CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRIUR3_18328
(
Triticum urartu
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
TRIUR3_18328
T246218_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LBD13
M06956_2.00
Arabidopsis thaliana
YGSCGDNDDHNVCGGHG
CDCCGBNDHHNHCGSCR
Dap-seq
OMalley et al.(2016)
LBD13_col_a
0.904
0.904
LBD13
M06957_2.00
Arabidopsis thaliana
CGSCGNNDDWNNCGG
CCGNNWHHNNCGSCG
Dap-seq
OMalley et al.(2016)
LBD13_colamp_a
0.904
0.904
LBD4
M02261_2.00
Arabidopsis thaliana
VDNVCGSNNN
NNNSCGBNHB
PBM
Weirauch et al.(2014)
pTH7515
0.712
0.712
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRIUR3_18328-P1
LOB
56
128
PCAACKLLRRRCAQECPFSPFFSPLEPHKFASVHKVFGASNVSKMLLEVHESQRGDAANSLVYEANLRLRAPV
Links
Other
LOB
family TFs
Other
Triticum urartu
TFs
193 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_1DS_BB8508CC6
Triticum aestivum
Traes_1DS_BB8508CC6
I
0.986
MLOC_56075
Hordeum vulgare
MLOC_56075
I
0.986
BRADI2G34520
Brachypodium distachyon
BRADI2G34520
I
0.986
F775_52636
Aegilops tauschii
F775_52636
I
0.986
Traes_1AS_43FB6A3CF
Triticum aestivum
Traes_1AS_43FB6A3CF
I
0.986
Traes_1BS_8F922CA93
Triticum aestivum
Traes_1BS_8F922CA93
I
0.986
LPERR05G04040
Leersia perrieri
LPERR05G04040
I
0.973
ONIVA05G04920
Oryza nivara
ONIVA05G04920
I
0.973
OS05G0165450
Oryza sativa
OS05G0165450
I
0.973
ORUFI05G04770
Oryza rufipogon
ORUFI05G04770
I
0.973
ORGLA05G0042200
Oryza glaberrima
ORGLA05G0042200
I
0.973
OBART05G04570
Oryza barthii
OBART05G04570
I
0.973
OMERI05G04500
Oryza meridionalis
OMERI05G04500
I
0.973
BGIOSGA018747
Oryza indica
BGIOSGA018747
I
0.973
OGLUM05G04450
Oryza glumaepatula
OGLUM05G04450
I
0.973
OLONG_007328
Oryza longistaminata
OLONG_007328
I
0.959
OB05G14280
Oryza brachyantha
OB05G14280
I
0.959
Si012018m.g
Setaria italica
Si012018m.g
I
0.945
Pavir.J00291
Panicum virgatum
Pavir.J00291
I
0.932
Sb09g004940
Sorghum bicolor
Sb09g004940
I
0.932
Pavir.Ca01098
Panicum virgatum
Pavir.Ca01098
I
0.918
LBD15
Arabidopsis lyrata
fgenesh2_kg.4__2164__AT2G40470.1
I
0.904
Cagra.1642s0010
Capsella grandiflora
Cagra.1642s0010
I
0.904
mgf020556m
Mimulus guttatus
mgf020556m
I
0.904
LBD13
Arabidopsis lyrata
fgenesh2_kg.4__1005__AT2G30340.1
I
0.904
Bostr.23794s0013
Boechera stricta
Bostr.23794s0013
I
0.904
Bostr.24513s0205
Boechera stricta
Bostr.24513s0205
I
0.904
Carubv10024002m.g
Capsella rubella
Carubv10024002m.g
I
0.904
Bra018320
Brassica rapa
Bra018320
I
0.904
Bo3g034980
Brassica oleracea
Bo3g034980
I
0.904
Bo4g059520
Brassica oleracea
Bo4g059520
I
0.904
Bo4g172950
Brassica oleracea
Bo4g172950
I
0.904
Bra000188
Brassica rapa
Bra000188
I
0.904
Thhalv10017073m.g
Eutrema salsugineum
Thhalv10017073m.g
I
0.904
Bra021627
Brassica rapa
Bra021627
I
0.904
chr2.CM1032.110.nc
Lotus japonicus
chr2.CM1032.110.nc
I
0.904
LBD13
Arabidopsis thaliana
AT2G30340
D
0.904
LBD15
Arabidopsis thaliana
AT2G40470
I
0.904
Lus10009930.g
Linum usitatissimum
Lus10009930.g
I
0.904
Bo4g190210
Brassica oleracea
Bo4g190210
I
0.890
Cla007391
Citrullus lanatus
Cla007391
I
0.890
PRUPE_ppa011757mg
Prunus persica
PRUPE_ppa011757mg
I
0.890
AMTR_s00007p00227160
Amborella trichopoda
AMTR_s00007p00227160
I
0.890
TCM_045438
Theobroma cacao
TCM_045438
I
0.890
Thhalv10017905m.g
Eutrema salsugineum
Thhalv10017905m.g
I
0.890
LBD15
Vitis vinifera
VIT_13s0067g02380
I
0.890
gene21311-v1.0-hybrid
Fragaria vesca
gene21311-v1.0-hybrid
I
0.890
evm.TU.supercontig_19.92
Carica papaya
evm.TU.supercontig_19.92
I
0.890
Aquca_005_00169
Aquilegia coerulea
Aquca_005_00169
I
0.890
cassava15554.m1
Manihot esculenta
cassava15554.m1
I
0.890
Gorai.009G295000
Gossypium raimondii
Gorai.009G295000
I
0.890
Bra016992
Brassica rapa
Bra016992
I
0.890
Ciclev10032684m.g
Citrus clementina
Ciclev10032684m.g
I
0.877
Lus10034208.g
Linum usitatissimum
Lus10034208.g
I
0.877
evm.TU.supercontig_2.327
Carica papaya
evm.TU.supercontig_2.327
I
0.877
chr1.CM0125.30.nd
Lotus japonicus
chr1.CM0125.30.nd
I
0.877
PGSC0003DMG400029080
Solanum tuberosum
PGSC0003DMG400029080
I
0.877
Bo4g012620
Brassica oleracea
Bo4g012620
I
0.877
GSMUA_AchrUn_randomG14060_001
Musa acuminata
GSMUA_AchrUn_randomG14060_001
I
0.877
MTR_5g083960
Medicago truncatula
MTR_5g083960
I
0.877
Bra004572
Brassica rapa
Bra004572
I
0.877
orange1.1g027307m.g
Citrus sinensis
orange1.1g027307m.g
I
0.877
cassava20848.m1
Manihot esculenta
cassava20848.m1
I
0.877
Cucsa.144080
Cucumis sativus
Cucsa.144080
I
0.877
Solyc06g050430.2
Solanum lycopersicum
Solyc06g050430.2
I
0.877
OS01G0825000
Oryza sativa
OS01G0825000
I
0.863
gene28137-v1.0-hybrid
Fragaria vesca
gene28137-v1.0-hybrid
I
0.863
MDP0000278334
Malus domestica
MDP0000278334
I
0.863
POPTR_0013s08040
Populus trichocarpa
POPTR_0013s08040
I
0.863
mgf011471m
Mimulus guttatus
mgf011471m
I
0.863
Si004575m.g
Setaria italica
Si004575m.g
I
0.863
GSMUA_Achr5G07460_001
Musa acuminata
GSMUA_Achr5G07460_001
I
0.863
GSMUA_Achr11G08330_001
Musa acuminata
GSMUA_Achr11G08330_001
I
0.863
BGIOSGA004719
Oryza indica
BGIOSGA004719
I
0.863
MTR_3g094690
Medicago truncatula
MTR_3g094690
I
0.863
OGLUM01G39690
Oryza glumaepatula
OGLUM01G39690
I
0.863
LPERR01G30700
Leersia perrieri
LPERR01G30700
I
0.863
ONIVA01G40640
Oryza nivara
ONIVA01G40640
I
0.863
OMERI01G32750
Oryza meridionalis
OMERI01G32750
I
0.863
OPUNC01G34540
Oryza punctata
OPUNC01G34540
I
0.863
OBART01G35680
Oryza barthii
OBART01G35680
I
0.863
ORUFI01G39050
Oryza rufipogon
ORUFI01G39050
I
0.863
ORGLA01G0294900
Oryza glaberrima
ORGLA01G0294900
I
0.863
OLONG_000658
Oryza longistaminata
OLONG_000658
I
0.863
GLYMA14G38280
Glycine max
GLYMA14G38280
I
0.863
BRADI2G53690
Brachypodium distachyon
BRADI2G53690
I
0.863
Pavir.Eb03580
Panicum virgatum
Pavir.Eb03580
I
0.849
MTR_5g075020
Medicago truncatula
MTR_5g075020
I
0.849
TRIUR3_34193
Triticum urartu
TRIUR3_34193
I
0.849
F775_25790
Aegilops tauschii
F775_25790
I
0.849
GSMUA_Achr7G22200_001
Musa acuminata
GSMUA_Achr7G22200_001
I
0.849
PGSC0003DMG400030461
Solanum tuberosum
PGSC0003DMG400030461
I
0.849
GLYMA02G40080
Glycine max
GLYMA02G40080
I
0.849
Gorai.013G005900
Gossypium raimondii
Gorai.013G005900
I
0.849
GRMZM2G092517
Zea mays
GRMZM2G092517
I
0.849
cassava31953.m1
Manihot esculenta
cassava31953.m1
I
0.849
Sb03g038410
Sorghum bicolor
Sb03g038410
I
0.849
Pavir.Ea03276
Panicum virgatum
Pavir.Ea03276
I
0.836
29957.m001411
Ricinus communis
29957.m001411
I
0.836
LBD13
Vitis vinifera
VIT_06s0004g07790
I
0.836
SapurV1A.0222s0070
Salix purpurea
SapurV1A.0222s0070
I
0.836
PDK_20s1387061g002
Phoenix dactylifera
PDK_20s1387061g002
I
0.836
POPTR_0013s15220
Populus trichocarpa
POPTR_0013s15220
I
0.836
gw1.9.232.1
Physcomitrella patens
gw1.9.232.1
I
0.822
PGSC0003DMG400020562
Solanum tuberosum
PGSC0003DMG400020562
I
0.822
PGSC0003DMG400008649
Solanum tuberosum
PGSC0003DMG400008649
I
0.753
Solyc11g045530.1
Solanum lycopersicum
Solyc11g045530.1
I
0.753
Cla013678
Citrullus lanatus
Cla013678
I
0.740
PK11564.1
Cannabis sativa
PK11564.1
I
0.740
evm.TU.supercontig_192.6
Carica papaya
evm.TU.supercontig_192.6
I
0.740
LBD3
Vitis vinifera
VIT_19s0027g01120
I
0.740
mgf026046m
Mimulus guttatus
mgf026046m
I
0.740
Cucsa.118370
Cucumis sativus
Cucsa.118370
I
0.740
Pavir.J18260
Panicum virgatum
Pavir.J18260
I
0.726
POPTR_0007s08290
Populus trichocarpa
POPTR_0007s08290
I
0.726
gene20083-v1.0-hybrid
Fragaria vesca
gene20083-v1.0-hybrid
I
0.726
orange1.1g044340m.g
Citrus sinensis
orange1.1g044340m.g
I
0.726
MDP0000121203
Malus domestica
MDP0000121203
I
0.726
Pavir.Ib04170
Panicum virgatum
Pavir.Ib04170
I
0.726
Aquca_118_00035
Aquilegia coerulea
Aquca_118_00035
I
0.726
TCM_032557
Theobroma cacao
TCM_032557
I
0.726
MDP0000268890
Malus domestica
MDP0000268890
I
0.726
Ciclev10006113m.g
Citrus clementina
Ciclev10006113m.g
I
0.726
MDP0000277239
Malus domestica
MDP0000277239
I
0.726
MDP0000284409
Malus domestica
MDP0000284409
I
0.726
GRMZM2G447176
Zea mays
GRMZM2G447176
I
0.726
PGSC0003DMG402023851
Solanum tuberosum
PGSC0003DMG402023851
I
0.726
Si037583m.g
Setaria italica
Si037583m.g
I
0.726
Lus10018275.g
Linum usitatissimum
Lus10018275.g
I
0.726
TRIUR3_27421
Triticum urartu
TRIUR3_27421
I
0.726
F775_24149
Aegilops tauschii
F775_24149
I
0.726
SELMODRAFT_49085
Selaginella moellendorffii
SELMODRAFT_49085
I
0.726
Sb01g012810
Sorghum bicolor
Sb01g012810
I
0.726
MTR_4g083680
Medicago truncatula
MTR_4g083680
I
0.726
Pavir.Ia01095
Panicum virgatum
Pavir.Ia01095
I
0.726
PRUPE_ppa012322mg
Prunus persica
PRUPE_ppa012322mg
I
0.726
Pm011040
Prunus mume
Pm011040
I
0.726
30169.m006340
Ricinus communis
30169.m006340
I
0.726
SapurV1A.0284s0080
Salix purpurea
SapurV1A.0284s0080
I
0.726
PRUPE_ppa012253mg
Prunus persica
PRUPE_ppa012253mg
I
0.726
cassava27818.m1
Manihot esculenta
cassava27818.m1
I
0.726
Solyc02g069440.2
Solanum lycopersicum
Solyc02g069440.2
I
0.726
chr4.CM0229.130.nc
Lotus japonicus
chr4.CM0229.130.nc
I
0.712
Lus10040638.g
Linum usitatissimum
Lus10040638.g
I
0.712
Bo4g059700
Brassica oleracea
Bo4g059700
I
0.712
Gorai.010G170700
Gossypium raimondii
Gorai.010G170700
I
0.712
SapurV1A.0059s0540
Salix purpurea
SapurV1A.0059s0540
I
0.712
LBD4
Arabidopsis thaliana
AT1G31320
D
0.712
LBD12
Arabidopsis thaliana
AT2G30130
I
0.712
Bo7g041000
Brassica oleracea
Bo7g041000
I
0.712
BGIOSGA013249
Oryza indica
BGIOSGA013249
I
0.712
orange1.1g036782m.g
Citrus sinensis
orange1.1g036782m.g
I
0.712
orange1.1g031034m.g
Citrus sinensis
orange1.1g031034m.g
I
0.712
Bra018335
Brassica rapa
Bra018335
I
0.712
Bra014907
Brassica rapa
Bra014907
I
0.712
Thhalv10008917m.g
Eutrema salsugineum
Thhalv10008917m.g
I
0.712
MDP0000265429
Malus domestica
MDP0000265429
I
0.712
GSMUA_Achr4G32000_001
Musa acuminata
GSMUA_Achr4G32000_001
I
0.712
OGLUM04G05130
Oryza glumaepatula
OGLUM04G05130
I
0.712
Si026864m.g
Setaria italica
Si026864m.g
I
0.712
Si024229m.g
Setaria italica
Si024229m.g
I
0.712
Solyc12g100150.1
Solanum lycopersicum
Solyc12g100150.1
I
0.712
OBART05G12620
Oryza barthii
OBART05G12620
I
0.712
Ca_08998
Cicer arietinum
Ca_08998
I
0.712
LBD4
Vitis vinifera
VIT_00s0125g00290
I
0.712
SELMODRAFT_58936
Selaginella moellendorffii
SELMODRAFT_58936
I
0.712
SELMODRAFT_48883
Selaginella moellendorffii
SELMODRAFT_48883
I
0.712
POPTR_0010s19180
Populus trichocarpa
POPTR_0010s19180
I
0.712
PGSC0003DMG400021204
Solanum tuberosum
PGSC0003DMG400021204
I
0.712
ORGLA05G0108100
Oryza glaberrima
ORGLA05G0108100
I
0.712
ONIVA03G29300
Oryza nivara
ONIVA03G29300
I
0.712
PRUPE_ppa012504mg
Prunus persica
PRUPE_ppa012504mg
I
0.712
Sb09g016240
Sorghum bicolor
Sb09g016240
I
0.712
OMERI03G24920
Oryza meridionalis
OMERI03G24920
I
0.712
Cla009336
Citrullus lanatus
Cla009336
I
0.712
cassava30732.valid.m1
Manihot esculenta
cassava30732.valid.m1
I
0.712
GLYMA07G35000
Glycine max
GLYMA07G35000
I
0.712
Ciclev10032929m.g
Citrus clementina
Ciclev10032929m.g
I
0.712
Ciclev10016993m.g
Citrus clementina
Ciclev10016993m.g
I
0.712
gene21039-v1.0-hybrid
Fragaria vesca
gene21039-v1.0-hybrid
I
0.712
ASL5
Arabidopsis lyrata
fgenesh2_kg.4__983__AT2G30130.1
I
0.712
Gorai.002G104500
Gossypium raimondii
Gorai.002G104500
I
0.712
LBD4
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1002773
I
0.712
Carubv10025543m.g
Capsella rubella
Carubv10025543m.g
I
0.712
GLYMA20G02850
Glycine max
GLYMA20G02850
I
0.712
GSMUA_Achr2G13170_001
Musa acuminata
GSMUA_Achr2G13170_001
I
0.712
mgf018189m
Mimulus guttatus
mgf018189m
I
0.712
ORUFI03G29410
Oryza rufipogon
ORUFI03G29410
I
0.712
Bostr.15697s0446
Boechera stricta
Bostr.15697s0446
I
0.712
Cagra.1508s0061
Capsella grandiflora
Cagra.1508s0061
I
0.712
Carubv10010462m.g
Capsella rubella
Carubv10010462m.g
I
0.712
GRMZM2G025989
Zea mays
GRMZM2G025989
I
0.712
Gorai.009G149900
Gossypium raimondii
Gorai.009G149900
I
0.712