TCM_007211 (Theobroma cacao)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 TCM_007211 T246122_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOX98450 LOB 51 153

Links

Other LOB family TFs
Other Theobroma cacao TFs

180 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
evm.TU.supercontig_21.100 Carica papaya evm.TU.supercontig_21.100 N 0.714
Bostr.7867s1612 Boechera stricta Bostr.7867s1612 N 0.745
Bostr.6864s0247 Boechera stricta Bostr.6864s0247 N 0.796
Bostr.0568s0168 Boechera stricta Bostr.0568s0168 N 0.765
Aquca_042_00143 Aquilegia coerulea Aquca_042_00143 N 0.796
mgf016064m Mimulus guttatus mgf016064m N 0.776
mgf016023m Mimulus guttatus mgf016023m N 0.794
mgf007319m Mimulus guttatus mgf007319m N 0.735
gw1.41.215.1 Physcomitrella patens gw1.41.215.1 N 0.735
gw1.167.132.1 Physcomitrella patens gw1.167.132.1 N 0.755
Cagra.0342s0030 Capsella grandiflora Cagra.0342s0030 N 0.765
Cagra.10957s0002 Capsella grandiflora Cagra.10957s0002 N 0.786
evm.TU.supercontig_106.63 Carica papaya evm.TU.supercontig_106.63 N 0.867
Eucgr.H02293 Eucalyptus grandis Eucgr.H02293 N 0.806
Eucgr.G01261 Eucalyptus grandis Eucgr.G01261 N 0.765
Ciclev10029274m.g Citrus clementina Ciclev10029274m.g N 0.847
Ciclev10026374m.g Citrus clementina Ciclev10026374m.g N 0.786
Carubv10027507m.g Capsella rubella Carubv10027507m.g N 0.755
Carubv10017944m.g Capsella rubella Carubv10017944m.g N 0.786
Carubv10005616m.g Capsella rubella Carubv10005616m.g N 0.786
Cagra.4491s0014 Capsella grandiflora Cagra.4491s0014 N 0.786
estExt_gwp_gw1.C_2030014 Physcomitrella patens estExt_gwp_gw1.C_2030014 N 0.704
e_gw1.19.226.1 Physcomitrella patens e_gw1.19.226.1 N 0.745
Cucsa.352730 Cucumis sativus Cucsa.352730 N 0.722
Pm002404 Prunus mume Pm002404 N 0.742
Cla020920 Citrullus lanatus Cla020920 N 0.724
Cla014228 Citrullus lanatus Cla014228 N 0.786
Ca_09342 Cicer arietinum Ca_09342 N 0.796
Ca_02208 Cicer arietinum Ca_02208 N 0.796
VIT_18s0001g09250 Vitis vinifera VIT_18s0001g09250 N 0.724
VIT_07s0129g00330 Vitis vinifera VIT_07s0129g00330 N 0.755
VIT_03s0091g00670 Vitis vinifera VIT_03s0091g00670 N 0.796
Traes_4BL_D44ACD58E Triticum aestivum Traes_4BL_D44ACD58E N 0.725
Pm005389 Prunus mume Pm005389 N 0.735
Pm021281 Prunus mume Pm021281 N 0.786
Cucsa.103050 Cucumis sativus Cucsa.103050 N 0.786
cassava9459.m1 Manihot esculenta cassava9459.m1 N 0.825
cassava7497.valid.m1 Manihot esculenta cassava7497.valid.m1 N 0.806
cassava35733.valid.m1 Manihot esculenta cassava35733.valid.m1 N 0.714
cassava226.valid.m1 Manihot esculenta cassava226.valid.m1 N 0.806
cassava22449.valid.m1 Manihot esculenta cassava22449.valid.m1 N 0.724
30170.m013752 Ricinus communis 30170.m013752 N 0.735
29661.m000902 Ricinus communis 29661.m000902 N 0.806
28152.m000905 Ricinus communis 28152.m000905 N 0.835
Traes_2BS_5DF7F4FEE Triticum aestivum Traes_2BS_5DF7F4FEE N 0.714
LjSGA_036652.1 Lotus japonicus LjSGA_036652.1 N 0.759
SapurV1A.2860s0030 Salix purpurea SapurV1A.2860s0030 N 0.714
SapurV1A.0845s0090 Salix purpurea SapurV1A.0845s0090 N 0.714
SapurV1A.0476s0230 Salix purpurea SapurV1A.0476s0230 N 0.717
SapurV1A.0336s0110 Salix purpurea SapurV1A.0336s0110 N 0.786
SapurV1A.0116s0210 Salix purpurea SapurV1A.0116s0210 N 0.796
SapurV1A.0019s0260 Salix purpurea SapurV1A.0019s0260 N 0.806
Pavir.J18418 Panicum virgatum Pavir.J18418 N 0.745
Pavir.Ia03080 Panicum virgatum Pavir.Ia03080 N 0.735
Pavir.Bb01170 Panicum virgatum Pavir.Bb01170 N 0.745
Thhalv10004811m.g Eutrema salsugineum Thhalv10004811m.g N 0.765
Thhalv10010666m.g Eutrema salsugineum Thhalv10010666m.g N 0.796
chr5.CM0200.600.nd Lotus japonicus chr5.CM0200.600.nd N 0.786
chr4.CM0128.270.nc Lotus japonicus chr4.CM0128.270.nc N 0.806
chr1.CM0088.550.nd Lotus japonicus chr1.CM0088.550.nd N 0.755
PK29811.1 Cannabis sativa PK29811.1 N 0.791
PK25954.1 Cannabis sativa PK25954.1 N 0.783
PK15647.1 Cannabis sativa PK15647.1 N 0.815
PK03977.1 Cannabis sativa PK03977.1 N 0.704
PK03075.1 Cannabis sativa PK03075.1 N 0.773
Thhalv10026086m.g Eutrema salsugineum Thhalv10026086m.g N 0.765
Pavir.Ba01055 Panicum virgatum Pavir.Ba01055 N 0.724
orange1.1g029970m.g Citrus sinensis orange1.1g029970m.g N 0.729
orange1.1g026365m.g Citrus sinensis orange1.1g026365m.g N 0.786
Lus10007758.g Linum usitatissimum Lus10007758.g N 0.745
Gorai.009G218800 Gossypium raimondii Gorai.009G218800 N 0.714
Gorai.008G081100 Gossypium raimondii Gorai.008G081100 N 0.776
Gorai.007G222000 Gossypium raimondii Gorai.007G222000 N 0.796
Gorai.007G056300 Gossypium raimondii Gorai.007G056300 N 0.786
Gorai.005G232500 Gossypium raimondii Gorai.005G232500 N 0.932
gene25541-v1.0-hybrid Fragaria vesca gene25541-v1.0-hybrid N 0.776
gene05722-v1.0-hybrid Fragaria vesca gene05722-v1.0-hybrid N 0.796
gene02557-v1.0-hybrid Fragaria vesca gene02557-v1.0-hybrid N 0.704
Lus10011530.g Linum usitatissimum Lus10011530.g N 0.796
Lus10018697.g Linum usitatissimum Lus10018697.g N 0.755
MDP0000794101 Malus domestica MDP0000794101 N 0.745
MDP0000747679 Malus domestica MDP0000747679 N 0.704
MDP0000487015 Malus domestica MDP0000487015 N 0.704
MDP0000261146 Malus domestica MDP0000261146 N 0.735
MDP0000247079 Malus domestica MDP0000247079 N 0.735
MDP0000239820 Malus domestica MDP0000239820 N 0.784
MDP0000151330 Malus domestica MDP0000151330 N 0.784
MDP0000139025 Malus domestica MDP0000139025 N 0.765
Lus10019292.g Linum usitatissimum Lus10019292.g N 0.796
evm.TU.supercontig_6.40 Carica papaya evm.TU.supercontig_6.40 N 0.796
MTR_5g015880 Medicago truncatula MTR_5g015880 N 0.796
GLYMA20G26910 Glycine max GLYMA20G26910 N 0.773
GLYMA17G17540 Glycine max GLYMA17G17540 N 0.796
GLYMA14G09750 Glycine max GLYMA14G09750 N 0.714
GLYMA11G05280 Glycine max GLYMA11G05280 N 0.806
GLYMA10G40421 Glycine max GLYMA10G40421 N 0.755
GLYMA05G22120 Glycine max GLYMA05G22120 N 0.816
GLYMA01G40010 Glycine max GLYMA01G40010 N 0.806
LBD37 Arabidopsis lyrata fgenesh2_kg.8__2670__AT5G67420.1 N 0.765
LBD39 Arabidopsis lyrata fgenesh2_kg.7__297__AT4G37540.1 N 0.765
GRMZM2G044902 Zea mays GRMZM2G044902 N 0.745
GRMZM2G177110 Zea mays GRMZM2G177110 N 0.704
MTR_4g095600 Medicago truncatula MTR_4g095600 N 0.816
MTR_1g106420 Medicago truncatula MTR_1g106420 N 0.755
MLOC_11838 Hordeum vulgare MLOC_11838 N 0.704
LPERR07G17890 Leersia perrieri LPERR07G17890 N 0.768
LPERR03G19360 Leersia perrieri LPERR03G19360 N 0.735
GSMUA_Achr7G26260_001 Musa acuminata GSMUA_Achr7G26260_001 N 0.776
GSMUA_Achr4G14150_001 Musa acuminata GSMUA_Achr4G14150_001 N 0.735
GSMUA_Achr3G30130_001 Musa acuminata GSMUA_Achr3G30130_001 N 0.765
GSMUA_Achr3G18860_001 Musa acuminata GSMUA_Achr3G18860_001 N 0.776
BRADI1G22920 Brachypodium distachyon BRADI1G22920 N 0.724
Bra037847 Brassica rapa Bra037847 N 0.765
Bra036040 Brassica rapa Bra036040 N 0.765
Bo5g132850 Brassica oleracea Bo5g132850 N 0.755
Bo2g168020 Brassica oleracea Bo2g168020 N 0.765
Bo1g003550 Brassica oleracea Bo1g003550 N 0.776
BGIOSGA026049 Oryza indica BGIOSGA026049 N 0.722
BGIOSGA010454 Oryza indica BGIOSGA010454 N 0.745
LBD37 Arabidopsis thaliana AT5G67420 N 0.765
LBD39 Arabidopsis thaliana AT4G37540 N 0.776
LBD38 Arabidopsis thaliana AT3G49940 N 0.796
AMTR_s00137p00087340 Amborella trichopoda AMTR_s00137p00087340 N 0.776
Bo7g063630 Brassica oleracea Bo7g063630 N 0.776
Bo7g099150 Brassica oleracea Bo7g099150 N 0.786
Bra031833 Brassica rapa Bra031833 N 0.776
Bra017831 Brassica rapa Bra017831 N 0.714
Bra012913 Brassica rapa Bra012913 N 0.776
Bra012164 Brassica rapa Bra012164 N 0.776
Bra011772 Brassica rapa Bra011772 N 0.765
Bo9g019150 Brassica oleracea Bo9g019150 N 0.755
Bo9g018500 Brassica oleracea Bo9g018500 N 0.724
Bo8g079200 Brassica oleracea Bo8g079200 N 0.776
Bo7g118580 Brassica oleracea Bo7g118580 N 0.724
AMTR_s00137p00051070 Amborella trichopoda AMTR_s00137p00051070 N 0.745
Traes_2AS_942884399 Triticum aestivum Traes_2AS_942884399 N 0.704
SELMODRAFT_105005 Selaginella moellendorffii SELMODRAFT_105005 N 0.745
LBD38 Arabidopsis lyrata scaffold_502015.1 N 0.786
Sb02g038030 Sorghum bicolor Sb02g038030 N 0.724
Sb01g031790 Sorghum bicolor Sb01g031790 N 0.742
PRUPE_ppa022806mg Prunus persica PRUPE_ppa022806mg N 0.796
PRUPE_ppa014964mg Prunus persica PRUPE_ppa014964mg N 0.735
POPTR_0009s09270 Populus trichocarpa POPTR_0009s09270 N 0.806
POPTR_0007s10010 Populus trichocarpa POPTR_0007s10010 N 0.796
POPTR_0005s18900 Populus trichocarpa POPTR_0005s18900 N 0.816
SELMODRAFT_27399 Selaginella moellendorffii SELMODRAFT_27399 N 0.745
SELMODRAFT_37532 Selaginella moellendorffii SELMODRAFT_37532 N 0.711
TCM_034722 Theobroma cacao TCM_034722 N 0.704
TCM_000766 Theobroma cacao TCM_000766 N 0.806
Solyc04g077990.2 Solanum lycopersicum Solyc04g077990.2 N 0.704
Solyc02g092550.2 Solanum lycopersicum Solyc02g092550.2 N 0.796
Solyc01g107190.2 Solanum lycopersicum Solyc01g107190.2 N 0.827
Si031011m.g Setaria italica Si031011m.g N 0.745
SELMODRAFT_61520 Selaginella moellendorffii SELMODRAFT_61520 N 0.714
SELMODRAFT_37570 Selaginella moellendorffii SELMODRAFT_37570 N 0.742
SELMODRAFT_37566 Selaginella moellendorffii SELMODRAFT_37566 N 0.742
POPTR_0002s12020 Populus trichocarpa POPTR_0002s12020 N 0.704
POPTR_0001s30280 Populus trichocarpa POPTR_0001s30280 N 0.816
PGSC0003DMG400025752 Solanum tuberosum PGSC0003DMG400025752 N 0.837
ONIVA03G24370 Oryza nivara ONIVA03G24370 N 0.745
OMERI07G17270 Oryza meridionalis OMERI07G17270 N 0.722
OMERI03G20600 Oryza meridionalis OMERI03G20600 N 0.745
OLONG_015384 Oryza longistaminata OLONG_015384 N 0.745
OLONG_008015 Oryza longistaminata OLONG_008015 N 0.741
OGLUM07G20380 Oryza glumaepatula OGLUM07G20380 N 0.722
OGLUM03G23580 Oryza glumaepatula OGLUM03G23580 N 0.745
OBART07G20600 Oryza barthii OBART07G20600 N 0.722
OBART03G22820 Oryza barthii OBART03G22820 N 0.745
ONIVA07G19050 Oryza nivara ONIVA07G19050 N 0.722
OPUNC03G21330 Oryza punctata OPUNC03G21330 N 0.745
PGSC0003DMG400024936 Solanum tuberosum PGSC0003DMG400024936 N 0.796
OS07G0589000 Oryza sativa OS07G0589000 N 0.722
OS03G0445700 Oryza sativa OS03G0445700 N 0.745
ORUFI07G21460 Oryza rufipogon ORUFI07G21460 N 0.722
ORUFI03G23490 Oryza rufipogon ORUFI03G23490 N 0.745
ORGLA07G0157700 Oryza glaberrima ORGLA07G0157700 N 0.722
ORGLA03G0213800 Oryza glaberrima ORGLA03G0213800 N 0.745
OPUNC07G19460 Oryza punctata OPUNC07G19460 N 0.722
OPUNC07G19440 Oryza punctata OPUNC07G19440 N 0.722
OB03G31560 Oryza brachyantha OB03G31560 N 0.735