cassava3724.m1 (Manihot esculenta)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 cassava3724.m1 T246473_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LOB
M06966_2.00 		Arabidopsis thaliana
NVCGGCGGHRRHDRMGGMGGH
DCCKCCKYHDYYDCCGCCGBN		 Dap-seq
OMalley et al.(2016)
LOB_col_a 		0.828 0.828
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava3724.m1 LOB 5 103

Links

Other LOB family TFs
Other Manihot esculenta TFs

Invalid Input OrderBy

145 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action