Cla004059 (Citrullus lanatus)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Cla004059 T246327_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla004059 LOB 13 112

Links

Other LOB family TFs
Other Citrullus lanatus TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.165150 Cucumis sativus Cucsa.165150 N 0.980
TCM_042730 Theobroma cacao TCM_042730 I 0.818
PK00972.1 Cannabis sativa PK00972.1 I 0.800
Gorai.011G267700 Gossypium raimondii Gorai.011G267700 I 0.798
Eucgr.G02955 Eucalyptus grandis Eucgr.G02955 I 0.788
POPTR_0010s20800 Populus trichocarpa POPTR_0010s20800 I 0.778
LBD33 Arabidopsis lyrata Al_scaffold_0006_527 N 0.778
Cagra.2117s0054 Capsella grandiflora Cagra.2117s0054 N 0.778
cassava34632.m1 Manihot esculenta cassava34632.m1 N 0.778
Carubv10002921m.g Capsella rubella Carubv10002921m.g N 0.778
Ca_16122 Cicer arietinum Ca_16122 N 0.778
Bostr.13129s0366 Boechera stricta Bostr.13129s0366 N 0.768
evm.TU.supercontig_1.438 Carica papaya evm.TU.supercontig_1.438 I 0.768
LBD33 Arabidopsis thaliana AT5G06080 N 0.768
LBD33 Vitis vinifera VIT_13s0019g02060 N 0.768
SapurV1A.0281s0190 Salix purpurea SapurV1A.0281s0190 I 0.768
GLYMA14G07260 Glycine max GLYMA14G07260 N 0.758
MTR_5g080470 Medicago truncatula MTR_5g080470 N 0.758
30143.m001171 Ricinus communis 30143.m001171 N 0.758
Bra009161 Brassica rapa Bra009161 N 0.747
Bo9g176580 Brassica oleracea Bo9g176580 N 0.747
gene26330-v1.0-hybrid Fragaria vesca gene26330-v1.0-hybrid N 0.747
cassava15468.m1 Manihot esculenta cassava15468.m1 I 0.745
MDP0000133936 Malus domestica MDP0000133936 N 0.737
GLYMA02G41710 Glycine max GLYMA02G41710 N 0.737
Ciclev10033354m.g Citrus clementina Ciclev10033354m.g I 0.737
MDP0000123797 Malus domestica MDP0000123797 N 0.737
Pm018835 Prunus mume Pm018835 N 0.727
PRUPE_ppa018815mg Prunus persica PRUPE_ppa018815mg N 0.727
LjSGA_054888.1 Lotus japonicus LjSGA_054888.1 I 0.716
POPTR_0002s14990 Populus trichocarpa POPTR_0002s14990 I 0.709