 Vitis vinifera VIT_13s0019g03710 N 0.747
TRIUR3_11082 Triticum urartu TRIUR3_11082 I 0.747
Cucsa.275710 Cucumis sativus Cucsa.275710 N 0.747
MLOC_5148 Hordeum vulgare MLOC_5148 I 0.747
VIT_13s0019g03760 Vitis vinifera VIT_13s0019g03760 N 0.737
GSMUA_Achr9G04330_001 Musa acuminata GSMUA_Achr9G04330_001 N 0.737
PGSC0003DMG400030456 Solanum tuberosum PGSC0003DMG400030456 I 0.737
VIT_13s0019g03720 Vitis vinifera VIT_13s0019g03720 N 0.737
Traes_5BL_CE4CF3B5C Triticum aestivum Traes_5BL_CE4CF3B5C I 0.737
BRADI4G44850 Brachypodium distachyon BRADI4G44850 I 0.737
mgf018189m Mimulus guttatus mgf018189m I 0.737
Solyc06g082310.2 Solanum lycopersicum Solyc06g082310.2 I 0.737
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.737
F775_08326 Aegilops tauschii F775_08326 I 0.737
SapurV1A.0284s0080 Salix purpurea SapurV1A.0284s0080 I 0.727
Ciclev10029962m.g Citrus clementina Ciclev10029962m.g I 0.727
Ca_13575 Cicer arietinum Ca_13575 I 0.727
orange1.1g044340m.g Citrus sinensis orange1.1g044340m.g I 0.727
Lus10031191.g Linum usitatissimum Lus10031191.g I 0.727
Ciclev10006113m.g Citrus clementina Ciclev10006113m.g I 0.727
PRUPE_ppa012504mg Prunus persica PRUPE_ppa012504mg I 0.727
PK11564.1 Cannabis sativa PK11564.1 I 0.717
SapurV1A.0673s0190 Salix purpurea SapurV1A.0673s0190 I 0.717
Thhalv10008917m.g Eutrema salsugineum Thhalv10008917m.g I 0.717
Ciclev10032929m.g Citrus clementina Ciclev10032929m.g I 0.717
evm.TU.supercontig_192.6 Carica papaya evm.TU.supercontig_192.6 I 0.717
MDP0000268890 Malus domestica MDP0000268890 I 0.717
MDP0000284409 Malus domestica MDP0000284409 I 0.717
gene30046-v1.0-hybrid Fragaria vesca gene30046-v1.0-hybrid I 0.717
Gorai.002G104500 Gossypium raimondii Gorai.002G104500 I 0.717
MDP0000121203 Malus domestica MDP0000121203 I 0.717
Gorai.011G290800 Gossypium raimondii Gorai.011G290800 I 0.717
Gorai.010G195100 Gossypium raimondii Gorai.010G195100 I 0.717
orange1.1g036782m.g Citrus sinensis orange1.1g036782m.g I 0.717
gene20083-v1.0-hybrid Fragaria vesca gene20083-v1.0-hybrid I 0.717
Pavir.J13923 Panicum virgatum Pavir.J13923 I 0.717
Pavir.J18260 Panicum virgatum Pavir.J18260 I 0.717
Eucgr.F04424 Eucalyptus grandis Eucgr.F04424 I 0.717
Eucgr.G03089 Eucalyptus grandis Eucgr.G03089 I 0.717
Pavir.J06256 Panicum virgatum Pavir.J06256 I 0.717
Eucgr.J00175 Eucalyptus grandis Eucgr.J00175 I 0.717
LBD4 Arabidopsis thaliana AT1G31320 D 0.717
Cla013678 Citrullus lanatus Cla013678 I 0.717
Si026864m.g Setaria italica Si026864m.g I 0.717
GLYMA08G17990 Glycine max GLYMA08G17990 I 0.717
POPTR_0008s07280 Populus trichocarpa POPTR_0008s07280 I 0.717
Pm011040 Prunus mume Pm011040 I 0.717
LBD4 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002773 I 0.717
TCM_042447 Theobroma cacao TCM_042447 I 0.717
29729.m002278 Ricinus communis 29729.m002278 I 0.717
Pm018982 Prunus mume Pm018982 I 0.717
PGSC0003DMG400008649 Solanum tuberosum PGSC0003DMG400008649 I 0.717
VIT_13s0067g01880 Vitis vinifera VIT_13s0067g01880 I 0.717
TCM_032557 Theobroma cacao TCM_032557 I 0.717
MTR_2g068760 Medicago truncatula MTR_2g068760 I 0.717
Bo7g041000 Brassica oleracea Bo7g041000 I 0.717
VIT_13s0019g03780 Vitis vinifera VIT_13s0019g03780 N 0.717
VIT_13s0019g03820 Vitis vinifera VIT_13s0019g03820 N 0.717
Solyc11g045530.1 Solanum lycopersicum Solyc11g045530.1 I 0.717
VIT_13s0019g03830 Vitis vinifera VIT_13s0019g03830 N 0.717
30169.m006340 Ricinus communis 30169.m006340 I 0.717
PRUPE_ppa012322mg Prunus persica PRUPE_ppa012322mg I 0.717
Aquca_118_00035 Aquilegia coerulea Aquca_118_00035 I 0.717
Aquca_030_00227 Aquilegia coerulea Aquca_030_00227 I 0.717
mgf026046m Mimulus guttatus mgf026046m I 0.717
Bostr.15697s0446 Boechera stricta Bostr.15697s0446 I 0.717
Cagra.1508s0061 Capsella grandiflora Cagra.1508s0061 I 0.717
Carubv10010462m.g Capsella rubella Carubv10010462m.g I 0.717
POPTR_0007s08290 Populus trichocarpa POPTR_0007s08290 I 0.717
mgf022958m Mimulus guttatus mgf022958m I 0.717
Cucsa.239660 Cucumis sativus Cucsa.239660 I 0.717
cassava27818.m1 Manihot esculenta cassava27818.m1 I 0.717
cassava30732.valid.m1 Manihot esculenta cassava30732.valid.m1 I 0.717
Cucsa.118370 Cucumis sativus Cucsa.118370 I 0.717
cassava26200.m1 Manihot esculenta cassava26200.m1 I 0.717
PRUPE_ppa012253mg Prunus persica PRUPE_ppa012253mg I 0.717
cassava20865.m1 Manihot esculenta cassava20865.m1 I 0.717
POPTR_0001s11610 Populus trichocarpa POPTR_0001s11610 I 0.707
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I 0.707
LBD12 Arabidopsis thaliana AT2G30130 I 0.707
MTR_3g071590 Medicago truncatula MTR_3g071590 I 0.707
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I 0.707
POPTR_0003s14880 Populus trichocarpa POPTR_0003s14880 I 0.707
GLYMA14G06140 Glycine max GLYMA14G06140 I 0.707
PK24688.1 Cannabis sativa PK24688.1 I 0.707
ASL5 Arabidopsis lyrata fgenesh2_kg.4__983__AT2G30130.1 I 0.707
GLYMA02G43030 Glycine max GLYMA02G43030 I 0.707
Bra021612 Brassica rapa Bra021612 I 0.707
Bra018335 Brassica rapa Bra018335 I 0.707
Bra014907 Brassica rapa Bra014907 I 0.707
chr4.CM0229.130.nc Lotus japonicus chr4.CM0229.130.nc I 0.707
GLYMA11G29450 Glycine max GLYMA11G29450 I 0.707
GLYMA18G06530 Glycine max GLYMA18G06530 I 0.707
GRMZM2G447176 Zea mays GRMZM2G447176 I 0.707
GSMUA_Achr10G13050_001 Musa acuminata GSMUA_Achr10G13050_001 I 0.707
GRMZM2G079185 Zea mays GRMZM2G079185 I 0.707
SapurV1A.0059s0540 Salix purpurea SapurV1A.0059s0540 I 0.707
SapurV1A.0094s0480 Salix purpurea SapurV1A.0094s0480 I 0.707
GLYMA20G02850 Glycine max GLYMA20G02850 I 0.707
GSMUA_Achr10G14880_001 Musa acuminata GSMUA_Achr10G14880_001 I 0.707
Lus10040638.g Linum usitatissimum Lus10040638.g I 0.707
Ca_06548 Cicer arietinum Ca_06548 I 0.707
Gorai.003G149600 Gossypium raimondii Gorai.003G149600 I 0.707
Gorai.004G234100 Gossypium raimondii Gorai.004G234100 I 0.707
LBD3 Vitis vinifera VIT_19s0027g01120 I 0.707
VIT_13s0019g03840 Vitis vinifera VIT_13s0019g03840 N 0.707
Gorai.009G149900 Gossypium raimondii Gorai.009G149900 I 0.707
Cla005598 Citrullus lanatus Cla005598 I 0.707
Pm000193 Prunus mume Pm000193 I 0.707
Eucgr.B03991 Eucalyptus grandis Eucgr.B03991 I 0.707
Ciclev10016993m.g Citrus clementina Ciclev10016993m.g I 0.707
evm.TU.supercontig_2.374 Carica papaya evm.TU.supercontig_2.374 I 0.707
cassava20471.m1 Manihot esculenta cassava20471.m1 I 0.707
gene28202-v1.0-hybrid Fragaria vesca gene28202-v1.0-hybrid I 0.707
gene21039-v1.0-hybrid Fragaria vesca gene21039-v1.0-hybrid I 0.707
Gorai.011G051200 Gossypium raimondii Gorai.011G051200 I 0.707
Bo4g059700 Brassica oleracea Bo4g059700 I 0.707
MDP0000265429 Malus domestica MDP0000265429 I 0.707
Si037583m.g Setaria italica Si037583m.g I 0.707
Sb01g012810 Sorghum bicolor Sb01g012810 I 0.707
PRUPE_ppa012275mg Prunus persica PRUPE_ppa012275mg I 0.707
POPTR_0010s19180 Populus trichocarpa POPTR_0010s19180 I 0.707
Bo4g170770 Brassica oleracea Bo4g170770 I 0.707
MDP0000155138 Malus domestica MDP0000155138 I 0.707
TCM_029315 Theobroma cacao TCM_029315 I 0.707
Lus10031285.g Linum usitatissimum Lus10031285.g I 0.707
LBD4 Vitis vinifera VIT_00s0125g00290 I 0.707
Lus10031769.g Linum usitatissimum Lus10031769.g I 0.707
TCM_042212 Theobroma cacao TCM_042212 I 0.707
Carubv10025543m.g Capsella rubella Carubv10025543m.g I 0.707
orange1.1g031034m.g Citrus sinensis orange1.1g031034m.g I 0.707