CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.454.18.1
(
Physcomitrella patens
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
e_gw1.454.18.1
T246542_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.454.18.1
LOB
3
63
SCNGYRVLRKSCSNTCILRPCLEWIESSDAQGHATIFVAKYFGRAGLMGIISAVHETQRPG
Links
Other
LOB
family TFs
Other
Physcomitrella patens
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo2g168020
Brassica oleracea
Bo2g168020
N
0.768
Cagra.0342s0030
Capsella grandiflora
Cagra.0342s0030
N
0.768
Thhalv10004811m.g
Eutrema salsugineum
Thhalv10004811m.g
N
0.768
LBD37
Arabidopsis lyrata
fgenesh2_kg.8__2670__AT5G67420.1
N
0.768
Bostr.0568s0168
Boechera stricta
Bostr.0568s0168
N
0.768
POPTR_0005s18900
Populus trichocarpa
POPTR_0005s18900
N
0.750
MTR_4g095600
Medicago truncatula
MTR_4g095600
N
0.750
LPERR07G17890
Leersia perrieri
LPERR07G17890
N
0.714
Gorai.007G056300
Gossypium raimondii
Gorai.007G056300
N
0.714