Bostr.25993s0537 (Boechera stricta)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Bostr.25993s0537 T246687_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LBD30
M01066_2.00
Arabidopsis thaliana
BVWWWHVNGG

CCNBDWWWBV
PBM
Sullivan et al.(2014)
pTH7467
0.707 0.707
LBD30
M01067_2.00
Arabidopsis thaliana
VWWWNVNGGD

HCCNBNWWWB
PBM
Sullivan et al.(2014)
pTH7616
0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.25993s0537.1.p LOB 7 106

Links

Other LOB family TFs
Other Boechera stricta TFs

170 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28428.m000040 Ricinus communis 28428.m000040 I 0.798
29883.m002035 Ricinus communis 29883.m002035 I 0.707
30174.m008898 Ricinus communis 30174.m008898 I 0.707
AC149818.2_FG009 Zea mays AC149818.2_FG009 I 0.768
Aquca_017_00693 Aquilegia coerulea Aquca_017_00693 I 0.798
Aquca_034_00400 Aquilegia coerulea Aquca_034_00400 I 0.768
BGIOSGA005344 Oryza indica BGIOSGA005344 I 0.717
BGIOSGA011445 Oryza indica BGIOSGA011445 I 0.768
BGIOSGA026473 Oryza indica BGIOSGA026473 I 0.798
Bo3g036000 Brassica oleracea Bo3g036000 I 0.720
Bo3g036030 Brassica oleracea Bo3g036030 I 0.707
Bo4g108600 Brassica oleracea Bo4g108600 I 0.838
Bo4g191540 Brassica oleracea Bo4g191540 N 0.899
Bo8g092560 Brassica oleracea Bo8g092560 I 0.869
Bostr.14547s0031 Boechera stricta Bostr.14547s0031 I 0.707
Bostr.20903s0070 Boechera stricta Bostr.20903s0070 I 0.879
Bra000257 Brassica rapa Bra000257 I 0.707
Bra007385 Brassica rapa Bra007385 N 0.838
Bra014581 Brassica rapa Bra014581 I 0.838
Bra016876 Brassica rapa Bra016876 N 0.889
Bra016877 Brassica rapa Bra016877 I 0.707
Bra021737 Brassica rapa Bra021737 N 0.727
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I 0.747
BRADI3G12550 Brachypodium distachyon BRADI3G12550 I 0.778
Cagra.0686s0036 Capsella grandiflora Cagra.0686s0036 I 0.879
Carubv10019250m.g Capsella rubella Carubv10019250m.g I 0.879
Carubv10025067m.g Capsella rubella Carubv10025067m.g N 0.707
cassava28659.m1 Manihot esculenta cassava28659.m1 I 0.717
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I 0.707
cassava40664.m1 Manihot esculenta cassava40664.m1 I 0.808
cassava41632.m1 Manihot esculenta cassava41632.m1 I 0.778
Ca_07763 Cicer arietinum Ca_07763 I 0.828
Ca_12214 Cicer arietinum Ca_12214 I 0.778
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I 0.707
Ciclev10023341m.g Citrus clementina Ciclev10023341m.g I 0.808
Cla006087 Citrullus lanatus Cla006087 I 0.778
Cla006088 Citrullus lanatus Cla006088 I 0.717
Cla015094 Citrullus lanatus Cla015094 I 0.737
Cucsa.053440 Cucumis sativus Cucsa.053440 I 0.717
Cucsa.053450 Cucumis sativus Cucsa.053450 I 0.778
Cucsa.388160 Cucumis sativus Cucsa.388160 I 0.737
Eucgr.B01529 Eucalyptus grandis Eucgr.B01529 I 0.788
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I 0.707
evm.TU.supercontig_50.42 Carica papaya evm.TU.supercontig_50.42 I 0.808
evm.TU.supercontig_50.43 Carica papaya evm.TU.supercontig_50.43 I 0.717
F775_02052 Aegilops tauschii F775_02052 I 0.768
F775_22967 Aegilops tauschii F775_22967 I 0.778
fgenesh1_pg.C_scaffold_4002383 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4002383 N 0.949
gene08253-v1.0-hybrid Fragaria vesca gene08253-v1.0-hybrid I 0.768
gene08254-v1.0-hybrid Fragaria vesca gene08254-v1.0-hybrid I 0.747
GLYMA03G31860 Glycine max GLYMA03G31860 I 0.758
GLYMA10G04050 Glycine max GLYMA10G04050 I 0.808
GLYMA13G18210 Glycine max GLYMA13G18210 I 0.808
GLYMA19G34590 Glycine max GLYMA19G34590 I 0.707
GLYMA19G34600 Glycine max GLYMA19G34600 I 0.758
Gorai.001G251700 Gossypium raimondii Gorai.001G251700 I 0.758
Gorai.004G073200 Gossypium raimondii Gorai.004G073200 I 0.778
Gorai.004G073300 Gossypium raimondii Gorai.004G073300 I 0.798
Gorai.004G220000 Gossypium raimondii Gorai.004G220000 I 0.788
Gorai.007G144400 Gossypium raimondii Gorai.007G144400 I 0.707
Gorai.007G144500 Gossypium raimondii Gorai.007G144500 I 0.808
Gorai.008G114400 Gossypium raimondii Gorai.008G114400 I 0.707
GRMZM2G075499 Zea mays GRMZM2G075499 I 0.717
GRMZM2G076327 Zea mays GRMZM2G076327 I 0.707
GRMZM2G092542 Zea mays GRMZM2G092542 I 0.768
GSMUA_Achr10G06700_001 Musa acuminata GSMUA_Achr10G06700_001 I 0.747
GSMUA_Achr11G02110_001 Musa acuminata GSMUA_Achr11G02110_001 I 0.778
GSMUA_Achr1G01350_001 Musa acuminata GSMUA_Achr1G01350_001 I 0.717
GSMUA_Achr1G01360_001 Musa acuminata GSMUA_Achr1G01360_001 I 0.737
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I 0.717
GSMUA_Achr1G06580_001 Musa acuminata GSMUA_Achr1G06580_001 I 0.758
GSMUA_Achr2G11240_001 Musa acuminata GSMUA_Achr2G11240_001 I 0.707
GSMUA_Achr4G25190_001 Musa acuminata GSMUA_Achr4G25190_001 I 0.758
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I 0.707
GSMUA_Achr8G14330_001 Musa acuminata GSMUA_Achr8G14330_001 I 0.778
GSMUA_AchrUn_randomG07730_001 Musa acuminata GSMUA_AchrUn_randomG07730_001 I 0.778
GSMUA_AchrUn_randomG23710_001 Musa acuminata GSMUA_AchrUn_randomG23710_001 I 0.778
LBD16 Vitis vinifera VIT_07s0005g03030 I 0.717
LBD17 Arabidopsis thaliana AT2G42440 N 0.960
LBD29 Arabidopsis lyrata fgenesh2_kg.5__2263__AT3G58190.1 I 0.859
LBD29 Arabidopsis thaliana AT3G58190 I 0.869
LBD30 Arabidopsis lyrata fgenesh2_kg.6__3680__AT4G00220.1 I 0.707
LBD30 Arabidopsis thaliana AT4G00220 D 0.707
LBD30 Vitis vinifera VIT_15s0048g00830 I 0.707
LjSGA_002536.2 Lotus japonicus LjSGA_002536.2 I 0.707
LjT35F15.90.nd Lotus japonicus LjT35F15.90.nd I 0.778
LPERR03G03470 Leersia perrieri LPERR03G03470 I 0.768
LPERR08G20530 Leersia perrieri LPERR08G20530 I 0.808
Lus10000613.g Linum usitatissimum Lus10000613.g I 0.808
Lus10033872.g Linum usitatissimum Lus10033872.g I 0.707
Lus10033873.g Linum usitatissimum Lus10033873.g I 0.798
MDP0000145761 Malus domestica MDP0000145761 I 0.707
mgf020773m Mimulus guttatus mgf020773m I 0.808
MLOC_10784 Hordeum vulgare MLOC_10784 I 0.747
MLOC_52276 Hordeum vulgare MLOC_52276 I 0.778
MLOC_61947 Hordeum vulgare MLOC_61947 I 0.723
MTR_1g070205 Medicago truncatula MTR_1g070205 I 0.808
MTR_7g096610 Medicago truncatula MTR_7g096610 I 0.778
OB02G44330 Oryza brachyantha OB02G44330 I 0.727
OB03G13890 Oryza brachyantha OB03G13890 I 0.768
OB08G30680 Oryza brachyantha OB08G30680 I 0.818
OBART03G03830 Oryza barthii OBART03G03830 I 0.768
OBART08G23860 Oryza barthii OBART08G23860 I 0.798
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I 0.717
OGLUM03G03710 Oryza glumaepatula OGLUM03G03710 I 0.729
OGLUM08G25340 Oryza glumaepatula OGLUM08G25340 I 0.798
OLONG_001985 Oryza longistaminata OLONG_001985 I 0.700
OLONG_010223 Oryza longistaminata OLONG_010223 I 0.798
OLONG_020841 Oryza longistaminata OLONG_020841 I 0.729
OMERI02G35350 Oryza meridionalis OMERI02G35350 I 0.717
OMERI07G01660 Oryza meridionalis OMERI07G01660 I 0.768
OMERI08G18670 Oryza meridionalis OMERI08G18670 I 0.798
ONIVA02G40360 Oryza nivara ONIVA02G40360 I 0.717
ONIVA03G03580 Oryza nivara ONIVA03G03580 I 0.768
ONIVA09G01330 Oryza nivara ONIVA09G01330 I 0.798
OPUNC02G34750 Oryza punctata OPUNC02G34750 I 0.707
OPUNC03G03520 Oryza punctata OPUNC03G03520 I 0.768
OPUNC08G21770 Oryza punctata OPUNC08G21770 I 0.798
orange1.1g027399m.g Citrus sinensis orange1.1g027399m.g I 0.808
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I 0.707
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I 0.717
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I 0.768
ORGLA08G0192400 Oryza glaberrima ORGLA08G0192400 I 0.798
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I 0.717
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I 0.768
ORUFI08G26340 Oryza rufipogon ORUFI08G26340 I 0.798
OS02G0820500 Oryza sativa OS02G0820500 I 0.717
OS03G0149100 Oryza sativa OS03G0149100 I 0.768
OS08G0563400 Oryza sativa OS08G0563400 I 0.798
Pavir.Aa00097 Panicum virgatum Pavir.Aa00097 I 0.717
Pavir.Fa00011 Panicum virgatum Pavir.Fa00011 I 0.798
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I 0.768
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I 0.768
Pavir.J03376 Panicum virgatum Pavir.J03376 I 0.758
Pavir.J39638 Panicum virgatum Pavir.J39638 I 0.717
PGSC0003DMG400009713 Solanum tuberosum PGSC0003DMG400009713 I 0.717
PGSC0003DMG400009716 Solanum tuberosum PGSC0003DMG400009716 I 0.808
PK23380.1 Cannabis sativa PK23380.1 I 0.806
Pm020627 Prunus mume Pm020627 I 0.758
Pm020628 Prunus mume Pm020628 I 0.788
POPTR_0002s04200 Populus trichocarpa POPTR_0002s04200 I 0.808
POPTR_0002s04210 Populus trichocarpa POPTR_0002s04210 I 0.707
PRUPE_ppa019939mg Prunus persica PRUPE_ppa019939mg I 0.758
PRUPE_ppa025889mg Prunus persica PRUPE_ppa025889mg I 0.788
SapurV1A.0006s0970 Salix purpurea SapurV1A.0006s0970 I 0.798
SapurV1A.0006s0980 Salix purpurea SapurV1A.0006s0980 I 0.707
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I 0.717
SapurV1A.1704s0040 Salix purpurea SapurV1A.1704s0040 I 0.708
Sb01g046990 Sorghum bicolor Sb01g046990 I 0.768
Sb04g037550 Sorghum bicolor Sb04g037550 I 0.717
Sb07g023810 Sorghum bicolor Sb07g023810 I 0.798
Si015156m.g Setaria italica Si015156m.g I 0.798
Si019578m.g Setaria italica Si019578m.g I 0.717
Si040019m.g Setaria italica Si040019m.g I 0.768
Solyc09g066270.2 Solanum lycopersicum Solyc09g066270.2 I 0.798
TCM_004103 Theobroma cacao TCM_004103 I 0.758
TCM_042730 Theobroma cacao TCM_042730 I 0.707
Thhalv10006226m.g Eutrema salsugineum Thhalv10006226m.g I 0.869
Thhalv10017299m.g Eutrema salsugineum Thhalv10017299m.g N 0.717
Thhalv10017903m.g Eutrema salsugineum Thhalv10017903m.g N 0.919
Traes_4AL_BB3F89030 Triticum aestivum Traes_4AL_BB3F89030 N 0.747
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I 0.747
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I 0.747
Traes_4BS_5D9291539 Triticum aestivum Traes_4BS_5D9291539 I 0.778
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I 0.747
Traes_4DS_11C3B0459 Triticum aestivum Traes_4DS_11C3B0459 I 0.778
Traes_6AS_4EEA3E388 Triticum aestivum Traes_6AS_4EEA3E388 I 0.737
Traes_6BS_179B5B6E1 Triticum aestivum Traes_6BS_179B5B6E1 I 0.747
TRIUR3_07751 Triticum urartu TRIUR3_07751 I 0.778
VIT_07s0005g03020 Vitis vinifera VIT_07s0005g03020 I 0.808