Pm018585 (Prunus mume)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Pm018585 T246382_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD4
M02261_2.00 		Arabidopsis thaliana
VDNVCGSNNN
NNNSCGBNHB		 PBM
Weirauch et al.(2014)
pTH7515 		0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm018585 LOB 74 172

Links

Other LOB family TFs
Other Prunus mume TFs

236 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.990
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.929
GLYMA20G31780 Glycine max GLYMA20G31780 I 0.929
CM1887.100.nc Lotus japonicus CM1887.100.nc I 0.929
MDP0000879799 Malus domestica MDP0000879799 N 0.929
TCM_043081 Theobroma cacao TCM_043081 I 0.919
MDP0000151784 Malus domestica MDP0000151784 I 0.919
MDP0000123013 Malus domestica MDP0000123013 I 0.919
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I 0.919
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.919
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.919
Eucgr.B02465 Eucalyptus grandis Eucgr.B02465 I 0.919
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I 0.919
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.919
PK27389.1 Cannabis sativa PK27389.1 I 0.909
TCM_041094 Theobroma cacao TCM_041094 I 0.909
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.909
Gorai.001G129700 Gossypium raimondii Gorai.001G129700 I 0.909
MDP0000822986 Malus domestica MDP0000822986 I 0.909
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.909
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.909
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.909
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.909
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.909
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.909
Ca_04287 Cicer arietinum Ca_04287 I 0.909
30111.m000703 Ricinus communis 30111.m000703 I 0.909
PK23777.1 Cannabis sativa PK23777.1 I 0.899
GSMUA_Achr10G22970_001 Musa acuminata GSMUA_Achr10G22970_001 I 0.899
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.899
Cla020379 Citrullus lanatus Cla020379 I 0.899
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.899
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.899
GSMUA_Achr7G15500_001 Musa acuminata GSMUA_Achr7G15500_001 I 0.899
MTR_2g093310 Medicago truncatula MTR_2g093310 I 0.899
Pm000938 Prunus mume Pm000938 I 0.889
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.889
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.889
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I 0.889
MDP0000218986 Malus domestica MDP0000218986 I 0.889
gene25294-v1.0-hybrid Fragaria vesca gene25294-v1.0-hybrid I 0.889
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.889
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.889
Eucgr.J01123 Eucalyptus grandis Eucgr.J01123 I 0.889
Ca_14605 Cicer arietinum Ca_14605 I 0.889
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.889
Cla005134 Citrullus lanatus Cla005134 N 0.889
MDP0000319331 Malus domestica MDP0000319331 I 0.889
MDP0000318244 Malus domestica MDP0000318244 I 0.889
GLYMA13G40370 Glycine max GLYMA13G40370 I 0.889
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.889
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.889
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.889
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.879
Solyc11g072470.1 Solanum lycopersicum Solyc11g072470.1 I 0.879
Cla000556 Citrullus lanatus Cla000556 I 0.879
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.879
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.879
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.879
evm.TU.contig_40341.1 Carica papaya evm.TU.contig_40341.1 I 0.872
evm.TU.supercontig_53.26 Carica papaya evm.TU.supercontig_53.26 N 0.869
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.869
mgf022524m Mimulus guttatus mgf022524m N 0.869
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N 0.869
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.869
AMTR_s00080p00153120 Amborella trichopoda AMTR_s00080p00153120 N 0.859
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.859
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.859
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I 0.859
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.859
Cagra.9128s0007 Capsella grandiflora Cagra.9128s0007 N 0.859
Bostr.25219s0157 Boechera stricta Bostr.25219s0157 N 0.859
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.859
Bo01039s010 Brassica oleracea Bo01039s010 N 0.859
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.859
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N 0.859
Carubv10023989m.g Capsella rubella Carubv10023989m.g N 0.859
Cucsa.207400 Cucumis sativus Cucsa.207400 N 0.848
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.848
Bra035698 Brassica rapa Bra035698 N 0.848
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.848
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.848
Ca_02507 Cicer arietinum Ca_02507 N 0.848
OB05G11740 Oryza brachyantha OB05G11740 I 0.848
Bra018675 Brassica rapa Bra018675 N 0.848
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N 0.848
mgf015666m Mimulus guttatus mgf015666m N 0.848
LBD11 Arabidopsis thaliana AT2G28500 N 0.848
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.848
Bo4g165420 Brassica oleracea Bo4g165420 N 0.848
Bra011942 Brassica rapa Bra011942 N 0.848
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.848
Bo5g008590 Brassica oleracea Bo5g008590 N 0.848
Cagra.1671s0410 Capsella grandiflora Cagra.1671s0410 N 0.848
GRMZM2G165805 Zea mays GRMZM2G165805 N 0.848
Solyc06g075330.1 Solanum lycopersicum Solyc06g075330.1 N 0.841
ORGLA05G0016500 Oryza glaberrima ORGLA05G0016500 N 0.838
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.838
VIT_13s0019g03750 Vitis vinifera VIT_13s0019g03750 N 0.838
Pavir.Ca00718 Panicum virgatum Pavir.Ca00718 I 0.838
GSMUA_Achr8G09700_001 Musa acuminata GSMUA_Achr8G09700_001 N 0.838
Pavir.J04684 Panicum virgatum Pavir.J04684 I 0.838
PGSC0003DMG400004138 Solanum tuberosum PGSC0003DMG400004138 N 0.838
PDK_20s1376911g004 Phoenix dactylifera PDK_20s1376911g004 I 0.833
cassava16668.m1 Manihot esculenta cassava16668.m1 N 0.830
Gorai.012G185900 Gossypium raimondii Gorai.012G185900 N 0.830
OGLUM03G13350 Oryza glumaepatula OGLUM03G13350 N 0.828
OPUNC03G12790 Oryza punctata OPUNC03G12790 N 0.828
Bra000491 Brassica rapa Bra000491 N 0.828
OBART03G13260 Oryza barthii OBART03G13260 N 0.828
Bo8g112780 Brassica oleracea Bo8g112780 N 0.828
BGIOSGA038947 Oryza indica BGIOSGA038947 N 0.828
BGIOSGA010952 Oryza indica BGIOSGA010952 N 0.828
Bo3g040220 Brassica oleracea Bo3g040220 N 0.828
OMERI03G12370 Oryza meridionalis OMERI03G12370 N 0.828
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.828
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.828
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.828
Sb01g038650 Sorghum bicolor Sb01g038650 N 0.828
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I 0.828
ONIVA03G14510 Oryza nivara ONIVA03G14510 N 0.828
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.828
ORUFI03G13900 Oryza rufipogon ORUFI03G13900 N 0.828
GRMZM2G021095 Zea mays GRMZM2G021095 N 0.828
OS03G0287400 Oryza sativa OS03G0287400 N 0.828
ORGLA03G0128100 Oryza glaberrima ORGLA03G0128100 N 0.828
Pavir.Ia03612 Panicum virgatum Pavir.Ia03612 N 0.828
OBART05G01640 Oryza barthii OBART05G01640 N 0.827
OPUNC05G01610 Oryza punctata OPUNC05G01610 N 0.824
PK17019.1 Cannabis sativa PK17019.1 I 0.824
GRMZM2G145568 Zea mays GRMZM2G145568 N 0.818
VIT_13s0019g03710 Vitis vinifera VIT_13s0019g03710 N 0.818
Bra031599 Brassica rapa Bra031599 N 0.818
Si024430m.g Setaria italica Si024430m.g N 0.818
Cla005133 Citrullus lanatus Cla005133 N 0.808
OB03G23270 Oryza brachyantha OB03G23270 N 0.808
mgf019622m Mimulus guttatus mgf019622m N 0.808
VIT_13s0019g03800 Vitis vinifera VIT_13s0019g03800 N 0.805
evm.TU.contig_40341.2 Carica papaya evm.TU.contig_40341.2 N 0.804
Eucgr.E02410 Eucalyptus grandis Eucgr.E02410 N 0.800
Ciclev10032772m.g Citrus clementina Ciclev10032772m.g I 0.798
Traes_4BL_97EDABD02 Triticum aestivum Traes_4BL_97EDABD02 N 0.798
orange1.1g045080m.g Citrus sinensis orange1.1g045080m.g I 0.798
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.798
F775_02335 Aegilops tauschii F775_02335 N 0.798
Si037280m.g Setaria italica Si037280m.g N 0.798
VIT_13s0019g03760 Vitis vinifera VIT_13s0019g03760 N 0.788
Traes_1AS_26CB95294 Triticum aestivum Traes_1AS_26CB95294 N 0.788
LPERR03G11720 Leersia perrieri LPERR03G11720 N 0.788
MLOC_68570 Hordeum vulgare MLOC_68570 N 0.788
Traes_1BS_CE38938A8 Triticum aestivum Traes_1BS_CE38938A8 N 0.788
Traes_1DS_A31FB6CB2 Triticum aestivum Traes_1DS_A31FB6CB2 N 0.788
GSMUA_Achr3G17800_001 Musa acuminata GSMUA_Achr3G17800_001 N 0.778
BRADI1G65760 Brachypodium distachyon BRADI1G65760 N 0.778
Traes_4AS_669BAF6C7 Triticum aestivum Traes_4AS_669BAF6C7 N 0.778
VIT_13s0019g03720 Vitis vinifera VIT_13s0019g03720 N 0.778
Cucsa.358620 Cucumis sativus Cucsa.358620 N 0.773
BGIOSGA018905 Oryza indica BGIOSGA018905 I 0.772
ORUFI05G01750 Oryza rufipogon ORUFI05G01750 I 0.772
OS05G0123000 Oryza sativa OS05G0123000 I 0.772
GSMUA_Achr4G16790_001 Musa acuminata GSMUA_Achr4G16790_001 N 0.768
VIT_13s0019g03820 Vitis vinifera VIT_13s0019g03820 N 0.768
VIT_13s0019g03780 Vitis vinifera VIT_13s0019g03780 N 0.758
VIT_13s0019g03840 Vitis vinifera VIT_13s0019g03840 N 0.758
Cucsa.207390 Cucumis sativus Cucsa.207390 N 0.758
VIT_13s0019g03830 Vitis vinifera VIT_13s0019g03830 N 0.747
OPUNC05G01600 Oryza punctata OPUNC05G01600 N 0.746
VIT_13s0019g03810 Vitis vinifera VIT_13s0019g03810 N 0.737
PGSC0003DMG400025384 Solanum tuberosum PGSC0003DMG400025384 N 0.737
OMERI05G01730 Oryza meridionalis OMERI05G01730 N 0.733
Cucsa.011680 Cucumis sativus Cucsa.011680 N 0.733
ONIVA05G01850 Oryza nivara ONIVA05G01850 I 0.727
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.727
Cucsa.239660 Cucumis sativus Cucsa.239660 I 0.727
GRMZM2G447176 Zea mays GRMZM2G447176 I 0.727
MDP0000183071 Malus domestica MDP0000183071 N 0.725
GRMZM2G079185 Zea mays GRMZM2G079185 I 0.717
Si037583m.g Setaria italica Si037583m.g I 0.717
Lus10031191.g Linum usitatissimum Lus10031191.g I 0.717
orange1.1g044340m.g Citrus sinensis orange1.1g044340m.g I 0.717
PK24688.1 Cannabis sativa PK24688.1 I 0.717
GSMUA_Achr9G04330_001 Musa acuminata GSMUA_Achr9G04330_001 N 0.717
Cla005598 Citrullus lanatus Cla005598 I 0.717
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I 0.717
SapurV1A.0284s0080 Salix purpurea SapurV1A.0284s0080 I 0.717
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I 0.717
Sb01g012810 Sorghum bicolor Sb01g012810 I 0.717
Ciclev10006113m.g Citrus clementina Ciclev10006113m.g I 0.717
Cucsa.275710 Cucumis sativus Cucsa.275710 N 0.717
cassava41200.m1 Manihot esculenta cassava41200.m1 N 0.717
POPTR_0005s10050 Populus trichocarpa POPTR_0005s10050 I 0.712
cassava4159.m1 Manihot esculenta cassava4159.m1 N 0.712
Cucsa.118370 Cucumis sativus Cucsa.118370 I 0.707
ONIVA03G29300 Oryza nivara ONIVA03G29300 I 0.707
Pm011040 Prunus mume Pm011040 I 0.707
OMERI03G24920 Oryza meridionalis OMERI03G24920 I 0.707
OPUNC03G25820 Oryza punctata OPUNC03G25820 I 0.707
LBD4 Arabidopsis thaliana AT1G31320 D 0.707
ORUFI03G29410 Oryza rufipogon ORUFI03G29410 I 0.707
evm.TU.supercontig_192.6 Carica papaya evm.TU.supercontig_192.6 I 0.707
mgf018189m Mimulus guttatus mgf018189m I 0.707
mgf026046m Mimulus guttatus mgf026046m I 0.707
Bostr.15697s0446 Boechera stricta Bostr.15697s0446 I 0.707
Gorai.002G104500 Gossypium raimondii Gorai.002G104500 I 0.707
Cagra.1508s0061 Capsella grandiflora Cagra.1508s0061 I 0.707
LBD4 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002773 I 0.707
Aquca_118_00035 Aquilegia coerulea Aquca_118_00035 I 0.707
PK11564.1 Cannabis sativa PK11564.1 I 0.707
OGLUM04G05130 Oryza glumaepatula OGLUM04G05130 I 0.707
Thhalv10008917m.g Eutrema salsugineum Thhalv10008917m.g I 0.707
MTR_2g068760 Medicago truncatula MTR_2g068760 I 0.707
PGSC0003DMG400008649 Solanum tuberosum PGSC0003DMG400008649 I 0.707
30169.m006340 Ricinus communis 30169.m006340 I 0.707
cassava27818.m1 Manihot esculenta cassava27818.m1 I 0.707
Lus10031769.g Linum usitatissimum Lus10031769.g I 0.707
Solyc06g082310.2 Solanum lycopersicum Solyc06g082310.2 I 0.707
cassava30732.valid.m1 Manihot esculenta cassava30732.valid.m1 I 0.707
Solyc11g045530.1 Solanum lycopersicum Solyc11g045530.1 I 0.707
TCM_032557 Theobroma cacao TCM_032557 I 0.707
gene30046-v1.0-hybrid Fragaria vesca gene30046-v1.0-hybrid I 0.707
Ca_13575 Cicer arietinum Ca_13575 I 0.707
LBD3 Vitis vinifera VIT_19s0027g01120 I 0.707
MDP0000121203 Malus domestica MDP0000121203 I 0.707
Carubv10010462m.g Capsella rubella Carubv10010462m.g I 0.707
PRUPE_ppa012253mg Prunus persica PRUPE_ppa012253mg I 0.707
POPTR_0007s08290 Populus trichocarpa POPTR_0007s08290 I 0.707
PGSC0003DMG400030456 Solanum tuberosum PGSC0003DMG400030456 I 0.707
BGIOSGA013249 Oryza indica BGIOSGA013249 I 0.707
MDP0000284409 Malus domestica MDP0000284409 I 0.707
MDP0000268890 Malus domestica MDP0000268890 I 0.707
PRUPE_ppa012504mg Prunus persica PRUPE_ppa012504mg I 0.707
gene20083-v1.0-hybrid Fragaria vesca gene20083-v1.0-hybrid I 0.707
PRUPE_ppa012322mg Prunus persica PRUPE_ppa012322mg I 0.707
Cla013678 Citrullus lanatus Cla013678 I 0.707
evm.TU.supercontig_331.6 Carica papaya evm.TU.supercontig_331.6 I 0.702
OS03G0659700 Oryza sativa OS03G0659700 I 0.702