Cucsa.031350 (Cucumis sativus)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Cucsa.031350 T246492_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.031350.1 LOB 66 168

Links

Other LOB family TFs
Other Cucumis sativus TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr4G13790_001 Musa acuminata GSMUA_Achr4G13790_001 N 1.000
Cla007208 Citrullus lanatus Cla007208 N 1.000
AMTR_s00079p00088960 Amborella trichopoda AMTR_s00079p00088960 N 1.000
GSMUA_Achr3G29520_001 Musa acuminata GSMUA_Achr3G29520_001 N 1.000
evm.TU.supercontig_282.15 Carica papaya evm.TU.supercontig_282.15 N 0.990
TCM_019459 Theobroma cacao TCM_019459 N 0.990
cassava6185.valid.m1 Manihot esculenta cassava6185.valid.m1 N 0.990
MTR_7g007010 Medicago truncatula MTR_7g007010 N 0.980
Aquca_026_00293 Aquilegia coerulea Aquca_026_00293 N 0.980
PRUPE_ppa009213mg Prunus persica PRUPE_ppa009213mg N 0.970
Gorai.008G056000 Gossypium raimondii Gorai.008G056000 N 0.970
cassava60.valid.m1 Manihot esculenta cassava60.valid.m1 N 0.969
GLYMA13G07590 Glycine max GLYMA13G07590 N 0.969
GLYMA08G48040 Glycine max GLYMA08G48040 N 0.969
POPTR_0005s15670 Populus trichocarpa POPTR_0005s15670 N 0.969
Ciclev10013705m.g Citrus clementina Ciclev10013705m.g N 0.969
orange1.1g022591m.g Citrus sinensis orange1.1g022591m.g N 0.969
chr1.LjT23D08.90.nc Lotus japonicus chr1.LjT23D08.90.nc N 0.960
GSMUA_Achr4G06820_001 Musa acuminata GSMUA_Achr4G06820_001 N 0.959
GLYMA18G53440 Glycine max GLYMA18G53440 N 0.959
GLYMA19G06280 Glycine max GLYMA19G06280 N 0.959
POPTR_0004s09920 Populus trichocarpa POPTR_0004s09920 N 0.959
GSMUA_Achr4G03700_001 Musa acuminata GSMUA_Achr4G03700_001 N 0.959
PK03169.1 Cannabis sativa PK03169.1 N 0.959
SapurV1A.0315s0090 Salix purpurea SapurV1A.0315s0090 N 0.959
MDP0000136037 Malus domestica MDP0000136037 N 0.959
Eucgr.J01501 Eucalyptus grandis Eucgr.J01501 N 0.959
GSMUA_Achr9G21360_001 Musa acuminata GSMUA_Achr9G21360_001 N 0.949
PGSC0003DMG400012653 Solanum tuberosum PGSC0003DMG400012653 N 0.949
gene10300-v1.0-hybrid Fragaria vesca gene10300-v1.0-hybrid N 0.949
Solyc02g085910.2 Solanum lycopersicum Solyc02g085910.2 N 0.949
GSMUA_AchrUn_randomG00460_001 Musa acuminata GSMUA_AchrUn_randomG00460_001 N 0.949
Lus10028470.g Linum usitatissimum Lus10028470.g N 0.929
mgf011656m Mimulus guttatus mgf011656m N 0.929
VIT_14s0006g02950 Vitis vinifera VIT_14s0006g02950 N 0.929
Thhalv10021328m.g Eutrema salsugineum Thhalv10021328m.g N 0.929
Carubv10021721m.g Capsella rubella Carubv10021721m.g N 0.929
Carubv10002654m.g Capsella rubella Carubv10002654m.g N 0.929
Bo3g055690 Brassica oleracea Bo3g055690 N 0.929
LBD40 Arabidopsis thaliana AT1G67100 N 0.929
Bra021433 Brassica rapa Bra021433 N 0.929
Cagra.6164s0006 Capsella grandiflora Cagra.6164s0006 N 0.929
mgf010898m Mimulus guttatus mgf010898m N 0.929
Thhalv10019048m.g Eutrema salsugineum Thhalv10019048m.g N 0.919
Carubv10015363m.g Capsella rubella Carubv10015363m.g N 0.919
Cagra.1194s0049 Capsella grandiflora Cagra.1194s0049 N 0.919
Bostr.1460s0172 Boechera stricta Bostr.1460s0172 N 0.919
Carubv10000015m.g Capsella rubella Carubv10000015m.g N 0.918
LBD41 Arabidopsis thaliana AT3G02550 N 0.918
LBD40 Arabidopsis lyrata Al_scaffold_0002_1337 N 0.918
GSMUA_Achr9G00580_001 Musa acuminata GSMUA_Achr9G00580_001 N 0.918
Bo1g156310 Brassica oleracea Bo1g156310 N 0.918
LBD41 Arabidopsis lyrata fgenesh2_kg.3__191__AT3G02550.1 N 0.918
Bostr.26959s0198 Boechera stricta Bostr.26959s0198 N 0.909
ORUFI01G19440 Oryza rufipogon ORUFI01G19440 N 0.908
Bostr.2902s0344 Boechera stricta Bostr.2902s0344 N 0.908
OS01G0511000 Oryza sativa OS01G0511000 N 0.908
Traes_2AL_450404EA6 Triticum aestivum Traes_2AL_450404EA6 N 0.908
Traes_2DL_9D8B5B436 Triticum aestivum Traes_2DL_9D8B5B436 N 0.908
Traes_2BL_3A840DB921 Triticum aestivum Traes_2BL_3A840DB921 N 0.908
MTR_6g018270 Medicago truncatula MTR_6g018270 N 0.908
MLOC_58304 Hordeum vulgare MLOC_58304 N 0.908
OBART01G17510 Oryza barthii OBART01G17510 N 0.908
OPUNC01G18000 Oryza punctata OPUNC01G18000 N 0.908
Cucsa.199060 Cucumis sativus Cucsa.199060 N 0.908
BGIOSGA001546 Oryza indica BGIOSGA001546 N 0.908
OGLUM01G20320 Oryza glumaepatula OGLUM01G20320 N 0.908
Cla019264 Citrullus lanatus Cla019264 N 0.908
ONIVA01G19320 Oryza nivara ONIVA01G19320 N 0.908
OMERI01G16320 Oryza meridionalis OMERI01G16320 N 0.908
Cagra.6845s0054 Capsella grandiflora Cagra.6845s0054 N 0.899
Bo2g055410 Brassica oleracea Bo2g055410 N 0.899
LPERR01G15290 Leersia perrieri LPERR01G15290 N 0.898
Ca_22996 Cicer arietinum Ca_22996 N 0.879
VIT_01s0011g03540 Vitis vinifera VIT_01s0011g03540 N 0.878
evm.TU.supercontig_3.514 Carica papaya evm.TU.supercontig_3.514 N 0.878
Eucgr.F02492 Eucalyptus grandis Eucgr.F02492 N 0.878
SapurV1A.0851s0010 Salix purpurea SapurV1A.0851s0010 N 0.878
VIT_17s0000g03720 Vitis vinifera VIT_17s0000g03720 N 0.878
Ciclev10022068m.g Citrus clementina Ciclev10022068m.g N 0.867
Pavir.Ea01295 Panicum virgatum Pavir.Ea01295 N 0.867
orange1.1g038007m.g Citrus sinensis orange1.1g038007m.g N 0.867
Solyc03g119530.2 Solanum lycopersicum Solyc03g119530.2 N 0.867
TCM_009888 Theobroma cacao TCM_009888 N 0.867
GRMZM2G060544 Zea mays GRMZM2G060544 N 0.867
PGSC0003DMG400014547 Solanum tuberosum PGSC0003DMG400014547 N 0.867
GSMUA_Achr1G20970_001 Musa acuminata GSMUA_Achr1G20970_001 N 0.867
PGSC0003DMG400005719 Solanum tuberosum PGSC0003DMG400005719 N 0.867
BRADI4G16740 Brachypodium distachyon BRADI4G16740 N 0.859
BRADI4G16750 Brachypodium distachyon BRADI4G16750 N 0.859
Solyc05g009320.2 Solanum lycopersicum Solyc05g009320.2 N 0.857
Sb01g032580 Sorghum bicolor Sb01g032580 N 0.857
OMERI01G01380 Oryza meridionalis OMERI01G01380 N 0.857
POPTR_0008s11950 Populus trichocarpa POPTR_0008s11950 N 0.857
cassava38982.m1 Manihot esculenta cassava38982.m1 N 0.847
28207.m000107 Ricinus communis 28207.m000107 N 0.847
ORGLA01G0016600 Oryza glaberrima ORGLA01G0016600 N 0.847
OB01G11830 Oryza brachyantha OB01G11830 N 0.847
OGLUM01G02100 Oryza glumaepatula OGLUM01G02100 N 0.847
ONIVA01G02110 Oryza nivara ONIVA01G02110 N 0.847
LPERR01G01830 Leersia perrieri LPERR01G01830 N 0.847
GSMUA_Achr2G14600_001 Musa acuminata GSMUA_Achr2G14600_001 N 0.847
LjSGA_023437.1 Lotus japonicus LjSGA_023437.1 N 0.847
BGIOSGA002703 Oryza indica BGIOSGA002703 N 0.847
Eucgr.G02321 Eucalyptus grandis Eucgr.G02321 N 0.847
OPUNC01G01670 Oryza punctata OPUNC01G01670 N 0.847
OBART01G01940 Oryza barthii OBART01G01940 N 0.847
ORUFI01G02010 Oryza rufipogon ORUFI01G02010 N 0.847
Si022660m.g Setaria italica Si022660m.g N 0.847
Sb03g007270 Sorghum bicolor Sb03g007270 N 0.847
Pavir.J11724 Panicum virgatum Pavir.J11724 N 0.847
Pavir.Eb02390 Panicum virgatum Pavir.Eb02390 N 0.838
GRMZM2G132693 Zea mays GRMZM2G132693 N 0.837
cassava43296.valid.m1 Manihot esculenta cassava43296.valid.m1 N 0.837
Pavir.J01483 Panicum virgatum Pavir.J01483 N 0.827
Gorai.002G217800 Gossypium raimondii Gorai.002G217800 N 0.827
Gorai.005G190300 Gossypium raimondii Gorai.005G190300 N 0.827
Pm029059 Prunus mume Pm029059 N 0.827
POPTR_0012s05340 Populus trichocarpa POPTR_0012s05340 N 0.827
TCM_012338 Theobroma cacao TCM_012338 N 0.827
PRUPE_ppa011233mg Prunus persica PRUPE_ppa011233mg N 0.827
gene03741-v1.0-hybrid Fragaria vesca gene03741-v1.0-hybrid N 0.827
Sb09g030780 Sorghum bicolor Sb09g030780 N 0.827
Bostr.26959s0040 Boechera stricta Bostr.26959s0040 N 0.816
SapurV1A.0079s0150 Salix purpurea SapurV1A.0079s0150 N 0.816
Pavir.J00526 Panicum virgatum Pavir.J00526 N 0.816
Si002412m.g Setaria italica Si002412m.g N 0.816
SapurV1A.0078s0410 Salix purpurea SapurV1A.0078s0410 N 0.816
GRMZM2G386674 Zea mays GRMZM2G386674 N 0.816
Pavir.Ea00650 Panicum virgatum Pavir.Ea00650 N 0.816
Thhalv10019494m.g Eutrema salsugineum Thhalv10019494m.g N 0.816
POPTR_0010s13480 Populus trichocarpa POPTR_0010s13480 N 0.816
PK04625.1 Cannabis sativa PK04625.1 N 0.814
TRAES3BF008500030CFD_g Triticum aestivum TRAES3BF008500030CFD_g N 0.806
MDP0000233303 Malus domestica MDP0000233303 N 0.806
TRAES3BF008600030CFD_g Triticum aestivum TRAES3BF008600030CFD_g N 0.806
Eucgr.K02222 Eucalyptus grandis Eucgr.K02222 N 0.806
mgf017960m Mimulus guttatus mgf017960m N 0.806
LBD42 Arabidopsis thaliana AT1G68510 N 0.806
LBD42 Arabidopsis lyrata fgenesh2_kg.2__1100__AT1G68510.1 N 0.806
27524.m000293 Ricinus communis 27524.m000293 N 0.806
Bra004315 Brassica rapa Bra004315 N 0.804
Ciclev10016422m.g Citrus clementina Ciclev10016422m.g N 0.798
orange1.1g045357m.g Citrus sinensis orange1.1g045357m.g N 0.796
PK04548.1 Cannabis sativa PK04548.1 N 0.796
Cagra.3364s0006 Capsella grandiflora Cagra.3364s0006 N 0.796
Carubv10022391m.g Capsella rubella Carubv10022391m.g N 0.796
Bo6g106960 Brassica oleracea Bo6g106960 N 0.794
Cucsa.283560 Cucumis sativus Cucsa.283560 N 0.786
GRMZM2G073044 Zea mays GRMZM2G073044 N 0.786
VIT_01s0011g03530 Vitis vinifera VIT_01s0011g03530 N 0.786
Cla020705 Citrullus lanatus Cla020705 N 0.786
evm.TU.supercontig_1.42 Carica papaya evm.TU.supercontig_1.42 N 0.786
PK25954.1 Cannabis sativa PK25954.1 N 0.783
Eucgr.B03016 Eucalyptus grandis Eucgr.B03016 N 0.776
Sb09g025710 Sorghum bicolor Sb09g025710 N 0.773
OB01G27020 Oryza brachyantha OB01G27020 N 0.765
Gorai.006G061200 Gossypium raimondii Gorai.006G061200 N 0.765
SELMODRAFT_105005 Selaginella moellendorffii SELMODRAFT_105005 N 0.755
SELMODRAFT_27399 Selaginella moellendorffii SELMODRAFT_27399 N 0.755
GLYMA20G24950 Glycine max GLYMA20G24950 N 0.747
AC234149.1_FG002 Zea mays AC234149.1_FG002 N 0.745
mgf021653m Mimulus guttatus mgf021653m N 0.736
orange1.1g026365m.g Citrus sinensis orange1.1g026365m.g N 0.735
Sb09g025700 Sorghum bicolor Sb09g025700 N 0.735
Ciclev10026374m.g Citrus clementina Ciclev10026374m.g N 0.735
GLYMA08G31143 Glycine max GLYMA08G31143 N 0.735
e_gw1.19.226.1 Physcomitrella patens e_gw1.19.226.1 N 0.724
gw1.167.132.1 Physcomitrella patens gw1.167.132.1 N 0.724
gw1.41.215.1 Physcomitrella patens gw1.41.215.1 N 0.724
Traes_4DL_E0847FBC5 Triticum aestivum Traes_4DL_E0847FBC5 N 0.724
Lus10019292.g Linum usitatissimum Lus10019292.g N 0.724
Lus10011530.g Linum usitatissimum Lus10011530.g N 0.724
MDP0000446238 Malus domestica MDP0000446238 N 0.717
PK15647.1 Cannabis sativa PK15647.1 N 0.716
Gorai.007G222000 Gossypium raimondii Gorai.007G222000 N 0.714
VIT_07s0129g00330 Vitis vinifera VIT_07s0129g00330 N 0.714
TCM_000766 Theobroma cacao TCM_000766 N 0.714
Solyc02g092550.2 Solanum lycopersicum Solyc02g092550.2 N 0.714
Ca_05488 Cicer arietinum Ca_05488 N 0.714
29661.m000902 Ricinus communis 29661.m000902 N 0.714
cassava22449.valid.m1 Manihot esculenta cassava22449.valid.m1 N 0.714
SELMODRAFT_37566 Selaginella moellendorffii SELMODRAFT_37566 N 0.714
LBD38 Arabidopsis lyrata scaffold_502015.1 N 0.714
LBD38 Arabidopsis thaliana AT3G49940 N 0.714
AMTR_s00137p00087340 Amborella trichopoda AMTR_s00137p00087340 N 0.714
GSMUA_Achr2G22720_001 Musa acuminata GSMUA_Achr2G22720_001 N 0.714
GSMUA_Achr3G18860_001 Musa acuminata GSMUA_Achr3G18860_001 N 0.714
PGSC0003DMG400024936 Solanum tuberosum PGSC0003DMG400024936 N 0.714
cassava226.valid.m1 Manihot esculenta cassava226.valid.m1 N 0.714
SELMODRAFT_37570 Selaginella moellendorffii SELMODRAFT_37570 N 0.714
evm.TU.supercontig_6.40 Carica papaya evm.TU.supercontig_6.40 N 0.714
Cagra.4491s0014 Capsella grandiflora Cagra.4491s0014 N 0.714
Carubv10005616m.g Capsella rubella Carubv10005616m.g N 0.714
Eucgr.H02293 Eucalyptus grandis Eucgr.H02293 N 0.714
Cagra.10957s0002 Capsella grandiflora Cagra.10957s0002 N 0.714
cassava7497.valid.m1 Manihot esculenta cassava7497.valid.m1 N 0.714
Carubv10017944m.g Capsella rubella Carubv10017944m.g N 0.714
gene05722-v1.0-hybrid Fragaria vesca gene05722-v1.0-hybrid N 0.714
PK03977.1 Cannabis sativa PK03977.1 N 0.704
MTR_4g095600 Medicago truncatula MTR_4g095600 N 0.704
Bo1g003550 Brassica oleracea Bo1g003550 N 0.704
chr4.CM0128.270.nc Lotus japonicus chr4.CM0128.270.nc N 0.704
Thhalv10026086m.g Eutrema salsugineum Thhalv10026086m.g N 0.704
Bra011772 Brassica rapa Bra011772 N 0.704
evm.TU.supercontig_21.100 Carica papaya evm.TU.supercontig_21.100 N 0.704
POPTR_0005s18900 Populus trichocarpa POPTR_0005s18900 N 0.704
Gorai.007G056300 Gossypium raimondii Gorai.007G056300 N 0.704
Bostr.6864s0247 Boechera stricta Bostr.6864s0247 N 0.704
Aquca_042_00143 Aquilegia coerulea Aquca_042_00143 N 0.704
SapurV1A.0116s0210 Salix purpurea SapurV1A.0116s0210 N 0.704
SapurV1A.0476s0230 Salix purpurea SapurV1A.0476s0230 N 0.704
cassava35733.valid.m1 Manihot esculenta cassava35733.valid.m1 N 0.704
Thhalv10010666m.g Eutrema salsugineum Thhalv10010666m.g N 0.704
POPTR_0007s10010 Populus trichocarpa POPTR_0007s10010 N 0.704
POPTR_0002s12020 Populus trichocarpa POPTR_0002s12020 N 0.704