TRIUR3_18328 (Triticum urartu)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 TRIUR3_18328 T246218_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LBD13
M06956_2.00
Arabidopsis thaliana
YGSCGDNDDHNVCGGHG

CDCCGBNDHHNHCGSCR
Dap-seq
OMalley et al.(2016)
LBD13_col_a
0.904 0.904
LBD13
M06957_2.00
Arabidopsis thaliana
CGSCGNNDDWNNCGG

CCGNNWHHNNCGSCG
Dap-seq
OMalley et al.(2016)
LBD13_colamp_a
0.904 0.904
LBD4
M02261_2.00
Arabidopsis thaliana
VDNVCGSNNN

NNNSCGBNHB
PBM
Weirauch et al.(2014)
pTH7515
0.712 0.712
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TRIUR3_18328-P1 LOB 56 128

Links

Other LOB family TFs
Other Triticum urartu TFs

193 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Traes_1DS_BB8508CC6 Triticum aestivum Traes_1DS_BB8508CC6 I 0.986
MLOC_56075 Hordeum vulgare MLOC_56075 I 0.986
BRADI2G34520 Brachypodium distachyon BRADI2G34520 I 0.986
F775_52636 Aegilops tauschii F775_52636 I 0.986
Traes_1AS_43FB6A3CF Triticum aestivum Traes_1AS_43FB6A3CF I 0.986
Traes_1BS_8F922CA93 Triticum aestivum Traes_1BS_8F922CA93 I 0.986
LPERR05G04040 Leersia perrieri LPERR05G04040 I 0.973
ONIVA05G04920 Oryza nivara ONIVA05G04920 I 0.973
OS05G0165450 Oryza sativa OS05G0165450 I 0.973
ORUFI05G04770 Oryza rufipogon ORUFI05G04770 I 0.973
ORGLA05G0042200 Oryza glaberrima ORGLA05G0042200 I 0.973
OBART05G04570 Oryza barthii OBART05G04570 I 0.973
OMERI05G04500 Oryza meridionalis OMERI05G04500 I 0.973
BGIOSGA018747 Oryza indica BGIOSGA018747 I 0.973
OGLUM05G04450 Oryza glumaepatula OGLUM05G04450 I 0.973
OLONG_007328 Oryza longistaminata OLONG_007328 I 0.959
OB05G14280 Oryza brachyantha OB05G14280 I 0.959
Si012018m.g Setaria italica Si012018m.g I 0.945
Pavir.J00291 Panicum virgatum Pavir.J00291 I 0.932
Sb09g004940 Sorghum bicolor Sb09g004940 I 0.932
Pavir.Ca01098 Panicum virgatum Pavir.Ca01098 I 0.918
LBD15 Arabidopsis lyrata fgenesh2_kg.4__2164__AT2G40470.1 I 0.904
Cagra.1642s0010 Capsella grandiflora Cagra.1642s0010 I 0.904
mgf020556m Mimulus guttatus mgf020556m I 0.904
LBD13 Arabidopsis lyrata fgenesh2_kg.4__1005__AT2G30340.1 I 0.904
Bostr.23794s0013 Boechera stricta Bostr.23794s0013 I 0.904
Bostr.24513s0205 Boechera stricta Bostr.24513s0205 I 0.904
Carubv10024002m.g Capsella rubella Carubv10024002m.g I 0.904
Bra018320 Brassica rapa Bra018320 I 0.904
Bo3g034980 Brassica oleracea Bo3g034980 I 0.904
Bo4g059520 Brassica oleracea Bo4g059520 I 0.904
Bo4g172950 Brassica oleracea Bo4g172950 I 0.904
Bra000188 Brassica rapa Bra000188 I 0.904
Thhalv10017073m.g Eutrema salsugineum Thhalv10017073m.g I 0.904
Bra021627 Brassica rapa Bra021627 I 0.904
chr2.CM1032.110.nc Lotus japonicus chr2.CM1032.110.nc I 0.904
LBD13 Arabidopsis thaliana AT2G30340 D 0.904
LBD15 Arabidopsis thaliana AT2G40470 I 0.904
Lus10009930.g Linum usitatissimum Lus10009930.g I 0.904
Bo4g190210 Brassica oleracea Bo4g190210 I 0.890
Cla007391 Citrullus lanatus Cla007391 I 0.890
PRUPE_ppa011757mg Prunus persica PRUPE_ppa011757mg I 0.890
AMTR_s00007p00227160 Amborella trichopoda AMTR_s00007p00227160 I 0.890
TCM_045438 Theobroma cacao TCM_045438 I 0.890
Thhalv10017905m.g Eutrema salsugineum Thhalv10017905m.g I 0.890
LBD15 Vitis vinifera VIT_13s0067g02380 I 0.890
gene21311-v1.0-hybrid Fragaria vesca gene21311-v1.0-hybrid I 0.890
evm.TU.supercontig_19.92 Carica papaya evm.TU.supercontig_19.92 I 0.890
Aquca_005_00169 Aquilegia coerulea Aquca_005_00169 I 0.890
cassava15554.m1 Manihot esculenta cassava15554.m1 I 0.890
Gorai.009G295000 Gossypium raimondii Gorai.009G295000 I 0.890
Bra016992 Brassica rapa Bra016992 I 0.890
Ciclev10032684m.g Citrus clementina Ciclev10032684m.g I 0.877
Lus10034208.g Linum usitatissimum Lus10034208.g I 0.877
evm.TU.supercontig_2.327 Carica papaya evm.TU.supercontig_2.327 I 0.877
chr1.CM0125.30.nd Lotus japonicus chr1.CM0125.30.nd I 0.877
PGSC0003DMG400029080 Solanum tuberosum PGSC0003DMG400029080 I 0.877
Bo4g012620 Brassica oleracea Bo4g012620 I 0.877
GSMUA_AchrUn_randomG14060_001 Musa acuminata GSMUA_AchrUn_randomG14060_001 I 0.877
MTR_5g083960 Medicago truncatula MTR_5g083960 I 0.877
Bra004572 Brassica rapa Bra004572 I 0.877
orange1.1g027307m.g Citrus sinensis orange1.1g027307m.g I 0.877
cassava20848.m1 Manihot esculenta cassava20848.m1 I 0.877
Cucsa.144080 Cucumis sativus Cucsa.144080 I 0.877
Solyc06g050430.2 Solanum lycopersicum Solyc06g050430.2 I 0.877
OS01G0825000 Oryza sativa OS01G0825000 I 0.863
gene28137-v1.0-hybrid Fragaria vesca gene28137-v1.0-hybrid I 0.863
MDP0000278334 Malus domestica MDP0000278334 I 0.863
POPTR_0013s08040 Populus trichocarpa POPTR_0013s08040 I 0.863
mgf011471m Mimulus guttatus mgf011471m I 0.863
Si004575m.g Setaria italica Si004575m.g I 0.863
GSMUA_Achr5G07460_001 Musa acuminata GSMUA_Achr5G07460_001 I 0.863
GSMUA_Achr11G08330_001 Musa acuminata GSMUA_Achr11G08330_001 I 0.863
BGIOSGA004719 Oryza indica BGIOSGA004719 I 0.863
MTR_3g094690 Medicago truncatula MTR_3g094690 I 0.863
OGLUM01G39690 Oryza glumaepatula OGLUM01G39690 I 0.863
LPERR01G30700 Leersia perrieri LPERR01G30700 I 0.863
ONIVA01G40640 Oryza nivara ONIVA01G40640 I 0.863
OMERI01G32750 Oryza meridionalis OMERI01G32750 I 0.863
OPUNC01G34540 Oryza punctata OPUNC01G34540 I 0.863
OBART01G35680 Oryza barthii OBART01G35680 I 0.863
ORUFI01G39050 Oryza rufipogon ORUFI01G39050 I 0.863
ORGLA01G0294900 Oryza glaberrima ORGLA01G0294900 I 0.863
OLONG_000658 Oryza longistaminata OLONG_000658 I 0.863
GLYMA14G38280 Glycine max GLYMA14G38280 I 0.863
BRADI2G53690 Brachypodium distachyon BRADI2G53690 I 0.863
Pavir.Eb03580 Panicum virgatum Pavir.Eb03580 I 0.849
MTR_5g075020 Medicago truncatula MTR_5g075020 I 0.849
TRIUR3_34193 Triticum urartu TRIUR3_34193 I 0.849
F775_25790 Aegilops tauschii F775_25790 I 0.849
GSMUA_Achr7G22200_001 Musa acuminata GSMUA_Achr7G22200_001 I 0.849
PGSC0003DMG400030461 Solanum tuberosum PGSC0003DMG400030461 I 0.849
GLYMA02G40080 Glycine max GLYMA02G40080 I 0.849
Gorai.013G005900 Gossypium raimondii Gorai.013G005900 I 0.849
GRMZM2G092517 Zea mays GRMZM2G092517 I 0.849
cassava31953.m1 Manihot esculenta cassava31953.m1 I 0.849
Sb03g038410 Sorghum bicolor Sb03g038410 I 0.849
Pavir.Ea03276 Panicum virgatum Pavir.Ea03276 I 0.836
29957.m001411 Ricinus communis 29957.m001411 I 0.836
LBD13 Vitis vinifera VIT_06s0004g07790 I 0.836
SapurV1A.0222s0070 Salix purpurea SapurV1A.0222s0070 I 0.836
PDK_20s1387061g002 Phoenix dactylifera PDK_20s1387061g002 I 0.836
POPTR_0013s15220 Populus trichocarpa POPTR_0013s15220 I 0.836
gw1.9.232.1 Physcomitrella patens gw1.9.232.1 I 0.822
PGSC0003DMG400020562 Solanum tuberosum PGSC0003DMG400020562 I 0.822
PGSC0003DMG400008649 Solanum tuberosum PGSC0003DMG400008649 I 0.753
Solyc11g045530.1 Solanum lycopersicum Solyc11g045530.1 I 0.753
Cla013678 Citrullus lanatus Cla013678 I 0.740
PK11564.1 Cannabis sativa PK11564.1 I 0.740
evm.TU.supercontig_192.6 Carica papaya evm.TU.supercontig_192.6 I 0.740
LBD3 Vitis vinifera VIT_19s0027g01120 I 0.740
mgf026046m Mimulus guttatus mgf026046m I 0.740
Cucsa.118370 Cucumis sativus Cucsa.118370 I 0.740
Pavir.J18260 Panicum virgatum Pavir.J18260 I 0.726
POPTR_0007s08290 Populus trichocarpa POPTR_0007s08290 I 0.726
gene20083-v1.0-hybrid Fragaria vesca gene20083-v1.0-hybrid I 0.726
orange1.1g044340m.g Citrus sinensis orange1.1g044340m.g I 0.726
MDP0000121203 Malus domestica MDP0000121203 I 0.726
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I 0.726
Aquca_118_00035 Aquilegia coerulea Aquca_118_00035 I 0.726
TCM_032557 Theobroma cacao TCM_032557 I 0.726
MDP0000268890 Malus domestica MDP0000268890 I 0.726
Ciclev10006113m.g Citrus clementina Ciclev10006113m.g I 0.726
MDP0000277239 Malus domestica MDP0000277239 I 0.726
MDP0000284409 Malus domestica MDP0000284409 I 0.726
GRMZM2G447176 Zea mays GRMZM2G447176 I 0.726
PGSC0003DMG402023851 Solanum tuberosum PGSC0003DMG402023851 I 0.726
Si037583m.g Setaria italica Si037583m.g I 0.726
Lus10018275.g Linum usitatissimum Lus10018275.g I 0.726
TRIUR3_27421 Triticum urartu TRIUR3_27421 I 0.726
F775_24149 Aegilops tauschii F775_24149 I 0.726
SELMODRAFT_49085 Selaginella moellendorffii SELMODRAFT_49085 I 0.726
Sb01g012810 Sorghum bicolor Sb01g012810 I 0.726
MTR_4g083680 Medicago truncatula MTR_4g083680 I 0.726
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I 0.726
PRUPE_ppa012322mg Prunus persica PRUPE_ppa012322mg I 0.726
Pm011040 Prunus mume Pm011040 I 0.726
30169.m006340 Ricinus communis 30169.m006340 I 0.726
SapurV1A.0284s0080 Salix purpurea SapurV1A.0284s0080 I 0.726
PRUPE_ppa012253mg Prunus persica PRUPE_ppa012253mg I 0.726
cassava27818.m1 Manihot esculenta cassava27818.m1 I 0.726
Solyc02g069440.2 Solanum lycopersicum Solyc02g069440.2 I 0.726
chr4.CM0229.130.nc Lotus japonicus chr4.CM0229.130.nc I 0.712
Lus10040638.g Linum usitatissimum Lus10040638.g I 0.712
Bo4g059700 Brassica oleracea Bo4g059700 I 0.712
Gorai.010G170700 Gossypium raimondii Gorai.010G170700 I 0.712
SapurV1A.0059s0540 Salix purpurea SapurV1A.0059s0540 I 0.712
LBD4 Arabidopsis thaliana AT1G31320 D 0.712
LBD12 Arabidopsis thaliana AT2G30130 I 0.712
Bo7g041000 Brassica oleracea Bo7g041000 I 0.712
BGIOSGA013249 Oryza indica BGIOSGA013249 I 0.712
orange1.1g036782m.g Citrus sinensis orange1.1g036782m.g I 0.712
orange1.1g031034m.g Citrus sinensis orange1.1g031034m.g I 0.712
Bra018335 Brassica rapa Bra018335 I 0.712
Bra014907 Brassica rapa Bra014907 I 0.712
Thhalv10008917m.g Eutrema salsugineum Thhalv10008917m.g I 0.712
MDP0000265429 Malus domestica MDP0000265429 I 0.712
GSMUA_Achr4G32000_001 Musa acuminata GSMUA_Achr4G32000_001 I 0.712
OGLUM04G05130 Oryza glumaepatula OGLUM04G05130 I 0.712
Si026864m.g Setaria italica Si026864m.g I 0.712
Si024229m.g Setaria italica Si024229m.g I 0.712
Solyc12g100150.1 Solanum lycopersicum Solyc12g100150.1 I 0.712
OBART05G12620 Oryza barthii OBART05G12620 I 0.712
Ca_08998 Cicer arietinum Ca_08998 I 0.712
LBD4 Vitis vinifera VIT_00s0125g00290 I 0.712
SELMODRAFT_58936 Selaginella moellendorffii SELMODRAFT_58936 I 0.712
SELMODRAFT_48883 Selaginella moellendorffii SELMODRAFT_48883 I 0.712
POPTR_0010s19180 Populus trichocarpa POPTR_0010s19180 I 0.712
PGSC0003DMG400021204 Solanum tuberosum PGSC0003DMG400021204 I 0.712
ORGLA05G0108100 Oryza glaberrima ORGLA05G0108100 I 0.712
ONIVA03G29300 Oryza nivara ONIVA03G29300 I 0.712
PRUPE_ppa012504mg Prunus persica PRUPE_ppa012504mg I 0.712
Sb09g016240 Sorghum bicolor Sb09g016240 I 0.712
OMERI03G24920 Oryza meridionalis OMERI03G24920 I 0.712
Cla009336 Citrullus lanatus Cla009336 I 0.712
cassava30732.valid.m1 Manihot esculenta cassava30732.valid.m1 I 0.712
GLYMA07G35000 Glycine max GLYMA07G35000 I 0.712
Ciclev10032929m.g Citrus clementina Ciclev10032929m.g I 0.712
Ciclev10016993m.g Citrus clementina Ciclev10016993m.g I 0.712
gene21039-v1.0-hybrid Fragaria vesca gene21039-v1.0-hybrid I 0.712
ASL5 Arabidopsis lyrata fgenesh2_kg.4__983__AT2G30130.1 I 0.712
Gorai.002G104500 Gossypium raimondii Gorai.002G104500 I 0.712
LBD4 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002773 I 0.712
Carubv10025543m.g Capsella rubella Carubv10025543m.g I 0.712
GLYMA20G02850 Glycine max GLYMA20G02850 I 0.712
GSMUA_Achr2G13170_001 Musa acuminata GSMUA_Achr2G13170_001 I 0.712
mgf018189m Mimulus guttatus mgf018189m I 0.712
ORUFI03G29410 Oryza rufipogon ORUFI03G29410 I 0.712
Bostr.15697s0446 Boechera stricta Bostr.15697s0446 I 0.712
Cagra.1508s0061 Capsella grandiflora Cagra.1508s0061 I 0.712
Carubv10010462m.g Capsella rubella Carubv10010462m.g I 0.712
GRMZM2G025989 Zea mays GRMZM2G025989 I 0.712
Gorai.009G149900 Gossypium raimondii Gorai.009G149900 I 0.712