Bostr.25993s0537 (Boechera stricta)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Bostr.25993s0537 T246687_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LBD30
M01066_2.00
Arabidopsis thaliana
BVWWWHVNGG

CCNBDWWWBV
PBM
Sullivan et al.(2014)
pTH7467
0.707 0.707
LBD30
M01067_2.00
Arabidopsis thaliana
VWWWNVNGGD

HCCNBNWWWB
PBM
Sullivan et al.(2014)
pTH7616
0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.25993s0537.1.p LOB 7 106

Links

Other LOB family TFs
Other Boechera stricta TFs

170 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O9_05704 Exophiala aquamarina A1O9_05704 N 0.000
ACOM029353 Anopheles coluzzii ACOM029353 I 0.000
Afo_R012670 Aptenodytes forsteri Afo_R012670 N 0.000
ALUE_0000639901 Ascaris lumbricoides ALUE_0000639901 N 0.000
AMEC000538 Anopheles melas AMEC000538 I 0.000
AMEM007694 Anopheles merus AMEM007694 N 0.000
AOL_s00081g337 Arthrobotrys oligospora AOL_s00081g337 N 0.000
BGLB010902 Biomphalaria glabrata BGLB010902 N 0.000
BN7_5034 Wickerhamomyces ciferrii BN7_5034 N 0.000
BOTBODRAFT_575781 Botryobasidium botryosum BOTBODRAFT_575781 N 0.000
Brh_R004116 Buceros rhinoceros Brh_R004116 N 0.000
CC1G_05598 Coprinopsis cinerea CC1G_05598 N 0.000
CFIO01_04514 Colletotrichum fioriniae CFIO01_04514 N 0.000
CNM02020 Cryptococcus neoformans CNM02020 N 0.000
csin108932 Clonorchis sinensis csin108932 I 0.000
D918_08317 Trichuris suis D918_08317 N 0.000
DRE_00029 Drechslerella stenobrocha DRE_00029 N 0.000
EFA85451.1 Polysphondylium pallidum EFA85451.1 N 0.000
ENSAPLG00000010204 Anas platyrhynchos ENSAPLG00000010204 N 0.000
ENSBTAP00000027633-D1 Bos grunniens ENSBTAP00000027633-D1 I 0.000
ENSLOCG00000011834 Lepisosteus oculatus ENSLOCG00000011834 I 0.000
ENSMGAG00000006624 Meleagris gallopavo ENSMGAG00000006624 N 0.000
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I 0.000
ENSOANG00000011188 Ornithorhynchus anatinus ENSOANG00000011188 I 0.000
ENSOARG00000000906 Ovis aries ENSOARG00000000906 I 0.000
ENSP00000322568 Macaca fascicularis ENSP00000322568 I 0.000
ENSPANG00000005859 Papio anubis ENSPANG00000005859 I 0.000
ENSSTOG00000011011 Ictidomys tridecemlineatus ENSSTOG00000011011 I 0.000
fgenesh1_pg.C_scaffold_11000031 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000031 N 0.000
GL15054 Drosophila persimilis FBgn0152658 N 0.000
GLOINDRAFT_25375 Rhizophagus irregularis GLOINDRAFT_25375 N 0.000
GLOINDRAFT_323774 Rhizophagus irregularis GLOINDRAFT_323774 N 0.000
GLOINDRAFT_346686 Rhizophagus irregularis GLOINDRAFT_346686 N 0.000
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N 0.000
GLOTRDRAFT_8101 Gloeophyllum trabeum GLOTRDRAFT_8101 N 0.000
GPLIN_000596700 Globodera pallida GPLIN_000596700 I 0.000
GPLIN_000970900 Globodera pallida GPLIN_000970900 N 0.000
GPUH_0000499601 Gongylonema pulchrum GPUH_0000499601 N 0.000
GYMLUDRAFT_143012 Gymnopus luxurians GYMLUDRAFT_143012 N 0.000
H072_9933 Dactylellina haptotyla H072_9933 N 0.000
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N 0.000
HHAL001583-PA Halyomorpha halys HHAL001583-PA N 0.000
HMEL002398 Heliconius melpomene HMEL002398 I 0.000
Hsal_05005--XP_001122373.1_APIME Harpegnathos saltator Hsal_05005--XP_001122373.1_APIME N 0.000
HYDPIDRAFT_51400 Hydnomerulius pinastri HYDPIDRAFT_51400 N 0.000
K443DRAFT_58201 Laccaria amethystina K443DRAFT_58201 N 0.000
L798_00185 Zootermopsis nevadensis L798_00185 N 0.000
L798_05432 Zootermopsis nevadensis L798_05432 N 0.000
LACBIDRAFT_169971 Laccaria bicolor LACBIDRAFT_169971 N 0.000
LACBIDRAFT_333050 Laccaria bicolor LACBIDRAFT_333050 N 0.000
LCUP001586 Lucilia cuprina LCUP001586 N 0.000
LDEC007550 Leptinotarsa decemlineata LDEC007550 N 0.000
LDEC019307 Leptinotarsa decemlineata LDEC019307 N 0.000
MESCA006188 Megaselia scalaris MESCA006188 N 0.000
MESCA006364 Megaselia scalaris MESCA006364 N 0.000
MESCA012239 Megaselia scalaris MESCA012239 I 0.000
Myotis_brandtii_SOX2_10019709 Myotis brandtii Myotis_brandtii_SOX2_10019709 I 0.000
Ogr08337 Ophisaurus gracilis Ogr08337 N 0.000
PDIP_33190 Penicillium digitatum PDIP_33190 N 0.000
PEX1_064750 Penicillium expansum PEX1_064750 N 0.000
PFICI_02946 Pestalotiopsis fici PFICI_02946 N 0.000
PLEOSDRAFT_1017219 Pleurotus ostreatus PLEOSDRAFT_1017219 N 0.000
PLICRDRAFT_78649 Plicaturopsis crispa PLICRDRAFT_78649 N 0.000
POSPLDRAFT_103238 Postia placenta POSPLDRAFT_103238 N 0.000
POSPLDRAFT_104634 Postia placenta POSPLDRAFT_104634 N 0.000
PPAI003639 Phlebotomus papatasi PPAI003639 N 0.000
PredSwiss_ASS2010_3779.1 Pneumocystis carinii PredSwiss_ASS2010_3779.1 N 0.000
PredSwiss_CON1835.1 Pneumocystis carinii PredSwiss_CON1835.1 N 0.000
PSEUBRA_SCAF2g02551 Pseudozyma brasiliensis PSEUBRA_SCAF2g02551 N 0.000
PTTG_00444 Puccinia triticina PTTG_00444 N 0.000
PXEA_0000763901 Protopolystoma xenopodis PXEA_0000763901 N 0.000
PXEA_0002992801 Protopolystoma xenopodis PXEA_0002992801 N 0.000
RPRC001038 Rhodnius prolixus RPRC001038 N 0.000
RPRC013413 Rhodnius prolixus RPRC013413 N 0.000
SCLCIDRAFT_59496 Scleroderma citrinum SCLCIDRAFT_59496 N 0.000
SERLA73DRAFT_139986 Serpula lacrymans SERLA73DRAFT_139986 N 0.000
Sjc_0107520 Schistosoma japonicum Sjc_0107520 N 0.000
SMU15030186 Schmidtea mediterranea SMU15030186 N 0.000
sox-2 Caenorhabditis elegans WBGene00004949 I 0.000
SOX12 Dasypus novemcinctus ENSDNOG00000044763 N 0.000
SOX18 Dasypus novemcinctus ENSDNOG00000036237 N 0.000
SOX18 Callithrix jacchus ENSCJAG00000022379 N 0.000
SOX2 Felis catus ENSFCAG00000029205 I 0.000
SOX2 Procavia capensis ENSPCAG00000003690 I 0.000
SOX8 Equus caballus ENSECAG00000016320 I 0.000
sox9a Tetraodon nigroviridis ENSTNIG00000001901 N 0.000
SPER_0001708101 Spirometra erinaceieuropaei SPER_0001708101 N 0.000
SPER_0001952401 Spirometra erinaceieuropaei SPER_0001952401 N 0.000
T265_14506 Opisthorchis viverrini T265_14506 I 0.000
TCF7L2 Homo sapiens ENSG00000148737 D 0.000
TMUE_s0015010800 Trichuris muris TMUE_s0015010800 N 0.000
TRE_0000259001 Trichobilharzia regenti TRE_0000259001 N 0.000
TTAC_0001064401 Hydatigera taeniaeformis TTAC_0001064401 N 0.000
TVAG_390840 Trichomonas vaginalis TVAG_390840 N 0.000
UCREL1_237 Eutypa lata UCREL1_237 N 0.000
UCREL1_469 Eutypa lata UCREL1_469 N 0.000
UCREL1_749 Eutypa lata UCREL1_749 N 0.000
WALSEDRAFT_27096 Wallemia sebi WALSEDRAFT_27096 N 0.000
WALSEDRAFT_59420 Wallemia sebi WALSEDRAFT_59420 N 0.000
XP_002935940 Xenopus tropicalis XP_002935940 N 0.000
YQE_08562 Dendroctonus ponderosae YQE_08562 N 0.000