Ca_05488 (Cicer arietinum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Ca_05488 T246287_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_05488 LOB 4 107

Links

Other LOB family TFs
Other Cicer arietinum TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00079p00088960 Amborella trichopoda AMTR_s00079p00088960 N 0.714
Aquca_026_00293 Aquilegia coerulea Aquca_026_00293 N 0.704
BGIOSGA001546 Oryza indica BGIOSGA001546 N 0.727
BRADI4G16740 Brachypodium distachyon BRADI4G16740 N 0.717
BRADI4G16750 Brachypodium distachyon BRADI4G16750 N 0.717
cassava6185.valid.m1 Manihot esculenta cassava6185.valid.m1 N 0.714
Ciclev10013705m.g Citrus clementina Ciclev10013705m.g N 0.717
Cla007208 Citrullus lanatus Cla007208 N 0.714
Cucsa.031350 Cucumis sativus Cucsa.031350 N 0.714
Eucgr.J01501 Eucalyptus grandis Eucgr.J01501 N 0.714
evm.TU.supercontig_3.514 Carica papaya evm.TU.supercontig_3.514 N 0.707
GLYMA08G31143 Glycine max GLYMA08G31143 N 0.707
GLYMA20G24950 Glycine max GLYMA20G24950 N 0.788
GRMZM2G060544 Zea mays GRMZM2G060544 N 0.707
GRMZM2G073044 Zea mays GRMZM2G073044 N 0.727
GRMZM2G386674 Zea mays GRMZM2G386674 N 0.714
GSMUA_Achr3G29520_001 Musa acuminata GSMUA_Achr3G29520_001 N 0.717
GSMUA_Achr4G06820_001 Musa acuminata GSMUA_Achr4G06820_001 N 0.704
GSMUA_Achr4G13790_001 Musa acuminata GSMUA_Achr4G13790_001 N 0.714
GSMUA_Achr9G21360_001 Musa acuminata GSMUA_Achr9G21360_001 N 0.714
LPERR01G15290 Leersia perrieri LPERR01G15290 N 0.727
MTR_1g110840 Medicago truncatula MTR_1g110840 N 0.788
MTR_6g054080 Medicago truncatula MTR_6g054080 N 0.747
MTR_6g054150 Medicago truncatula MTR_6g054150 N 0.778
MTR_6g453130 Medicago truncatula MTR_6g453130 N 0.818
MTR_7g007010 Medicago truncatula MTR_7g007010 N 0.707
OBART01G17510 Oryza barthii OBART01G17510 N 0.727
OGLUM01G20320 Oryza glumaepatula OGLUM01G20320 N 0.727
OMERI01G16320 Oryza meridionalis OMERI01G16320 N 0.727
ONIVA01G19320 Oryza nivara ONIVA01G19320 N 0.727
OPUNC01G18000 Oryza punctata OPUNC01G18000 N 0.727
orange1.1g022591m.g Citrus sinensis orange1.1g022591m.g N 0.717
ORUFI01G19440 Oryza rufipogon ORUFI01G19440 N 0.727
OS01G0511000 Oryza sativa OS01G0511000 N 0.727
Pavir.Ea01295 Panicum virgatum Pavir.Ea01295 N 0.735
Pavir.Eb02390 Panicum virgatum Pavir.Eb02390 N 0.717
Pavir.J01483 Panicum virgatum Pavir.J01483 N 0.704
PK03169.1 Cannabis sativa PK03169.1 N 0.707
PK04625.1 Cannabis sativa PK04625.1 N 0.814
POPTR_0004s09920 Populus trichocarpa POPTR_0004s09920 N 0.707
Sb01g032580 Sorghum bicolor Sb01g032580 N 0.727
Sb09g030780 Sorghum bicolor Sb09g030780 N 0.714
Si004887m.g Setaria italica Si004887m.g N 0.750
Si022660m.g Setaria italica Si022660m.g N 0.707
TCM_019459 Theobroma cacao TCM_019459 N 0.707
Thhalv10019048m.g Eutrema salsugineum Thhalv10019048m.g N 0.717
TRAES3BF008500030CFD_g Triticum aestivum TRAES3BF008500030CFD_g N 0.717
TRAES3BF008600030CFD_g Triticum aestivum TRAES3BF008600030CFD_g N 0.717