Eucgr.A02814 (Eucalyptus grandis)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Eucgr.A02814 T246831_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD23
M06964_2.00 		Arabidopsis thaliana
NGCGNDRAWNNCGCN
NGCGNNWTYHNCGCN		 Dap-seq
OMalley et al.(2016)
LBD23_col_a 		0.707 0.707
LBD23
M06965_2.00 		Arabidopsis thaliana
DGCGDDRRWNNCGCN
NGCGNNWYYHHCGCH		 Dap-seq
OMalley et al.(2016)
LBD23_colamp_a 		0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.A02814.1 LOB 7 105

Links

Other LOB family TFs
Other Eucalyptus grandis TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava11118.m1 Manihot esculenta cassava11118.m1 I 0.798
29613.m000372 Ricinus communis 29613.m000372 N 0.798
POPTR_0012s13910 Populus trichocarpa POPTR_0012s13910 I 0.788
SapurV1A.0400s0200 Salix purpurea SapurV1A.0400s0200 I 0.768
cassava35977.valid.m1 Manihot esculenta cassava35977.valid.m1 I 0.768
POPTR_0015s13870 Populus trichocarpa POPTR_0015s13870 N 0.758
evm.TU.supercontig_1.339 Carica papaya evm.TU.supercontig_1.339 I 0.758
SapurV1A.0068s0590 Salix purpurea SapurV1A.0068s0590 N 0.747
TCM_035123 Theobroma cacao TCM_035123 N 0.747
evm.TU.supercontig_1.335 Carica papaya evm.TU.supercontig_1.335 I 0.747
Cagra.3598s0013 Capsella grandiflora Cagra.3598s0013 I 0.727
Carubv10018979m.g Capsella rubella Carubv10018979m.g I 0.727
Ca_16884 Cicer arietinum Ca_16884 N 0.727
MTR_7g028905 Medicago truncatula MTR_7g028905 N 0.717
VIT_16s0100g00440 Vitis vinifera VIT_16s0100g00440 N 0.717
Gorai.009G123600 Gossypium raimondii Gorai.009G123600 N 0.717
LBD24 Arabidopsis thaliana AT3G26660 I 0.707
LBD23 Arabidopsis thaliana AT3G26620 D 0.707
GLYMA14G02440 Glycine max GLYMA14G02440 N 0.707
gene26806-v1.0-hybrid Fragaria vesca gene26806-v1.0-hybrid N 0.707