30143.m001171 (Ricinus communis)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 30143.m001171 T246425_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
30143.m001171 LOB 7 106

Links

Other LOB family TFs
Other Ricinus communis TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0010s20800 Populus trichocarpa POPTR_0010s20800 I 0.909
evm.TU.supercontig_1.438 Carica papaya evm.TU.supercontig_1.438 I 0.899
Eucgr.G02955 Eucalyptus grandis Eucgr.G02955 I 0.889
MDP0000133936 Malus domestica MDP0000133936 N 0.889
cassava34632.m1 Manihot esculenta cassava34632.m1 N 0.889
SapurV1A.0281s0190 Salix purpurea SapurV1A.0281s0190 I 0.879
PRUPE_ppa018815mg Prunus persica PRUPE_ppa018815mg N 0.869
LBD33 Vitis vinifera VIT_13s0019g02060 N 0.869
Pm018835 Prunus mume Pm018835 N 0.869
gene26330-v1.0-hybrid Fragaria vesca gene26330-v1.0-hybrid N 0.869
MDP0000123797 Malus domestica MDP0000123797 N 0.869
TCM_042730 Theobroma cacao TCM_042730 I 0.859
GLYMA02G41710 Glycine max GLYMA02G41710 N 0.848
GLYMA14G07260 Glycine max GLYMA14G07260 N 0.848
Ciclev10033354m.g Citrus clementina Ciclev10033354m.g I 0.848
Ca_16122 Cicer arietinum Ca_16122 N 0.838
MTR_5g080470 Medicago truncatula MTR_5g080470 N 0.828
Gorai.011G267700 Gossypium raimondii Gorai.011G267700 I 0.818
cassava15468.m1 Manihot esculenta cassava15468.m1 I 0.808
Cagra.2117s0054 Capsella grandiflora Cagra.2117s0054 N 0.788
Carubv10002921m.g Capsella rubella Carubv10002921m.g N 0.788
LBD33 Arabidopsis lyrata Al_scaffold_0006_527 N 0.778
LBD33 Arabidopsis thaliana AT5G06080 N 0.768
Bostr.13129s0366 Boechera stricta Bostr.13129s0366 N 0.768
Cucsa.165150 Cucumis sativus Cucsa.165150 N 0.768
Lus10004707.g Linum usitatissimum Lus10004707.g N 0.758
Bra009161 Brassica rapa Bra009161 N 0.758
Bo9g176580 Brassica oleracea Bo9g176580 N 0.758
Cla004059 Citrullus lanatus Cla004059 N 0.758
LjSGA_002536.2 Lotus japonicus LjSGA_002536.2 I 0.747
LjSGA_054888.1 Lotus japonicus LjSGA_054888.1 I 0.747
mgf020558m Mimulus guttatus mgf020558m N 0.737
Pm017936 Prunus mume Pm017936 I 0.717
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I 0.717
Cla007068 Citrullus lanatus Cla007068 I 0.717
Aquca_009_00560 Aquilegia coerulea Aquca_009_00560 I 0.717
Cucsa.362840 Cucumis sativus Cucsa.362840 I 0.717
MLOC_55239 Hordeum vulgare MLOC_55239 I 0.707
orange1.1g042813m.g Citrus sinensis orange1.1g042813m.g I 0.707
Thhalv10015772m.g Eutrema salsugineum Thhalv10015772m.g N 0.707
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I 0.707
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I 0.707
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I 0.707
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I 0.707
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I 0.707
LBD20 Vitis vinifera VIT_08s0056g01650 I 0.707
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I 0.707
Ciclev10021843m.g Citrus clementina Ciclev10021843m.g I 0.707
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I 0.707
Gorai.008G114400 Gossypium raimondii Gorai.008G114400 I 0.707
30174.m008898 Ricinus communis 30174.m008898 I 0.707
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I 0.707
PGSC0003DMG400022454 Solanum tuberosum PGSC0003DMG400022454 I 0.707