Cucsa.250990 (Cucumis sativus)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Cucsa.250990 T246520_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.250990.1 LOB 5 103

Links

Other LOB family TFs
Other Cucumis sativus TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cucsa.161230 Cucumis sativus Cucsa.161230 N 0.879
TCM_035123 Theobroma cacao TCM_035123 N 0.768
POPTR_0012s13910 Populus trichocarpa POPTR_0012s13910 I 0.768
POPTR_0015s13870 Populus trichocarpa POPTR_0015s13870 N 0.758
Pm016263 Prunus mume Pm016263 N 0.758
evm.TU.supercontig_1.339 Carica papaya evm.TU.supercontig_1.339 I 0.758
SapurV1A.0400s0200 Salix purpurea SapurV1A.0400s0200 I 0.747
PRUPE_ppa024504mg Prunus persica PRUPE_ppa024504mg N 0.747
SapurV1A.0068s0590 Salix purpurea SapurV1A.0068s0590 N 0.747
evm.TU.supercontig_1.335 Carica papaya evm.TU.supercontig_1.335 I 0.747
29613.m000372 Ricinus communis 29613.m000372 N 0.737
cassava11118.m1 Manihot esculenta cassava11118.m1 I 0.737
Gorai.009G123600 Gossypium raimondii Gorai.009G123600 N 0.737
cassava35977.valid.m1 Manihot esculenta cassava35977.valid.m1 I 0.717
MDP0000288452 Malus domestica MDP0000288452 N 0.714
gene26806-v1.0-hybrid Fragaria vesca gene26806-v1.0-hybrid N 0.707
Gorai.008G280400 Gossypium raimondii Gorai.008G280400 N 0.707