mgf011471m (Mimulus guttatus)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 mgf011471m T246581_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LBD13
M06956_2.00
Arabidopsis thaliana
YGSCGDNDDHNVCGGHG

CDCCGBNDHHNHCGSCR
Dap-seq
OMalley et al.(2016)
LBD13_col_a
0.879 0.879
LBD13
M06957_2.00
Arabidopsis thaliana
CGSCGNNDDWNNCGG

CCGNNWHHNNCGSCG
Dap-seq
OMalley et al.(2016)
LBD13_colamp_a
0.879 0.879
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf011471m LOB 27 125

Links

Other LOB family TFs
Other Mimulus guttatus TFs

182 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Lus10024183.g Linum usitatissimum Lus10024183.g I 0.939
29729.m002335 Ricinus communis 29729.m002335 I 0.929
Lus10009930.g Linum usitatissimum Lus10009930.g I 0.929
PK17217.1 Cannabis sativa PK17217.1 I 0.919
GLYMA14G38280 Glycine max GLYMA14G38280 I 0.919
AMTR_s00007p00227160 Amborella trichopoda AMTR_s00007p00227160 I 0.919
Cucsa.144080 Cucumis sativus Cucsa.144080 I 0.919
Aquca_005_00169 Aquilegia coerulea Aquca_005_00169 I 0.919
evm.TU.supercontig_2.327 Carica papaya evm.TU.supercontig_2.327 I 0.919
cassava15554.m1 Manihot esculenta cassava15554.m1 I 0.909
Bra000188 Brassica rapa Bra000188 I 0.909
cassava20848.m1 Manihot esculenta cassava20848.m1 I 0.909
Gorai.009G295000 Gossypium raimondii Gorai.009G295000 I 0.909
Eucgr.G03121 Eucalyptus grandis Eucgr.G03121 I 0.909
TCM_042262 Theobroma cacao TCM_042262 I 0.909
Solyc06g082430.1 Solanum lycopersicum Solyc06g082430.1 I 0.909
TCM_045438 Theobroma cacao TCM_045438 I 0.909
Bo3g034980 Brassica oleracea Bo3g034980 I 0.909
Cla007391 Citrullus lanatus Cla007391 I 0.909
LBD15 Vitis vinifera VIT_13s0067g02380 I 0.909
evm.TU.supercontig_19.92 Carica papaya evm.TU.supercontig_19.92 I 0.909
GLYMA04G39830 Glycine max GLYMA04G39830 I 0.899
GLYMA02G40080 Glycine max GLYMA02G40080 I 0.899
GLYMA06G15050 Glycine max GLYMA06G15050 I 0.899
29957.m001411 Ricinus communis 29957.m001411 I 0.899
PRUPE_ppa011757mg Prunus persica PRUPE_ppa011757mg I 0.899
Cagra.1642s0010 Capsella grandiflora Cagra.1642s0010 I 0.899
Bostr.23794s0013 Boechera stricta Bostr.23794s0013 I 0.899
Carubv10024002m.g Capsella rubella Carubv10024002m.g I 0.899
LBD15 Arabidopsis lyrata fgenesh2_kg.4__2164__AT2G40470.1 I 0.899
LBD15 Arabidopsis thaliana AT2G40470 I 0.899
Gorai.003G151800 Gossypium raimondii Gorai.003G151800 I 0.899
Gorai.013G005900 Gossypium raimondii Gorai.013G005900 I 0.899
PGSC0003DMG400030461 Solanum tuberosum PGSC0003DMG400030461 I 0.899
Eucgr.B04019 Eucalyptus grandis Eucgr.B04019 I 0.899
Thhalv10017905m.g Eutrema salsugineum Thhalv10017905m.g I 0.889
Bo4g172950 Brassica oleracea Bo4g172950 I 0.889
Bra021627 Brassica rapa Bra021627 I 0.889
LBD13 Arabidopsis lyrata fgenesh2_kg.4__1005__AT2G30340.1 I 0.889
Ca_04126 Cicer arietinum Ca_04126 I 0.889
Bo4g190210 Brassica oleracea Bo4g190210 I 0.889
POPTR_0013s08040 Populus trichocarpa POPTR_0013s08040 I 0.889
mgf020556m Mimulus guttatus mgf020556m I 0.889
gene21311-v1.0-hybrid Fragaria vesca gene21311-v1.0-hybrid I 0.889
Bra016992 Brassica rapa Bra016992 I 0.889
PK03716.1 Cannabis sativa PK03716.1 I 0.882
PRUPE_ppa019397mg Prunus persica PRUPE_ppa019397mg I 0.879
chr1.CM0125.30.nd Lotus japonicus chr1.CM0125.30.nd I 0.879
POPTR_0019s14790 Populus trichocarpa POPTR_0019s14790 I 0.879
MDP0000278334 Malus domestica MDP0000278334 I 0.879
Bostr.24513s0205 Boechera stricta Bostr.24513s0205 I 0.879
Gorai.012G015900 Gossypium raimondii Gorai.012G015900 I 0.879
SapurV1A.0215s0070 Salix purpurea SapurV1A.0215s0070 I 0.879
Thhalv10017073m.g Eutrema salsugineum Thhalv10017073m.g I 0.879
Solyc06g007390.2 Solanum lycopersicum Solyc06g007390.2 I 0.879
MTR_5g075020 Medicago truncatula MTR_5g075020 I 0.879
LBD13 Arabidopsis thaliana AT2G30340 D 0.879
Bo4g059520 Brassica oleracea Bo4g059520 I 0.879
Bo4g012620 Brassica oleracea Bo4g012620 I 0.879
Bra018320 Brassica rapa Bra018320 I 0.879
Bra004572 Brassica rapa Bra004572 I 0.879
orange1.1g027307m.g Citrus sinensis orange1.1g027307m.g I 0.869
PGSC0003DMG400029080 Solanum tuberosum PGSC0003DMG400029080 I 0.869
orange1.1g028221m.g Citrus sinensis orange1.1g028221m.g I 0.869
MTR_5g083960 Medicago truncatula MTR_5g083960 I 0.869
Ciclev10032684m.g Citrus clementina Ciclev10032684m.g I 0.869
Ciclev10002348m.g Citrus clementina Ciclev10002348m.g I 0.869
Pm000277 Prunus mume Pm000277 I 0.869
cassava31953.m1 Manihot esculenta cassava31953.m1 I 0.869
Solyc06g050430.2 Solanum lycopersicum Solyc06g050430.2 I 0.869
GSMUA_Achr11G08330_001 Musa acuminata GSMUA_Achr11G08330_001 I 0.869
chr2.CM1032.110.nc Lotus japonicus chr2.CM1032.110.nc I 0.869
Cagra.0567s0001 Capsella grandiflora Cagra.0567s0001 I 0.869
TRIUR3_18328 Triticum urartu TRIUR3_18328 I 0.863
Cucsa.326100 Cucumis sativus Cucsa.326100 I 0.859
Si012018m.g Setaria italica Si012018m.g I 0.859
SapurV1A.0222s0070 Salix purpurea SapurV1A.0222s0070 I 0.859
F775_25790 Aegilops tauschii F775_25790 I 0.859
POPTR_0013s15220 Populus trichocarpa POPTR_0013s15220 I 0.859
Ca_12420 Cicer arietinum Ca_12420 I 0.859
MLOC_16076 Hordeum vulgare MLOC_16076 I 0.859
MTR_3g094690 Medicago truncatula MTR_3g094690 I 0.859
PGSC0003DMG400020562 Solanum tuberosum PGSC0003DMG400020562 I 0.859
Carubv10024870m.g Capsella rubella Carubv10024870m.g I 0.859
TRIUR3_34193 Triticum urartu TRIUR3_34193 I 0.859
LBD13 Vitis vinifera VIT_06s0004g07790 I 0.859
gw1.9.232.1 Physcomitrella patens gw1.9.232.1 I 0.848
gw1.156.75.1 Physcomitrella patens gw1.156.75.1 I 0.848
LPERR01G30700 Leersia perrieri LPERR01G30700 I 0.848
LPERR05G04040 Leersia perrieri LPERR05G04040 I 0.848
Ca_15642 Cicer arietinum Ca_15642 I 0.848
TRAES3BF078900060CFD_g Triticum aestivum TRAES3BF078900060CFD_g I 0.848
BRADI2G53690 Brachypodium distachyon BRADI2G53690 I 0.848
Si004575m.g Setaria italica Si004575m.g I 0.848
ORUFI01G39050 Oryza rufipogon ORUFI01G39050 I 0.848
ORUFI05G04770 Oryza rufipogon ORUFI05G04770 I 0.848
OS01G0825000 Oryza sativa OS01G0825000 I 0.848
OS05G0165450 Oryza sativa OS05G0165450 I 0.848
ORGLA05G0042200 Oryza glaberrima ORGLA05G0042200 I 0.848
ORGLA01G0294900 Oryza glaberrima ORGLA01G0294900 I 0.848
OMERI01G32750 Oryza meridionalis OMERI01G32750 I 0.848
OMERI05G04500 Oryza meridionalis OMERI05G04500 I 0.848
ONIVA01G40640 Oryza nivara ONIVA01G40640 I 0.848
ONIVA05G04920 Oryza nivara ONIVA05G04920 I 0.848
gene28137-v1.0-hybrid Fragaria vesca gene28137-v1.0-hybrid I 0.848
OLONG_000658 Oryza longistaminata OLONG_000658 I 0.848
BGIOSGA018747 Oryza indica BGIOSGA018747 I 0.848
Sb09g004940 Sorghum bicolor Sb09g004940 I 0.848
Pavir.J00291 Panicum virgatum Pavir.J00291 I 0.848
Pavir.Eb03580 Panicum virgatum Pavir.Eb03580 I 0.848
BGIOSGA004719 Oryza indica BGIOSGA004719 I 0.848
OBART01G35680 Oryza barthii OBART01G35680 I 0.848
OGLUM05G04450 Oryza glumaepatula OGLUM05G04450 I 0.848
OBART05G04570 Oryza barthii OBART05G04570 I 0.848
OGLUM01G39690 Oryza glumaepatula OGLUM01G39690 I 0.848
Bo4g190140 Brassica oleracea Bo4g190140 I 0.842
Pavir.Ca01098 Panicum virgatum Pavir.Ca01098 I 0.838
GRMZM5G868471 Zea mays GRMZM5G868471 I 0.838
GRMZM2G092517 Zea mays GRMZM2G092517 I 0.838
GSMUA_Achr7G22200_001 Musa acuminata GSMUA_Achr7G22200_001 I 0.838
OPUNC01G34540 Oryza punctata OPUNC01G34540 I 0.838
OB01G44400 Oryza brachyantha OB01G44400 I 0.838
Sb03g038410 Sorghum bicolor Sb03g038410 I 0.838
F775_52636 Aegilops tauschii F775_52636 I 0.828
Pavir.Ea03276 Panicum virgatum Pavir.Ea03276 I 0.828
Traes_1DS_BB8508CC6 Triticum aestivum Traes_1DS_BB8508CC6 I 0.828
Traes_1BS_8F922CA93 Triticum aestivum Traes_1BS_8F922CA93 I 0.828
GSMUA_Achr5G07460_001 Musa acuminata GSMUA_Achr5G07460_001 I 0.828
MLOC_56075 Hordeum vulgare MLOC_56075 I 0.828
GSMUA_AchrUn_randomG14060_001 Musa acuminata GSMUA_AchrUn_randomG14060_001 I 0.828
Traes_1AS_43FB6A3CF Triticum aestivum Traes_1AS_43FB6A3CF I 0.828
Lus10029061.g Linum usitatissimum Lus10029061.g I 0.818
SELMODRAFT_26920 Selaginella moellendorffii SELMODRAFT_26920 I 0.818
Lus10034208.g Linum usitatissimum Lus10034208.g I 0.818
SELMODRAFT_37169 Selaginella moellendorffii SELMODRAFT_37169 I 0.818
BRADI2G34520 Brachypodium distachyon BRADI2G34520 I 0.808
PDK_20s1387061g002 Phoenix dactylifera PDK_20s1387061g002 I 0.778
OB05G14280 Oryza brachyantha OB05G14280 I 0.768
OLONG_007328 Oryza longistaminata OLONG_007328 I 0.758
PDK_20s1537041g001 Phoenix dactylifera PDK_20s1537041g001 N 0.746
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.737
mgf026046m Mimulus guttatus mgf026046m I 0.727
Pavir.J18260 Panicum virgatum Pavir.J18260 I 0.717
Pavir.J13923 Panicum virgatum Pavir.J13923 I 0.717
Pavir.J06256 Panicum virgatum Pavir.J06256 I 0.717
PGSC0003DMG400008649 Solanum tuberosum PGSC0003DMG400008649 I 0.717
Cla009336 Citrullus lanatus Cla009336 I 0.717
Sb01g012810 Sorghum bicolor Sb01g012810 I 0.717
LBD3 Vitis vinifera VIT_19s0027g01120 I 0.717
Eucgr.E02016 Eucalyptus grandis Eucgr.E02016 I 0.717
Solyc11g045530.1 Solanum lycopersicum Solyc11g045530.1 I 0.717
Gorai.011G051200 Gossypium raimondii Gorai.011G051200 I 0.717
PDK_20s1448121g001 Phoenix dactylifera PDK_20s1448121g001 N 0.712
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I 0.707
SELMODRAFT_48883 Selaginella moellendorffii SELMODRAFT_48883 I 0.707
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I 0.707
PK11564.1 Cannabis sativa PK11564.1 I 0.707
LBD12 Arabidopsis thaliana AT2G30130 I 0.707
POPTR_0010s19180 Populus trichocarpa POPTR_0010s19180 I 0.707
Bo3g024350 Brassica oleracea Bo3g024350 I 0.707
Lus10018275.g Linum usitatissimum Lus10018275.g I 0.707
MTR_5g083230 Medicago truncatula MTR_5g083230 I 0.707
Bra022780 Brassica rapa Bra022780 I 0.707
Bra021612 Brassica rapa Bra021612 I 0.707
gene30046-v1.0-hybrid Fragaria vesca gene30046-v1.0-hybrid I 0.707
Ciclev10032929m.g Citrus clementina Ciclev10032929m.g I 0.707
Carubv10025543m.g Capsella rubella Carubv10025543m.g I 0.707
Cucsa.118370 Cucumis sativus Cucsa.118370 I 0.707
Cla013678 Citrullus lanatus Cla013678 I 0.707
ASL5 Arabidopsis lyrata fgenesh2_kg.4__983__AT2G30130.1 I 0.707
SELMODRAFT_49084 Selaginella moellendorffii SELMODRAFT_49084 I 0.707
Bra018335 Brassica rapa Bra018335 I 0.707
Si026864m.g Setaria italica Si026864m.g I 0.707
SELMODRAFT_58936 Selaginella moellendorffii SELMODRAFT_58936 I 0.707
SELMODRAFT_49085 Selaginella moellendorffii SELMODRAFT_49085 I 0.707
MDP0000155138 Malus domestica MDP0000155138 I 0.707
Si037583m.g Setaria italica Si037583m.g I 0.707
Bo4g170770 Brassica oleracea Bo4g170770 I 0.707
Cucsa.236600 Cucumis sativus Cucsa.236600 I 0.707
Bo4g059700 Brassica oleracea Bo4g059700 I 0.707
orange1.1g036782m.g Citrus sinensis orange1.1g036782m.g I 0.707
PK29334.1 Cannabis sativa PK29334.1 I 0.703