Ciclev10032782m.g (Citrus clementina)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Ciclev10032782m.g T246825_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10032782m LOB 42 140

Links

Other LOB family TFs
Other Citrus clementina TFs

175 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.909
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.909
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.899
GLYMA20G31780 Glycine max GLYMA20G31780 I 0.899
Ca_04287 Cicer arietinum Ca_04287 I 0.899
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.899
CM1887.100.nc Lotus japonicus CM1887.100.nc I 0.899
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.889
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.889
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.889
Eucgr.J01123 Eucalyptus grandis Eucgr.J01123 I 0.889
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.889
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.889
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.879
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I 0.879
GLYMA13G40370 Glycine max GLYMA13G40370 I 0.879
PK23777.1 Cannabis sativa PK23777.1 I 0.879
Ca_14605 Cicer arietinum Ca_14605 I 0.879
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I 0.879
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.879
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.879
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.869
Gorai.001G129700 Gossypium raimondii Gorai.001G129700 I 0.869
TCM_043081 Theobroma cacao TCM_043081 I 0.869
PK27389.1 Cannabis sativa PK27389.1 I 0.869
gene25294-v1.0-hybrid Fragaria vesca gene25294-v1.0-hybrid I 0.869
TCM_041094 Theobroma cacao TCM_041094 I 0.869
MDP0000319331 Malus domestica MDP0000319331 I 0.869
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.869
Cla020379 Citrullus lanatus Cla020379 I 0.869
Pm000938 Prunus mume Pm000938 I 0.869
30111.m000703 Ricinus communis 30111.m000703 I 0.869
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.869
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.869
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.869
evm.TU.supercontig_53.26 Carica papaya evm.TU.supercontig_53.26 N 0.859
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.859
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.859
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.859
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.859
Eucgr.B02465 Eucalyptus grandis Eucgr.B02465 I 0.859
MTR_2g093310 Medicago truncatula MTR_2g093310 I 0.859
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.859
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.859
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I 0.859
MDP0000218986 Malus domestica MDP0000218986 I 0.848
Pm018585 Prunus mume Pm018585 I 0.848
Cla000556 Citrullus lanatus Cla000556 I 0.848
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.848
MDP0000318244 Malus domestica MDP0000318244 I 0.848
Solyc11g072470.1 Solanum lycopersicum Solyc11g072470.1 I 0.848
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.848
Bostr.25219s0157 Boechera stricta Bostr.25219s0157 N 0.848
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.848
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.848
mgf022524m Mimulus guttatus mgf022524m N 0.848
MDP0000123013 Malus domestica MDP0000123013 I 0.848
MDP0000151784 Malus domestica MDP0000151784 I 0.848
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.838
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.838
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.838
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I 0.838
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.838
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.838
Cagra.1671s0410 Capsella grandiflora Cagra.1671s0410 N 0.838
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.838
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N 0.838
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.838
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.828
mgf019622m Mimulus guttatus mgf019622m N 0.828
Carubv10023989m.g Capsella rubella Carubv10023989m.g N 0.828
GSMUA_Achr7G15500_001 Musa acuminata GSMUA_Achr7G15500_001 I 0.828
Bo01039s010 Brassica oleracea Bo01039s010 N 0.828
PGSC0003DMG400004138 Solanum tuberosum PGSC0003DMG400004138 N 0.828
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N 0.828
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.828
GSMUA_Achr10G22970_001 Musa acuminata GSMUA_Achr10G22970_001 I 0.828
Bo8g112780 Brassica oleracea Bo8g112780 N 0.828
Cagra.9128s0007 Capsella grandiflora Cagra.9128s0007 N 0.828
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.828
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N 0.828
evm.TU.contig_40341.1 Carica papaya evm.TU.contig_40341.1 I 0.821
Bra018675 Brassica rapa Bra018675 N 0.818
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.818
OB05G11740 Oryza brachyantha OB05G11740 I 0.818
Bra031599 Brassica rapa Bra031599 N 0.818
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.818
Bra035698 Brassica rapa Bra035698 N 0.818
Bra011942 Brassica rapa Bra011942 N 0.818
Bo5g008590 Brassica oleracea Bo5g008590 N 0.818
AMTR_s00080p00153120 Amborella trichopoda AMTR_s00080p00153120 N 0.818
mgf015666m Mimulus guttatus mgf015666m N 0.818
LBD11 Arabidopsis thaliana AT2G28500 N 0.818
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.818
Bo4g165420 Brassica oleracea Bo4g165420 N 0.818
MDP0000879799 Malus domestica MDP0000879799 N 0.818
Gorai.012G185900 Gossypium raimondii Gorai.012G185900 N 0.811
cassava16668.m1 Manihot esculenta cassava16668.m1 N 0.809
ORGLA05G0016500 Oryza glaberrima ORGLA05G0016500 N 0.808
Bra000491 Brassica rapa Bra000491 N 0.808
orange1.1g045080m.g Citrus sinensis orange1.1g045080m.g I 0.808
Bo3g040220 Brassica oleracea Bo3g040220 N 0.808
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.808
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.808
Ciclev10032772m.g Citrus clementina Ciclev10032772m.g I 0.808
MDP0000822986 Malus domestica MDP0000822986 I 0.808
Cla005134 Citrullus lanatus Cla005134 N 0.808
OPUNC05G01610 Oryza punctata OPUNC05G01610 N 0.804
Eucgr.E02410 Eucalyptus grandis Eucgr.E02410 N 0.800
Pavir.J04684 Panicum virgatum Pavir.J04684 I 0.798
VIT_13s0019g03750 Vitis vinifera VIT_13s0019g03750 N 0.798
GRMZM2G165805 Zea mays GRMZM2G165805 N 0.798
GSMUA_Achr8G09700_001 Musa acuminata GSMUA_Achr8G09700_001 N 0.798
Pavir.Ca00718 Panicum virgatum Pavir.Ca00718 I 0.798
Ca_02507 Cicer arietinum Ca_02507 N 0.798
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I 0.798
OBART05G01640 Oryza barthii OBART05G01640 N 0.788
Solyc06g075330.1 Solanum lycopersicum Solyc06g075330.1 N 0.784
VIT_13s0019g03800 Vitis vinifera VIT_13s0019g03800 N 0.782
GRMZM2G021095 Zea mays GRMZM2G021095 N 0.778
Cucsa.207400 Cucumis sativus Cucsa.207400 N 0.778
Pavir.Ia03612 Panicum virgatum Pavir.Ia03612 N 0.778
Sb01g038650 Sorghum bicolor Sb01g038650 N 0.778
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.778
Cla005133 Citrullus lanatus Cla005133 N 0.778
PDK_20s1376911g004 Phoenix dactylifera PDK_20s1376911g004 I 0.778
Si024430m.g Setaria italica Si024430m.g N 0.778
ONIVA03G14510 Oryza nivara ONIVA03G14510 N 0.768
OPUNC03G12790 Oryza punctata OPUNC03G12790 N 0.768
OMERI03G12370 Oryza meridionalis OMERI03G12370 N 0.768
MLOC_68570 Hordeum vulgare MLOC_68570 N 0.768
BGIOSGA038947 Oryza indica BGIOSGA038947 N 0.768
BGIOSGA010952 Oryza indica BGIOSGA010952 N 0.768
GRMZM2G145568 Zea mays GRMZM2G145568 N 0.768
ORGLA03G0128100 Oryza glaberrima ORGLA03G0128100 N 0.768
OBART03G13260 Oryza barthii OBART03G13260 N 0.768
OGLUM03G13350 Oryza glumaepatula OGLUM03G13350 N 0.768
OS03G0287400 Oryza sativa OS03G0287400 N 0.768
Traes_1BS_CE38938A8 Triticum aestivum Traes_1BS_CE38938A8 N 0.768
ORUFI03G13900 Oryza rufipogon ORUFI03G13900 N 0.768
Traes_1AS_26CB95294 Triticum aestivum Traes_1AS_26CB95294 N 0.768
Traes_1DS_A31FB6CB2 Triticum aestivum Traes_1DS_A31FB6CB2 N 0.768
evm.TU.contig_40341.2 Carica papaya evm.TU.contig_40341.2 N 0.761
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.758
Cucsa.207390 Cucumis sativus Cucsa.207390 N 0.758
Si037280m.g Setaria italica Si037280m.g N 0.758
GSMUA_Achr3G17800_001 Musa acuminata GSMUA_Achr3G17800_001 N 0.758
OB03G23270 Oryza brachyantha OB03G23270 N 0.758
VIT_13s0019g03830 Vitis vinifera VIT_13s0019g03830 N 0.747
Traes_4BL_97EDABD02 Triticum aestivum Traes_4BL_97EDABD02 N 0.747
F775_02335 Aegilops tauschii F775_02335 N 0.747
VIT_13s0019g03760 Vitis vinifera VIT_13s0019g03760 N 0.747
VIT_13s0019g03710 Vitis vinifera VIT_13s0019g03710 N 0.737
VIT_13s0019g03810 Vitis vinifera VIT_13s0019g03810 N 0.737
Traes_4AS_669BAF6C7 Triticum aestivum Traes_4AS_669BAF6C7 N 0.737
ORUFI05G01750 Oryza rufipogon ORUFI05G01750 I 0.737
OS05G0123000 Oryza sativa OS05G0123000 I 0.737
LPERR03G11720 Leersia perrieri LPERR03G11720 N 0.737
BGIOSGA018905 Oryza indica BGIOSGA018905 I 0.737
PK17019.1 Cannabis sativa PK17019.1 I 0.735
GSMUA_Achr4G16790_001 Musa acuminata GSMUA_Achr4G16790_001 N 0.727
BRADI1G65760 Brachypodium distachyon BRADI1G65760 N 0.727
VIT_13s0019g03720 Vitis vinifera VIT_13s0019g03720 N 0.727
GSMUA_Achr9G04330_001 Musa acuminata GSMUA_Achr9G04330_001 N 0.717
PGSC0003DMG400025384 Solanum tuberosum PGSC0003DMG400025384 N 0.717
VIT_13s0019g03820 Vitis vinifera VIT_13s0019g03820 N 0.717
VIT_13s0019g03780 Vitis vinifera VIT_13s0019g03780 N 0.717
OPUNC05G01600 Oryza punctata OPUNC05G01600 N 0.712
Cucsa.275710 Cucumis sativus Cucsa.275710 N 0.707
ONIVA05G01850 Oryza nivara ONIVA05G01850 I 0.707
VIT_13s0019g03840 Vitis vinifera VIT_13s0019g03840 N 0.707
Lus10031191.g Linum usitatissimum Lus10031191.g I 0.707
Cucsa.358620 Cucumis sativus Cucsa.358620 N 0.705
evm.TU.supercontig_331.6 Carica papaya evm.TU.supercontig_331.6 I 0.702
OMERI05G01730 Oryza meridionalis OMERI05G01730 N 0.700