TF Information

Cagra.1261s0013 *(Capsella grandiflora)* LOB
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF03195 (DUF260)	IPR004883	Cagra.1261s0013	T246721_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
LBD19 M06960_2.00	Arabidopsis thaliana	CCKKAAAWHMMGSND	HNSCKKDWTTTMMGG	Dap-seq OMalley et al.(2016) LBD19_col_a	0.778	0.778
LBD19 M06961_2.00	Arabidopsis thaliana	WWYCCGG	CCGGRWW	Dap-seq OMalley et al.(2016) LBD19_colamp_a	0.778	0.778
LBD18 M06962_2.00	Arabidopsis thaliana	SCGGRRAWHVHGSMRNNDN	NHNNYKSCDBDWTYYCCGS	Dap-seq OMalley et al.(2016) LBD18_col_a	0.758	0.758
LBD18 M06963_2.00	Arabidopsis thaliana	CDBDWTTTMHGSHRN	NYDSCDKAAAWHVHG	Dap-seq OMalley et al.(2016) LBD18_colamp_a	0.758	0.758
LBD30 M01066_2.00	Arabidopsis thaliana	BVWWWHVNGG	CCNBDWWWBV	PBM Sullivan et al.(2014) pTH7467	0.707	0.707
LBD30 M01067_2.00	Arabidopsis thaliana	VWWWNVNGGD	HCCNBNWWWB	PBM Sullivan et al.(2014) pTH7616	0.707	0.707
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Cagra.1261s0013.1.p	LOB	11	110	PCGACKFLRRKCVSECIFAPYFDSEEGTSHFAAVHKVFGASNASKLLMMIPASRRLDAVVTLSYEALARLRDPVYGCVGHIFALQHQVMNLQAELAYVQT

Links
Other LOB family TFs
Other *Capsella grandiflora* TFs

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233 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action