Cucsa.139480 (Cucumis sativus)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Cucsa.139480 T246503_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.139480.1 LOB 7 105

Links

Other LOB family TFs
Other Cucumis sativus TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla013598 Citrullus lanatus Cla013598 I 0.889
Ciclev10032929m.g Citrus clementina Ciclev10032929m.g I 0.828
orange1.1g036782m.g Citrus sinensis orange1.1g036782m.g I 0.828
evm.TU.supercontig_2.374 Carica papaya evm.TU.supercontig_2.374 I 0.828
Lus10031285.g Linum usitatissimum Lus10031285.g I 0.818
SapurV1A.0673s0190 Salix purpurea SapurV1A.0673s0190 I 0.808
Lus10031855.g Linum usitatissimum Lus10031855.g I 0.808
Pm018982 Prunus mume Pm018982 I 0.808
TCM_042447 Theobroma cacao TCM_042447 I 0.808
POPTR_0008s07280 Populus trichocarpa POPTR_0008s07280 I 0.808
Solyc06g082310.2 Solanum lycopersicum Solyc06g082310.2 I 0.808
cassava26200.m1 Manihot esculenta cassava26200.m1 I 0.808
PGSC0003DMG400030456 Solanum tuberosum PGSC0003DMG400030456 I 0.808
Gorai.010G195100 Gossypium raimondii Gorai.010G195100 I 0.808
Eucgr.J00175 Eucalyptus grandis Eucgr.J00175 I 0.808
PDK_20s1728161g001 Phoenix dactylifera PDK_20s1728161g001 I 0.808
Si024229m.g Setaria italica Si024229m.g I 0.798
POPTR_0001s28840 Populus trichocarpa POPTR_0001s28840 I 0.798
MDP0000265429 Malus domestica MDP0000265429 I 0.798
evm.TU.supercontig_19.133 Carica papaya evm.TU.supercontig_19.133 I 0.798
Sb09g016240 Sorghum bicolor Sb09g016240 I 0.798
PRUPE_ppa012504mg Prunus persica PRUPE_ppa012504mg I 0.798
Eucgr.B03991 Eucalyptus grandis Eucgr.B03991 I 0.798
POPTR_0009s08060 Populus trichocarpa POPTR_0009s08060 I 0.798
LBD12 Arabidopsis thaliana AT2G30130 I 0.798
Gorai.003G149600 Gossypium raimondii Gorai.003G149600 I 0.798
mgf018189m Mimulus guttatus mgf018189m I 0.798
29729.m002278 Ricinus communis 29729.m002278 I 0.798
cassava20865.m1 Manihot esculenta cassava20865.m1 I 0.798
Cla007354 Citrullus lanatus Cla007354 I 0.798
Ca_13388 Cicer arietinum Ca_13388 I 0.798
Cucsa.144430 Cucumis sativus Cucsa.144430 I 0.798
Carubv10025543m.g Capsella rubella Carubv10025543m.g I 0.798
Aquca_030_00227 Aquilegia coerulea Aquca_030_00227 I 0.798
MDP0000194766 Malus domestica MDP0000194766 I 0.798
POPTR_0010s19180 Populus trichocarpa POPTR_0010s19180 I 0.798
ASL5 Arabidopsis lyrata fgenesh2_kg.4__983__AT2G30130.1 I 0.798
Bra018335 Brassica rapa Bra018335 I 0.798
GSMUA_Achr9G18030_001 Musa acuminata GSMUA_Achr9G18030_001 I 0.798
Bo4g059700 Brassica oleracea Bo4g059700 I 0.798
Bo4g170770 Brassica oleracea Bo4g170770 I 0.798
MTR_3g071590 Medicago truncatula MTR_3g071590 I 0.798
SapurV1A.0042s0120 Salix purpurea SapurV1A.0042s0120 I 0.798
Bra021612 Brassica rapa Bra021612 I 0.798
SapurV1A.0566s0080 Salix purpurea SapurV1A.0566s0080 I 0.798
Solyc06g050950.2 Solanum lycopersicum Solyc06g050950.2 I 0.788
Ciclev10029962m.g Citrus clementina Ciclev10029962m.g I 0.788
LPERR05G10020 Leersia perrieri LPERR05G10020 I 0.788
PDK_20s1810211g001 Phoenix dactylifera PDK_20s1810211g001 I 0.788
SapurV1A.0061s0670 Salix purpurea SapurV1A.0061s0670 I 0.788
GLYMA02G43030 Glycine max GLYMA02G43030 I 0.788
GRMZM2G044150 Zea mays GRMZM2G044150 I 0.788
VIT_13s0067g01880 Vitis vinifera VIT_13s0067g01880 I 0.788
ASL5 Vitis vinifera VIT_06s0004g07200 I 0.788
Bostr.29246s0022 Boechera stricta Bostr.29246s0022 I 0.788
OGLUM05G13250 Oryza glumaepatula OGLUM05G13250 I 0.788
MDP0000155138 Malus domestica MDP0000155138 I 0.788
TCM_042212 Theobroma cacao TCM_042212 I 0.788
Pavir.Ca01985 Panicum virgatum Pavir.Ca01985 I 0.788
ONIVA05G13090 Oryza nivara ONIVA05G13090 I 0.788
OMERI05G11330 Oryza meridionalis OMERI05G11330 I 0.788
PGSC0003DMG400023939 Solanum tuberosum PGSC0003DMG400023939 I 0.788
OS05G0346800 Oryza sativa OS05G0346800 I 0.788
gene28202-v1.0-hybrid Fragaria vesca gene28202-v1.0-hybrid I 0.788
ORUFI05G13610 Oryza rufipogon ORUFI05G13610 I 0.788
BGIOSGA018245 Oryza indica BGIOSGA018245 I 0.788
BGIOSGA018244 Oryza indica BGIOSGA018244 I 0.788
PRUPE_ppa012275mg Prunus persica PRUPE_ppa012275mg I 0.788
Gorai.011G290800 Gossypium raimondii Gorai.011G290800 I 0.788
OPUNC05G10670 Oryza punctata OPUNC05G10670 I 0.788
OB05G20740 Oryza brachyantha OB05G20740 I 0.788
Pavir.J21476 Panicum virgatum Pavir.J21476 I 0.788
Pavir.J22399 Panicum virgatum Pavir.J22399 I 0.788
ORUFI01G46340 Oryza rufipogon ORUFI01G46340 I 0.787
GLYMA14G06140 Glycine max GLYMA14G06140 I 0.778
mgf019461m Mimulus guttatus mgf019461m I 0.778
Eucgr.G03089 Eucalyptus grandis Eucgr.G03089 I 0.778
Lus10007525.g Linum usitatissimum Lus10007525.g I 0.778
gene21039-v1.0-hybrid Fragaria vesca gene21039-v1.0-hybrid I 0.778
Pm000193 Prunus mume Pm000193 I 0.778
GSMUA_Achr5G29470_001 Musa acuminata GSMUA_Achr5G29470_001 I 0.778
MDP0000861160 Malus domestica MDP0000861160 I 0.778
Traes_1BL_04EFBAECF Triticum aestivum Traes_1BL_04EFBAECF I 0.778
Traes_1AL_DB7593004 Triticum aestivum Traes_1AL_DB7593004 I 0.778
GSMUA_Achr3G10050_001 Musa acuminata GSMUA_Achr3G10050_001 I 0.778
OBART05G12620 Oryza barthii OBART05G12620 I 0.778
MLOC_54949 Hordeum vulgare MLOC_54949 I 0.778
Gorai.004G234100 Gossypium raimondii Gorai.004G234100 I 0.778
ORGLA05G0108100 Oryza glaberrima ORGLA05G0108100 I 0.778
chr6.CM0738.260.nd Lotus japonicus chr6.CM0738.260.nd I 0.778
MTR_5g083230 Medicago truncatula MTR_5g083230 I 0.768
Bo3g024350 Brassica oleracea Bo3g024350 I 0.768
OMERI01G39870 Oryza meridionalis OMERI01G39870 I 0.768
Pavir.J18260 Panicum virgatum Pavir.J18260 I 0.768
Pavir.J06256 Panicum virgatum Pavir.J06256 I 0.768
Pavir.J13923 Panicum virgatum Pavir.J13923 I 0.768
GSMUA_Achr8G02800_001 Musa acuminata GSMUA_Achr8G02800_001 I 0.768
Ca_12450 Cicer arietinum Ca_12450 I 0.768
Si026864m.g Setaria italica Si026864m.g I 0.768
GSMUA_Achr6G15660_001 Musa acuminata GSMUA_Achr6G15660_001 I 0.768
Bra022780 Brassica rapa Bra022780 I 0.768
GLYMA18G02780 Glycine max GLYMA18G02780 I 0.758
PDK_20s1342451g001 Phoenix dactylifera PDK_20s1342451g001 I 0.758
GLYMA11G29450 Glycine max GLYMA11G29450 I 0.758
Lus10017431.g Linum usitatissimum Lus10017431.g I 0.747
TRIUR3_11082 Triticum urartu TRIUR3_11082 I 0.747
GLYMA18G06530 Glycine max GLYMA18G06530 I 0.747
MLOC_5148 Hordeum vulgare MLOC_5148 I 0.747
GRMZM2G025989 Zea mays GRMZM2G025989 I 0.737
Ca_08998 Cicer arietinum Ca_08998 I 0.737
Traes_5BL_CE4CF3B5C Triticum aestivum Traes_5BL_CE4CF3B5C I 0.737
F775_08326 Aegilops tauschii F775_08326 I 0.737
orange1.1g038565m.g Citrus sinensis orange1.1g038565m.g I 0.727
Gorai.009G112900 Gossypium raimondii Gorai.009G112900 I 0.727
GSMUA_Achr10G14880_001 Musa acuminata GSMUA_Achr10G14880_001 I 0.727
BRADI4G44850 Brachypodium distachyon BRADI4G44850 I 0.727
GSMUA_Achr10G13050_001 Musa acuminata GSMUA_Achr10G13050_001 I 0.727
cassava2872.m1 Manihot esculenta cassava2872.m1 I 0.727
F775_24149 Aegilops tauschii F775_24149 I 0.717
SELMODRAFT_48883 Selaginella moellendorffii SELMODRAFT_48883 I 0.717
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.717
Eucgr.F04424 Eucalyptus grandis Eucgr.F04424 I 0.717
Thhalv10017267m.g Eutrema salsugineum Thhalv10017267m.g I 0.717
TRIUR3_27421 Triticum urartu TRIUR3_27421 I 0.717
Ciclev10016993m.g Citrus clementina Ciclev10016993m.g I 0.717
SELMODRAFT_58936 Selaginella moellendorffii SELMODRAFT_58936 I 0.717
orange1.1g031034m.g Citrus sinensis orange1.1g031034m.g I 0.717
SapurV1A.0059s0540 Salix purpurea SapurV1A.0059s0540 I 0.707
SapurV1A.0094s0480 Salix purpurea SapurV1A.0094s0480 I 0.707
SELMODRAFT_49085 Selaginella moellendorffii SELMODRAFT_49085 I 0.707
LBD4 Vitis vinifera VIT_00s0125g00290 I 0.707
Eucgr.E02016 Eucalyptus grandis Eucgr.E02016 I 0.707
Gorai.011G051200 Gossypium raimondii Gorai.011G051200 I 0.707
Gorai.009G149900 Gossypium raimondii Gorai.009G149900 I 0.707
Lus10040638.g Linum usitatissimum Lus10040638.g I 0.707
TCM_029315 Theobroma cacao TCM_029315 I 0.707
OB12G10480 Oryza brachyantha OB12G10480 I 0.707
POPTR_0001s11610 Populus trichocarpa POPTR_0001s11610 I 0.707
POPTR_0003s14880 Populus trichocarpa POPTR_0003s14880 I 0.707
Si011647m.g Setaria italica Si011647m.g I 0.707
OB11G10200 Oryza brachyantha OB11G10200 I 0.707