Cucsa.358620 (Cucumis sativus)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Cucsa.358620 T246532_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.358620.1 LOB 20 64

Links

Other LOB family TFs
Other Cucumis sativus TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
LBD11 Arabidopsis thaliana AT2G28500 N 0.727
Bo5g008590 Brassica oleracea Bo5g008590 N 0.750
Bra018675 Brassica rapa Bra018675 N 0.750
Bra031599 Brassica rapa Bra031599 N 0.727
Bra035698 Brassica rapa Bra035698 N 0.727
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.727
Ca_04287 Cicer arietinum Ca_04287 I 0.750
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.705
orange1.1g047530m.g Citrus sinensis orange1.1g047530m.g I 0.705
Cucsa.330590 Cucumis sativus Cucsa.330590 N 0.776
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.750
Cucsa.062320 Cucumis sativus Cucsa.062320 N 0.735
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.705
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.727
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.727
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.705
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.727
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.727
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.727
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.750
MDP0000879799 Malus domestica MDP0000879799 N 0.750
MDP0000822986 Malus domestica MDP0000822986 I 0.795
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.727
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.727
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.727
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.750
OMERI05G01740 Oryza meridionalis OMERI05G01740 N 0.705
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.705
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.750
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.750
Pm018585 Prunus mume Pm018585 I 0.773
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.727
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.750
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.727
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.750
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.705
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.705
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.773
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.705