Pm002404 (Prunus mume)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Pm002404 T246362_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm002404 LOB 2 68

Links

Other LOB family TFs
Other Prunus mume TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.007G222000 Gossypium raimondii Gorai.007G222000 N 0.871
LPERR07G17890 Leersia perrieri LPERR07G17890 N 0.857
Ciclev10026374m.g Citrus clementina Ciclev10026374m.g N 0.855
evm.TU.supercontig_6.40 Carica papaya evm.TU.supercontig_6.40 N 0.855
Cucsa.103050 Cucumis sativus Cucsa.103050 N 0.855
cassava226.valid.m1 Manihot esculenta cassava226.valid.m1 N 0.855
Cla014228 Citrullus lanatus Cla014228 N 0.855
orange1.1g026365m.g Citrus sinensis orange1.1g026365m.g N 0.855
Eucgr.H02293 Eucalyptus grandis Eucgr.H02293 N 0.855
PK03075.1 Cannabis sativa PK03075.1 N 0.855
LjSGA_036652.1 Lotus japonicus LjSGA_036652.1 N 0.845
chr4.CM0128.270.nc Lotus japonicus chr4.CM0128.270.nc N 0.839
SapurV1A.0116s0210 Salix purpurea SapurV1A.0116s0210 N 0.839
POPTR_0007s10010 Populus trichocarpa POPTR_0007s10010 N 0.839
MTR_4g095600 Medicago truncatula MTR_4g095600 N 0.839
GRMZM2G044902 Zea mays GRMZM2G044902 N 0.828
PK25954.1 Cannabis sativa PK25954.1 N 0.826
AMTR_s00137p00051070 Amborella trichopoda AMTR_s00137p00051070 N 0.823
POPTR_0005s18900 Populus trichocarpa POPTR_0005s18900 N 0.823
Carubv10005616m.g Capsella rubella Carubv10005616m.g N 0.823
VIT_07s0129g00330 Vitis vinifera VIT_07s0129g00330 N 0.823
Cagra.4491s0014 Capsella grandiflora Cagra.4491s0014 N 0.823
Carubv10017944m.g Capsella rubella Carubv10017944m.g N 0.823
Ca_09342 Cicer arietinum Ca_09342 N 0.823
Cagra.10957s0002 Capsella grandiflora Cagra.10957s0002 N 0.823
LBD38 Arabidopsis lyrata scaffold_502015.1 N 0.823
Bo2g168020 Brassica oleracea Bo2g168020 N 0.806
Cagra.0342s0030 Capsella grandiflora Cagra.0342s0030 N 0.806
Bo7g063630 Brassica oleracea Bo7g063630 N 0.806
gw1.167.132.1 Physcomitrella patens gw1.167.132.1 N 0.806
Bostr.0568s0168 Boechera stricta Bostr.0568s0168 N 0.806
Carubv10027507m.g Capsella rubella Carubv10027507m.g N 0.806
Bra037847 Brassica rapa Bra037847 N 0.806
Bra036040 Brassica rapa Bra036040 N 0.806
Thhalv10004811m.g Eutrema salsugineum Thhalv10004811m.g N 0.806
Bra012164 Brassica rapa Bra012164 N 0.806
LBD37 Arabidopsis lyrata fgenesh2_kg.8__2670__AT5G67420.1 N 0.806
MTR_5g015880 Medicago truncatula MTR_5g015880 N 0.806
Bo8g079200 Brassica oleracea Bo8g079200 N 0.806
GSMUA_Achr4G14150_001 Musa acuminata GSMUA_Achr4G14150_001 N 0.806
Pavir.Ia03080 Panicum virgatum Pavir.Ia03080 N 0.790
SELMODRAFT_37570 Selaginella moellendorffii SELMODRAFT_37570 N 0.790
Thhalv10026086m.g Eutrema salsugineum Thhalv10026086m.g N 0.790
SELMODRAFT_37566 Selaginella moellendorffii SELMODRAFT_37566 N 0.790
Si037346m.g Setaria italica Si037346m.g N 0.790
Bra012913 Brassica rapa Bra012913 N 0.790
Bra031833 Brassica rapa Bra031833 N 0.790
Bo1g003550 Brassica oleracea Bo1g003550 N 0.790
Bo7g099150 Brassica oleracea Bo7g099150 N 0.790
OMERI07G17270 Oryza meridionalis OMERI07G17270 N 0.774
OMERI03G20600 Oryza meridionalis OMERI03G20600 N 0.774
ONIVA07G19050 Oryza nivara ONIVA07G19050 N 0.774
OPUNC03G21330 Oryza punctata OPUNC03G21330 N 0.774
e_gw1.19.226.1 Physcomitrella patens e_gw1.19.226.1 N 0.774
OLONG_015384 Oryza longistaminata OLONG_015384 N 0.774
OBART03G22820 Oryza barthii OBART03G22820 N 0.774
BGIOSGA026049 Oryza indica BGIOSGA026049 N 0.774
BGIOSGA010454 Oryza indica BGIOSGA010454 N 0.774
Gorai.007G056300 Gossypium raimondii Gorai.007G056300 N 0.774
ORGLA03G0213800 Oryza glaberrima ORGLA03G0213800 N 0.774
OBART07G20600 Oryza barthii OBART07G20600 N 0.774
OGLUM07G20380 Oryza glumaepatula OGLUM07G20380 N 0.774
ONIVA03G24370 Oryza nivara ONIVA03G24370 N 0.774
OS03G0445700 Oryza sativa OS03G0445700 N 0.774
ORUFI07G21460 Oryza rufipogon ORUFI07G21460 N 0.774
ORUFI03G23490 Oryza rufipogon ORUFI03G23490 N 0.774
ORGLA07G0157700 Oryza glaberrima ORGLA07G0157700 N 0.774
OS07G0589000 Oryza sativa OS07G0589000 N 0.774
Pm021281 Prunus mume Pm021281 N 0.758
Ciclev10029274m.g Citrus clementina Ciclev10029274m.g N 0.758
Traes_4BL_D44ACD58E Triticum aestivum Traes_4BL_D44ACD58E N 0.750
GSMUA_Achr6G07770_001 Musa acuminata GSMUA_Achr6G07770_001 N 0.742
gene25541-v1.0-hybrid Fragaria vesca gene25541-v1.0-hybrid N 0.742
Bra017831 Brassica rapa Bra017831 N 0.742
chr1.CM0088.550.nd Lotus japonicus chr1.CM0088.550.nd N 0.742
TCM_007211 Theobroma cacao TCM_007211 N 0.742
MLOC_11838 Hordeum vulgare MLOC_11838 N 0.742
cassava22449.valid.m1 Manihot esculenta cassava22449.valid.m1 N 0.742
mgf007319m Mimulus guttatus mgf007319m N 0.742
Bo9g018500 Brassica oleracea Bo9g018500 N 0.726
POPTR_0014s01770 Populus trichocarpa POPTR_0014s01770 N 0.726
Gorai.005G232500 Gossypium raimondii Gorai.005G232500 N 0.726
VIT_18s0001g09250 Vitis vinifera VIT_18s0001g09250 N 0.726
MDP0000139025 Malus domestica MDP0000139025 N 0.726
POPTR_0002s12020 Populus trichocarpa POPTR_0002s12020 N 0.726
POPTR_0009s09270 Populus trichocarpa POPTR_0009s09270 N 0.726
PRUPE_ppa014964mg Prunus persica PRUPE_ppa014964mg N 0.726
evm.TU.supercontig_21.100 Carica papaya evm.TU.supercontig_21.100 N 0.726
Pm005389 Prunus mume Pm005389 N 0.726
Traes_2BS_5DF7F4FEE Triticum aestivum Traes_2BS_5DF7F4FEE N 0.726
SELMODRAFT_37532 Selaginella moellendorffii SELMODRAFT_37532 N 0.726
SapurV1A.0845s0090 Salix purpurea SapurV1A.0845s0090 N 0.710
SapurV1A.2860s0030 Salix purpurea SapurV1A.2860s0030 N 0.710
GRMZM2G177110 Zea mays GRMZM2G177110 N 0.710
MLOC_58304 Hordeum vulgare MLOC_58304 N 0.710
Traes_2AL_450404EA6 Triticum aestivum Traes_2AL_450404EA6 N 0.710
Traes_2AS_942884399 Triticum aestivum Traes_2AS_942884399 N 0.710
Cla020920 Citrullus lanatus Cla020920 N 0.710
Traes_2DL_9D8B5B436 Triticum aestivum Traes_2DL_9D8B5B436 N 0.710
GLYMA20G26910 Glycine max GLYMA20G26910 N 0.710
Traes_2BL_3A840DB921 Triticum aestivum Traes_2BL_3A840DB921 N 0.710
gene02557-v1.0-hybrid Fragaria vesca gene02557-v1.0-hybrid N 0.710
estExt_gwp_gw1.C_2030014 Physcomitrella patens estExt_gwp_gw1.C_2030014 N 0.710