Eucgr.G03121 (Eucalyptus grandis)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Eucgr.G03121 T246853_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LBD13
M06956_2.00
Arabidopsis thaliana
YGSCGDNDDHNVCGGHG

CDCCGBNDHHNHCGSCR
Dap-seq
OMalley et al.(2016)
LBD13_col_a
0.859 0.859
LBD13
M06957_2.00
Arabidopsis thaliana
CGSCGNNDDWNNCGG

CCGNNWHHNNCGSCG
Dap-seq
OMalley et al.(2016)
LBD13_colamp_a
0.859 0.859
LBD4
M02261_2.00
Arabidopsis thaliana
VDNVCGSNNN

NNNSCGBNHB
PBM
Weirauch et al.(2014)
pTH7515
0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.G03121.1 LOB 45 143

Links

Other LOB family TFs
Other Eucalyptus grandis TFs

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ARB_03015 Arthroderma benhamiae ARB_03015 I 0.000
BDDG_06193 Blastomyces dermatitidis BDDG_06193 I 0.000
PVAR5_6880 Byssochlamys spectabilis PVAR5_6880 I 0.000
A1O1_02670 Capronia coronata A1O1_02670 I 0.000
A1O3_05241 Capronia epimyces A1O3_05241 I 0.000
PV04_09333 Capronia semiimmersa PV04_09333 I 0.000
Z519_08538 Cladophialophora bantiana Z519_08538 I 0.000
G647_07724 Cladophialophora carrionii G647_07724 I 0.000
PV07_00458 Cladophialophora immunda PV07_00458 I 0.000
A1O5_01272 Cladophialophora psammophila A1O5_01272 I 0.000
A1O7_08749 Cladophialophora yegresii A1O7_08749 I 0.000
CIMG_00672 Coccidioides immitis CIMG_00672 I 0.000
CPC735_055980 Coccidioides posadasii CPC735_055980 I 0.000
e_gw1.3.1365.1 Cryphonectria parasitica e_gw1.3.1365.1 I 0.000
A1O9_09993 Exophiala aquamarina A1O9_09993 I 0.000
PV10_04981 Exophiala mesophila PV10_04981 I 0.000
PV06_08141 Exophiala oligosperma PV06_08141 I 0.000
PV06_05113 Exophiala oligosperma PV06_05113 I 0.000
PV11_02421 Exophiala sideris PV11_02421 I 0.000
PV08_06966 Exophiala spinifera PV08_06966 I 0.000
PV08_09084 Exophiala spinifera PV08_09084 I 0.000
PV05_00782 Exophiala xenobiotica PV05_00782 I 0.000
Z517_01546 Fonsecaea pedrosoi Z517_01546 I 0.000
HCBG_04888 Histoplasma capsulatum HCBG_04888 I 0.000
MCYG_03627 Microsporum canis MCYG_03627 I 0.000
MGYG_03225 Microsporum gypseum MGYG_03225 I 0.000
OIDMADRAFT_42277 Oidiodendron maius OIDMADRAFT_42277 I 0.000
PABG_04832 Paracoccidioides brasiliensis PABG_04832 I 0.000
PAAG_02331 Paracoccidioides sp lutzii PAAG_02331 I 0.000
Z518_05201 Rhinocladiella mackenziei Z518_05201 I 0.000
SMAC_03743 Sordaria macrospora SMAC_03743 I 0.000
S40288_05491 Stachybotrys chartarum S40288_05491 I 0.000
S40285_03475 Stachybotrys chlorohalonata S40285_03475 I 0.000
TRIREDRAFT_53106 Trichoderma reesei TRIREDRAFT_53106 I 0.000
TRIVIDRAFT_133401 Trichoderma virens TRIVIDRAFT_133401 I 0.000
TEQG_01335 Trichophyton equinum TEQG_01335 I 0.000
H101_04164 Trichophyton interdigitale H101_04164 I 0.000
H102_03722 Trichophyton rubrum H102_03722 I 0.000
H105_03749 Trichophyton soudanense H105_03749 I 0.000
TESG_05486 Trichophyton tonsurans TESG_05486 I 0.000
TRV_01730 Trichophyton verrucosum TRV_01730 I 0.000
UREG_00669 Uncinocarpus reesii UREG_00669 I 0.000